Guide to the Human Genome
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Search of human proteins with 61742789

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo
sapiens]
         (277 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]    559   e-160
gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]    559   e-160
gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]    559   e-160
gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]    559   e-160
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]                       70   3e-12
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]                       70   3e-12
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]                       70   3e-12
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]                        70   3e-12
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]                       70   3e-12
gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens]           58   8e-09
gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens]           58   8e-09
gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens]           57   2e-08
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ...    54   1e-07
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ...    54   1e-07
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    39   0.007
gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapi...    38   0.011
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex...    37   0.019
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof...    37   0.019
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof...    37   0.019
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof...    37   0.019
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof...    37   0.019
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof...    37   0.019
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof...    37   0.019
gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]     37   0.025
gi|56549694 enabled homolog isoform a [Homo sapiens]                   36   0.032
gi|39930375 enabled homolog isoform b [Homo sapiens]                   36   0.032
gi|24431975 hypothetical protein LOC26148 [Homo sapiens]               36   0.042
gi|21735415 centromere protein B [Homo sapiens]                        35   0.055
gi|47578107 delangin isoform B [Homo sapiens]                          35   0.055
gi|47578105 delangin isoform A [Homo sapiens]                          35   0.055

>gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score =  559 bits (1441), Expect = e-160
 Identities = 277/277 (100%), Positives = 277/277 (100%)

Query: 1   MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
           MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL
Sbjct: 1   MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60

Query: 61  HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
           HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE
Sbjct: 61  HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120

Query: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
           GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG
Sbjct: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180

Query: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
           RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG
Sbjct: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240

Query: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
           SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP
Sbjct: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277


>gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score =  559 bits (1441), Expect = e-160
 Identities = 277/277 (100%), Positives = 277/277 (100%)

Query: 1   MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
           MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL
Sbjct: 1   MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60

Query: 61  HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
           HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE
Sbjct: 61  HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120

Query: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
           GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG
Sbjct: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180

Query: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
           RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG
Sbjct: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240

Query: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
           SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP
Sbjct: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277


>gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score =  559 bits (1441), Expect = e-160
 Identities = 277/277 (100%), Positives = 277/277 (100%)

Query: 1   MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
           MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL
Sbjct: 1   MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60

Query: 61  HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
           HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE
Sbjct: 61  HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120

Query: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
           GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG
Sbjct: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180

Query: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
           RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG
Sbjct: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240

Query: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
           SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP
Sbjct: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277


>gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]
          Length = 339

 Score =  559 bits (1441), Expect = e-160
 Identities = 277/277 (100%), Positives = 277/277 (100%)

Query: 1   MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
           MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL
Sbjct: 63  MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 122

Query: 61  HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
           HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE
Sbjct: 123 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 182

Query: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
           GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG
Sbjct: 183 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 242

Query: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
           RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG
Sbjct: 243 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 302

Query: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
           SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP
Sbjct: 303 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 339


>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
          Length = 532

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)

Query: 30  QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
           ++ EGA          + R   GE E        +K+    + LEEL   +E        
Sbjct: 261 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 320

Query: 84  GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
             +   Q+       EEE++       E ++ +       +  +G  +   P     P  
Sbjct: 321 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 380

Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
            + K+ +R E LN+S++KS+ VK +     +SKID  LEQYT AIE T    P     + 
Sbjct: 381 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 440

Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
           + +P+  V + KS WE G V  + +AA TP+ +                           
Sbjct: 441 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 500

Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
               D+  GD+ SK++LWE++   K +S  K
Sbjct: 501 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 531


>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
          Length = 558

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)

Query: 30  QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
           ++ EGA          + R   GE E        +K+    + LEEL   +E        
Sbjct: 287 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 346

Query: 84  GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
             +   Q+       EEE++       E ++ +       +  +G  +   P     P  
Sbjct: 347 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 406

Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
            + K+ +R E LN+S++KS+ VK +     +SKID  LEQYT AIE T    P     + 
Sbjct: 407 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 466

Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
           + +P+  V + KS WE G V  + +AA TP+ +                           
Sbjct: 467 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 526

Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
               D+  GD+ SK++LWE++   K +S  K
Sbjct: 527 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 557


>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
          Length = 564

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)

Query: 30  QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
           ++ EGA          + R   GE E        +K+    + LEEL   +E        
Sbjct: 293 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 352

Query: 84  GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
             +   Q+       EEE++       E ++ +       +  +G  +   P     P  
Sbjct: 353 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 412

Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
            + K+ +R E LN+S++KS+ VK +     +SKID  LEQYT AIE T    P     + 
Sbjct: 413 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 472

Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
           + +P+  V + KS WE G V  + +AA TP+ +                           
Sbjct: 473 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 532

Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
               D+  GD+ SK++LWE++   K +S  K
Sbjct: 533 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 563


>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
          Length = 538

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)

Query: 30  QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
           ++ EGA          + R   GE E        +K+    + LEEL   +E        
Sbjct: 267 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 326

Query: 84  GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
             +   Q+       EEE++       E ++ +       +  +G  +   P     P  
Sbjct: 327 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 386

Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
            + K+ +R E LN+S++KS+ VK +     +SKID  LEQYT AIE T    P     + 
Sbjct: 387 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 446

Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
           + +P+  V + KS WE G V  + +AA TP+ +                           
Sbjct: 447 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 506

Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
               D+  GD+ SK++LWE++   K +S  K
Sbjct: 507 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 537


>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
          Length = 793

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)

Query: 30  QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
           ++ EGA          + R   GE E        +K+    + LEEL   +E        
Sbjct: 522 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 581

Query: 84  GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
             +   Q+       EEE++       E ++ +       +  +G  +   P     P  
Sbjct: 582 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 641

Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
            + K+ +R E LN+S++KS+ VK +     +SKID  LEQYT AIE T    P     + 
Sbjct: 642 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 701

Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
           + +P+  V + KS WE G V  + +AA TP+ +                           
Sbjct: 702 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 761

Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
               D+  GD+ SK++LWE++   K +S  K
Sbjct: 762 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 792


>gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens]
          Length = 127

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 28/31 (90%), Positives = 29/31 (93%)

Query: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
           MAVASTKSRWETGEVQAQSAAKTPSCK  +A
Sbjct: 1   MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31


>gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens]
          Length = 127

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 28/31 (90%), Positives = 29/31 (93%)

Query: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
           MAVASTKSRWETGEVQAQSAAKTPSCK  +A
Sbjct: 1   MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31


>gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens]
          Length = 127

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 27/31 (87%), Positives = 28/31 (90%)

Query: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
           MAVASTKSRWETGEVQAQSA KTPSCK  +A
Sbjct: 1   MAVASTKSRWETGEVQAQSATKTPSCKAQIA 31


>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
           [Homo sapiens]
          Length = 916

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 38/273 (13%)

Query: 1   MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
           + +S+K  +    +E E      + PE  ++   A+ +      P+ +  EGE+E+  G 
Sbjct: 480 LAVSMKEEKKEAAEEKE------EEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQ 533

Query: 61  HAYEKED----SDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE---------HQK 107
              E+ED    SD+   EE    KEG   ++  +   G   AE E EE          +K
Sbjct: 534 EEEEEEDEGAKSDQA--EEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEK 591

Query: 108 CQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRS-IEKSNSVKKSQPDLPISKID 166
            ++  T   LV +  +E+     SP  K     E   +S + KS   +K +  +P S ++
Sbjct: 592 SEEVATKEELVADAKVEKPEKAKSPVPK--SPVEEKGKSPVPKSPVEEKGKSPVPKSPVE 649

Query: 167 QWLEQYT--QAIETAGRTP----KLARQASIELPSMAVASTKSRWETG-----EVQAQSA 215
           +  +       +E  G++P     +  +A   +P   V   KS+ E G     E + +  
Sbjct: 650 EKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEV 709

Query: 216 AKTPSCKDIVAGDMSKKSLWEQKGGSKTSSTIK 248
            + P  + +   +   K + E+K   K  S +K
Sbjct: 710 KEAPKEEKVEKKEEKPKDVPEKK---KAESPVK 739


>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
           [Homo sapiens]
          Length = 540

