Guide to the Human Genome
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Name: EPB41L3 Sequence: fasta or formatted (1087aa) NCBI GI: 32490572
Description:

erythrocyte membrane protein band 4.1-like 3

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         80           5
 C cysteine            1.4         15           1
 D aspartate           5.6         61           3
 E glutamate          10.9        118           3
 F phenylalanine       3.6         39           3
 G glycine             5.6         61           2
 H histidine           2.5         27           2
 I isoleucine          3.8         41           1
 K lysine              6.8         74           2
 L leucine             8.6         94           3
 M methionine          1.2         13           1
 N asparagine          1.6         17           2
 P proline             6.0         65           2
 Q glutamine           4.5         49           3
 R arginine            5.0         54           3
 S serine              9.7        105           4
 T threonine           8.0         87           5
 V valine              5.0         54           3
 W tryptophan          0.6          6           1
 Y tyrosine            2.5         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erythrocyte membrane protein band 4.1-like 3 
EPB41L1               0.285   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.279   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L2               0.261   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.261   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.261   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41                 0.234   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41                 0.234   erythrocyte membrane protein band 4.1 (elliptocytosis...
EPB41                 0.216   erythrocyte membrane protein band 4.1 (elliptocytosi...
PTPN4                 0.132   protein tyrosine phosphatase, non-receptor type 4 [Ho...
EPB41L5               0.118   erythrocyte membrane protein band 4.1 like 5 
EPB41L4B              0.114   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.114   erythrocyte membrane protein band 4.1 like 4B isofo...
FARP1                 0.114   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
EPB41L4A              0.111   erythrocyte protein band 4.1-like 4 
FRMD3                 0.110   FERM domain containing 3 
FARP2                 0.109   FERM, RhoGEF and pleckstrin domain protein 2 
FRMD5                 0.104   FERM domain containing 5 isoform 2 
FRMD7                 0.102   FERM domain containing 7 
PTPN3                 0.093   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.093   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN21                0.065   protein tyrosine phosphatase, non-receptor type 21 ...
PTPN3                 0.060   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.059   protein tyrosine phosphatase, non-receptor type 3 i...
EZR                   0.057   ezrin 
EZR                   0.057   ezrin 
MSN                   0.053   moesin 
RDX                   0.052   radixin 
NF2                   0.051   neurofibromin 2 isoform 2 
NF2                   0.051   neurofibromin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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