CCDC130 3475

Name: CCDC130	Sequence: fasta or formatted (396aa)		NCBI GI: 13540614
Description: coiled-coil domain containing 130		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 30 2 C cysteine 2.0 8 1 D aspartate 6.3 25 2 E glutamate 8.6 34 4 F phenylalanine 2.0 8 1 G glycine 5.1 20 1 H histidine 2.8 11 1 I isoleucine 3.8 15 2 K lysine 7.8 31 3 L leucine 7.1 28 2 M methionine 2.3 9 1 N asparagine 3.0 12 1 P proline 7.1 28 2 Q glutamine 4.3 17 1 R arginine 8.1 32 3 S serine 9.1 36 3 T threonine 5.3 21 2 V valine 3.8 15 1 W tryptophan 1.0 4 1 Y tyrosine 3.0 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 130 CCDC94 0.089 coiled-coil domain containing 94 TCHH 0.020 trichohyalin DBN1 0.019 drebrin 1 isoform b DBN1 0.019 drebrin 1 isoform a EIF5B 0.018 eukaryotic translation initiation factor 5B ZC3H4 0.018 zinc finger CCCH-type containing 4 SRRM2 0.017 splicing coactivator subunit SRm300 CPEB3 0.017 cytoplasmic polyadenylation element binding protein ... CACNA1B 0.017 calcium channel, voltage-dependent, N type, alpha 1B ... PPP1R12C 0.015 protein phosphatase 1, regulatory subunit 12C ZC3H18 0.015 zinc finger CCCH-type containing 18 RBM25 0.015 RNA binding motif protein 25 EPB41L3 0.015 erythrocyte membrane protein band 4.1-like 3 SHANK2 0.015 SH3 and multiple ankyrin repeat domains 2 isoform 1... PRG4 0.014 proteoglycan 4 isoform D PRG4 0.014 proteoglycan 4 isoform C PRG4 0.014 proteoglycan 4 isoform B PRG4 0.014 proteoglycan 4 isoform A SETD1A 0.014 SET domain containing 1A PIK3AP1 0.014 phosphoinositide-3-kinase adaptor protein 1 KIAA1009 0.014 KIAA1009 protein LOC100291624 0.013 PREDICTED: hypothetical protein XP_002345876 LOC100289712 0.013 PREDICTED: hypothetical protein XP_002346761 LOC100287455 0.013 PREDICTED: hypothetical protein XP_002342583 FMNL2 0.013 formin-like 2 TXNDC2 0.013 thioredoxin domain-containing 2 isoform 1 TXNDC2 0.013 thioredoxin domain-containing 2 isoform 2 TXNDC2 0.013 thioredoxin domain-containing 2 isoform 1 TROAP 0.013 tastin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.