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 38/273 (13%)

Query: 1   MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
           + +S+K  +    +E E      + PE  ++   A+ +      P+ +  EGE+E+  G 
Sbjct: 104 LAVSMKEEKKEAAEEKE------EEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQ 157

Query: 61  HAYEKED----SDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE---------HQK 107
              E+ED    SD+   EE    KEG   ++  +   G   AE E EE          +K
Sbjct: 158 EEEEEEDEGAKSDQA--EEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEK 215

Query: 108 CQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRS-IEKSNSVKKSQPDLPISKID 166
            ++  T   LV +  +E+     SP  K     E   +S + KS   +K +  +P S ++
Sbjct: 216 SEEVATKEELVADAKVEKPEKAKSPVPK--SPVEEKGKSPVPKSPVEEKGKSPVPKSPVE 273

Query: 167 QWLEQYT--QAIETAGRTP----KLARQASIELPSMAVASTKSRWETG-----EVQAQSA 215
           +  +       +E  G++P     +  +A   +P   V   KS+ E G     E + +  
Sbjct: 274 EKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEV 333

Query: 216 AKTPSCKDIVAGDMSKKSLWEQKGGSKTSSTIK 248
            + P  + +   +   K + E+K   K  S +K
Sbjct: 334 KEAPKEEKVEKKEEKPKDVPEKK---KAESPVK 363


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
            sapiens]
          Length = 1152

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 26/99 (26%), Positives = 44/99 (44%)

Query: 12   ELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEV 71
            E +E EG G+  +   + ++ EG +   + GE  +    EGE+E+   +    + +  E 
Sbjct: 973  EGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEG 1032

Query: 72   HLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQ 110
              EE    +EG   E   +        EEE+EE  K Q+
Sbjct: 1033 EGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQE 1071



 Score = 33.1 bits (74), Expect = 0.27
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 12   ELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEV 71
            E ++ EG G+  +   + ++ EG     + GE  +    EGE E+  G    E+E+ +E 
Sbjct: 940  EGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEG-EGEEGEGEGEEEEGEGEGEEEEGEEE 998

Query: 72   HLEELSLSKEGPGP---------EDTVQDNLGAAGAEEEQEEHQ 106
              EE    +EG G          E  V+   G    EEE+ E +
Sbjct: 999  GEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEE 1042



 Score = 31.2 bits (69), Expect = 1.0
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 12  ELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEV 71
           E +E+EG G+  +   + ++ EG +   +     +    EGE+E   G    E+E+ +  
Sbjct: 827 EEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGE 886

Query: 72  HLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE 104
             EE     EG G E+  +      G  E +EE
Sbjct: 887 GEEE----GEGEGEEEEGEGEGEEEGEGEGEEE 915



 Score = 31.2 bits (69), Expect = 1.0
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 12/99 (12%)

Query: 9   EAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDS 68
           E  E +E+EG G+  +  E + + EG +G    GE  +    EGE E+  G    E+E  
Sbjct: 838 EEGEGEEEEGEGE-EEEGEGKGEEEGEEG---EGEE-EGEEGEGEGEEEEGEGEGEEEGE 892

Query: 69  DEVHLEELSLSKEGPGPED---TVQDNLGAAGAEEEQEE 104
            E   EE     EG G E+     ++  G    EEE EE
Sbjct: 893 GEGEEEE----GEGEGEEEGEGEGEEEEGEGKGEEEGEE 927



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)

Query: 6   KPSEAP-ELDEDEGFGDWSQRP-EQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAY 63
           +P E   EL E E   +W +R  E+++Q E  QG     E  Q     GE+E   G    
Sbjct: 688 RPGEGEKELAEKE---EWKKRDGEEQEQKEREQG--HQKERNQEMEEGGEEEHGEG---- 738

Query: 64  EKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPR 112
           E+E+ D    EE    KEG G E+   + +     E E+EE ++ ++ R
Sbjct: 739 EEEEGDREEEEE----KEGEGKEEGEGEEV---EGEREKEEGERKKEER 780



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 12  ELDEDEGFGDWSQRPE-QRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDE 70
           E +E+EG G+  +  E + ++ EG     + GE  +    EGE+E+  G     + + +E
Sbjct: 894 EGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGE---GEGEEEEGEGEGEDGEGEGEE 950

Query: 71  VHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE 104
              E     +EG G  +   +  G  G  E +EE
Sbjct: 951 EEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEE 984



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 14/104 (13%)

Query: 14  DEDEGFGDW-----SQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQE--------DRPGL 60
           D  EG GD      S   E  Q  E  +G  D G     R  EGE+E         R G 
Sbjct: 649 DGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDG- 707

Query: 61  HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE 104
              E+++ ++ H +E +   E  G E+  +        EEE+E+
Sbjct: 708 EEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEK 751



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 2/99 (2%)

Query: 9   EAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDS 68
           E  E + D+G G+  +  E R + +   G ++ GE  + +  E E+E+  G    E+ + 
Sbjct: 785 EKGEEEGDQGEGE-EEETEGRGEEKEEGGEVEGGEVEEGKG-EREEEEEEGEGEEEEGEG 842

Query: 69  DEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQK 107
           +E   E      EG G E+  +      G E E E  ++
Sbjct: 843 EEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEE 881



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 12/108 (11%)

Query: 9   EAPELDEDEGFGDWSQRPEQRQ-QHEGAQGALDS------GEPPQCRSPEGEQEDRPGLH 61
           E  E +E+EG G   +  E+ + + EG +G  +       GE  +    EGE+E+  G  
Sbjct: 845 EEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEG 904

Query: 62  AYE-----KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE 104
             E     +E+  E   EE     EG G E+  +        E E+EE
Sbjct: 905 EEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952


>gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapiens]
          Length = 1758

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 33/106 (31%), Positives = 45/106 (42%), Gaps = 1/106 (0%)

Query: 75   ELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPL-VLEGTIEQSSPPLSPT 133
            ELS + +     D+   NL A+   EE   +   + P    PL   E T E+    LS T
Sbjct: 1603 ELSKNSDIEQSSDSKVKNLSASFPTEESSINYTFKTPEKEPPLWYAEFTKEELVQKLSST 1662

Query: 134  TKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETA 179
            TK  D    L R IE +N+V   Q  L  S+I +      Q +  A
Sbjct: 1663 TKSADHLNGLLREIEATNAVLMEQIKLLKSEIRRLERNQEQEVSAA 1708


>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
           exchanger), member 1 [Homo sapiens]
          Length = 1099

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 12  ELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSP-------EGEQEDRPGLHAYE 64
           E  E  G G+  ++     Q EG       G+  +C          + E ED   +HA +
Sbjct: 759 EEGETAGEGETEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAED 818

Query: 65  KE---DSDEVHLEELSLSKEGPGPEDT--VQDNLGAAGAEEEQEEHQKCQQ 110
            E   +  E   +ELS    G    D   V+D  G+ G + E+EE ++ +Q
Sbjct: 819 GEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQ 869


>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           9 [Homo sapiens]
          Length = 771

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
           K S A     + G G  S+  E+ ++ E  +G+  S E  +    E E+E+  G ++ E 
Sbjct: 264 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 320

Query: 65  -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
            ++ ++EV  EE+S  +E         V ++     + E +E  ++  +    S  + EG
Sbjct: 321 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 380

Query: 122 TIEQSSPPLSP 132
                SP LSP
Sbjct: 381 DYVPDSPALSP 391



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
           KP +  +++E +   D     +  ++   A+ +  +SG   +    E E+E+  G  + E
Sbjct: 239 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 298

Query: 65  --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
             +E+ +E   EE + S      E + ++      +E+E+ E++
Sbjct: 299 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 342


>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           8 [Homo sapiens]
          Length = 780

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
           K S A     + G G  S+  E+ ++ E  +G+  S E  +    E E+E+  G ++ E 
Sbjct: 273 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 329

Query: 65  -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
            ++ ++EV  EE+S  +E         V ++     + E +E  ++  +    S  + EG
Sbjct: 330 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 389

Query: 122 TIEQSSPPLSP 132
                SP LSP
Sbjct: 390 DYVPDSPALSP 400



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
           KP +  +++E +   D     +  ++   A+ +  +SG   +    E E+E+  G  + E
Sbjct: 248 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 307

Query: 65  --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
             +E+ +E   EE + S      E + ++      +E+E+ E++
Sbjct: 308 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 351


>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           5 [Homo sapiens]
          Length = 748

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
           K S A     + G G  S+  E+ ++ E  +G+  S E  +    E E+E+  G ++ E 
Sbjct: 241 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 297

Query: 65  -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
            ++ ++EV  EE+S  +E         V ++     + E +E  ++  +    S  + EG
Sbjct: 298 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 357

Query: 122 TIEQSSPPLSP 132
                SP LSP
Sbjct: 358 DYVPDSPALSP 368



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
           KP +  +++E +   D     +  ++   A+ +  +SG   +    E E+E+  G  + E
Sbjct: 216 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 275

Query: 65  --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
             +E+ +E   EE + S      E + ++      +E+E+ E++
Sbjct: 276 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 319


>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           4 [Homo sapiens]
          Length = 737

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
           K S A     + G G  S+  E+ ++ E  +G+  S E  +    E E+E+  G ++ E 
Sbjct: 230 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 286

Query: 65  -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
            ++ ++EV  EE+S  +E         V ++     + E +E  ++  +    S  + EG
Sbjct: 287 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 346

Query: 122 TIEQSSPPLSP 132
                SP LSP
Sbjct: 347 DYVPDSPALSP 357



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
           KP +  +++E +   D     +  ++   A+ +  +SG   +    E E+E+  G  + E
Sbjct: 205 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 264

Query: 65  --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
             +E+ +E   EE + S      E + ++      +E+E+ E++
Sbjct: 265 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 308


>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           3 [Homo sapiens]
          Length = 526

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
           K S A     + G G  S+  E+ ++ E  +G+  S E  +    E E+E+  G ++ E 
Sbjct: 19  KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 75

Query: 65  -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
            ++ ++EV  EE+S  +E         V ++     + E +E  ++  +    S  + EG
Sbjct: 76  SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 135

Query: 122 TIEQSSPPLSP 132
                SP LSP
Sbjct: 136 DYVPDSPALSP 146



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 36/196 (18%), Positives = 74/196 (37%), Gaps = 5/196 (2%)

Query: 28  QRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEGPGPED 87
           +R+       + +SG   +    E E+E+  G  + E E+ +E   EE    + G   E+
Sbjct: 17  ERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE--EEEEEEETGSNSEE 74

Query: 88  TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSI 147
             + +      EE  E+ ++  +      +V E   ++ S       + +      + ++
Sbjct: 75  ASEQSAEEVSEEEMSEDEER--ENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSAL 132

Query: 148 EKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTPKLARQASIELPSMAVASTKSRWET 207
            + + V  S P L   ++ Q L +Y  A++      +      IE  +  V       +T
Sbjct: 133 TEGDYVPDS-PALSPIELKQELPKYLPALQGCRSVEEFQCLNRIEEGTYGVVYRAKDKKT 191

Query: 208 GEVQAQSAAKTPSCKD 223
            E+ A    K    K+
Sbjct: 192 DEIVALKRLKMEKEKE 207


>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           2 [Homo sapiens]
          Length = 782

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
           K S A     + G G  S+  E+ ++ E  +G+  S E  +    E E+E+  G ++ E 
Sbjct: 275 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 331

Query: 65  -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
            ++ ++EV  EE+S  +E         V ++     + E +E  ++  +    S  + EG
Sbjct: 332 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 391

Query: 122 TIEQSSPPLSP 132
                SP LSP
Sbjct: 392 DYVPDSPALSP 402



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 6   KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
           KP +  +++E +   D     +  ++   A+ +  +SG   +    E E+E+  G  + E
Sbjct: 250 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 309

Query: 65  --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
             +E+ +E   EE + S      E + ++      +E+E+ E++
Sbjct: 310 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 353


>gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]
          Length = 1035

 Score = 36.6 bits (83), Expect = 0.025
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 33  EGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLS------KEGPGPE 86
           E  +G   S    +CR+PEG +ED+ GL  +  +D DE  +     S      K+GP   
Sbjct: 264 EEGRGGGGSSHLRRCRAPEGFEEDKDGLPEWCLDDEDE-EMGTFDASGAFLPLKKGPKEP 322

Query: 87  DTVQDNLGAAGAEEEQEEHQKCQQ 110
              +  L   G EEE+E  +  ++
Sbjct: 323 IPEEQELDFQGLEEEEEPSEGLEE 346


>gi|56549694 enabled homolog isoform a [Homo sapiens]
          Length = 591

 Score = 36.2 bits (82), Expect = 0.032
 Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 11/167 (6%)

Query: 64  EKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTI 123
           E+E  +   +E   L +E    E   ++ L     E E++E ++ ++      L  +  +
Sbjct: 157 ERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERLERQERLERQERL 216

Query: 124 EQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTP 183
           E+         + +DR     +  E+   +++ + +    +  + LE+     E   R  
Sbjct: 217 ERQ--------ERLDRERQERQERERLERLERERQE---RERQEQLEREQLEWERERRIS 265

Query: 184 KLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMS 230
             A  AS+E P  +V    S  E G   A   A+TPS + IV G ++
Sbjct: 266 SAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLA 312


>gi|39930375 enabled homolog isoform b [Homo sapiens]
          Length = 570

 Score = 36.2 bits (82), Expect = 0.032
 Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 11/167 (6%)

Query: 64  EKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTI 123
           E+E  +   +E   L +E    E   ++ L     E E++E ++ ++      L  +  +
Sbjct: 157 ERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERLERQERLERQERL 216

Query: 124 EQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTP 183
           E+         + +DR     +  E+   +++ + +    +  + LE+     E   R  
Sbjct: 217 ERQ--------ERLDRERQERQERERLERLERERQE---RERQEQLEREQLEWERERRIS 265

Query: 184 KLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMS 230
             A  AS+E P  +V    S  E G   A   A+TPS + IV G ++
Sbjct: 266 SAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLA 312


>gi|24431975 hypothetical protein LOC26148 [Homo sapiens]
          Length = 1247

 Score = 35.8 bits (81), Expect = 0.042
 Identities = 55/226 (24%), Positives = 83/226 (36%), Gaps = 35/226 (15%)

Query: 60   LHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVL 119
            L A  +E+ D+V  E+ S    GP  ED++++       +E++  H     P TP+   +
Sbjct: 947  LWAKFRENPDQVEPEDGSDVSPGPNSEDSIEE------VKEDRNSHPPANLP-TPASTRI 999

Query: 120  EGTIEQSSPPLSPTTKLI--DRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAI- 176
                      L    +LI  ++ E  +    +S   +KS    P+      L+       
Sbjct: 1000 LRKYSNIRGKLRAQQRLIKNEKMECPDALAVESKPSRKSVCINPLMSPKLALQVDADGFP 1059

Query: 177  ----ETAGRTPKLARQASIELPSMAVASTKSRWE----------------TGEVQAQSAA 216
                 T G   +  +Q S  LP   V S + R E                + E  A  A 
Sbjct: 1060 VKPKSTEGMKGRKGKQVSEILPKAEVQSKRKRTEGSSPPDSKNKGPTVKASKEKHADGAT 1119

Query: 217  KTPSCKDIVAGDMS-----KKSLWEQKGGSKTSSTIKSTPSGKRYK 257
            KTP+ K   A D S     K SL E K      S  KS P  ++ K
Sbjct: 1120 KTPAAKRPAARDRSSQPPKKTSLKENKVKIPKKSAGKSCPPSRKEK 1165


>gi|21735415 centromere protein B [Homo sapiens]
          Length = 599

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 20/101 (19%)

Query: 9   EAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDS 68
           E  E +E+EG G+  +   + ++ EG +G  + GE       E E E+   +      DS
Sbjct: 411 EEEEEEEEEGEGEEEEEEGEEEEEEGGEGE-ELGE-------EEEVEEEGDV------DS 456

Query: 69  DEVHLEELSLSKEGPGPEDTVQ------DNLGAAGAEEEQE 103
           DE   E+   S EG   ED  Q       + GA GA+EE +
Sbjct: 457 DEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQ 497



 Score = 28.9 bits (63), Expect = 5.2
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 4   SLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAY 63
           +++PS+      + GFG               +   +  E  +    EGE+E+  G    
Sbjct: 374 AVEPSDIAACFREAGFGGGPNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEG---- 429

Query: 64  EKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTI 123
           E+E+ +    EEL       G E+ V++  G   ++EE+EE ++       +    +G +
Sbjct: 430 EEEEEEGGEGEEL-------GEEEEVEEE-GDVDSDEEEEEDEESSSEGLEAEDWAQGVV 481

Query: 124 E 124
           E
Sbjct: 482 E 482


>gi|47578107 delangin isoform B [Homo sapiens]
          Length = 2697

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 54/256 (21%), Positives = 92/256 (35%), Gaps = 13/256 (5%)

Query: 1   MLLSLKPSEAPELDEDEGF---GDWSQRPEQ-RQQHEGAQGALDSGEPPQCRSPEGEQED 56
           +++S+   +A  +D         D  ++PE+ +Q ++     L        +S      +
Sbjct: 539 LMVSIDLHQAGRVDSQASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPE 598

Query: 57  RPGLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAE---EEQEEHQKCQQPRT 113
            P   +  +    E+   E  L++  P     V+        E   E Q E  K  + RT
Sbjct: 599 TPKKKSDPELSKSEMKQSESRLAESKPNENRLVETKSSENKLETKVETQTEELKQNESRT 658

Query: 114 PSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYT 173
                 E TI +   P     +L D   + N+     +   KS+P+ P  K +   E   
Sbjct: 659 TECKQNESTIVE---PKQNENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPK 715

Query: 174 QAIETAGRTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKS 233
           Q  +    TPK       E P       +SR ET + + +   +TP  +     D  K S
Sbjct: 716 QKSDGHPETPKQKGDGRPETPKQ---KGESRPETPKQKNEGRPETPKHRHDNRRDSGKPS 772

Query: 234 LWEQKGGSKTSSTIKS 249
             ++   SK     KS
Sbjct: 773 TEKKPEVSKHKQDTKS 788


>gi|47578105 delangin isoform A [Homo sapiens]
          Length = 2804

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 54/256 (21%), Positives = 92/256 (35%), Gaps = 13/256 (5%)

Query: 1   MLLSLKPSEAPELDEDEGF---GDWSQRPEQ-RQQHEGAQGALDSGEPPQCRSPEGEQED 56
           +++S+   +A  +D         D  ++PE+ +Q ++     L        +S      +
Sbjct: 539 LMVSIDLHQAGRVDSQASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPE 598

Query: 57  RPGLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAE---EEQEEHQKCQQPRT 113
            P   +  +    E+   E  L++  P     V+        E   E Q E  K  + RT
Sbjct: 599 TPKKKSDPELSKSEMKQSESRLAESKPNENRLVETKSSENKLETKVETQTEELKQNESRT 658

Query: 114 PSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYT 173
                 E TI +   P     +L D   + N+     +   KS+P+ P  K +   E   
Sbjct: 659 TECKQNESTIVE---PKQNENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPK 715

Query: 174 QAIETAGRTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKS 233
           Q  +    TPK       E P       +SR ET + + +   +TP  +     D  K S
Sbjct: 716 QKSDGHPETPKQKGDGRPETPKQ---KGESRPETPKQKNEGRPETPKHRHDNRRDSGKPS 772

Query: 234 LWEQKGGSKTSSTIKS 249
             ++   SK     KS
Sbjct: 773 TEKKPEVSKHKQDTKS 788


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.304    0.124    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,110,813
Number of Sequences: 37866
Number of extensions: 705453
Number of successful extensions: 2897
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 2514
Number of HSP's gapped (non-prelim): 591
length of query: 277
length of database: 18,247,518
effective HSP length: 101
effective length of query: 176
effective length of database: 14,423,052
effective search space: 2538457152
effective search space used: 2538457152
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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