Guide to the Human Genome
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Name: KIAA1009 Sequence: fasta or formatted (1403aa) NCBI GI: 148612801
Description:

KIAA1009 protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         77           2
 C cysteine            0.6          9           1
 D aspartate           5.8         81           2
 E glutamate          13.5        190           3
 F phenylalanine       2.7         38           2
 G glycine             2.7         38           1
 H histidine           2.1         30           1
 I isoleucine          4.3         60           2
 K lysine             11.5        162           3
 L leucine            10.1        142           2
 M methionine          2.4         34           2
 N asparagine          5.1         71           1
 P proline             2.6         36           2
 Q glutamine           7.1         99           2
 R arginine            4.3         60           2
 S serine              8.4        118           3
 T threonine           4.5         63           2
 V valine              4.7         66           3
 W tryptophan          0.4          6           2
 Y tyrosine            1.6         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIAA1009 protein 
GOLGB1                0.040   golgi autoantigen, golgin subfamily b, macrogolgin ...
CENPE                 0.038   centromere protein E 
CCDC88A               0.037   coiled-coil domain containing 88A isoform 1 
CENPF                 0.037   centromere protein F 
ANKRD26               0.035   ankyrin repeat domain 26 
EEA1                  0.035   early endosome antigen 1, 162kD 
GOLGA4                0.035   golgi autoantigen, golgin subfamily a, 4 
PLEC1                 0.035   plectin 1 isoform 11 
PLEC1                 0.035   plectin 1 isoform 10 
PLEC1                 0.035   plectin 1 isoform 8 
PLEC1                 0.035   plectin 1 isoform 7 
PLEC1                 0.035   plectin 1 isoform 6 
PLEC1                 0.035   plectin 1 isoform 3 
PLEC1                 0.035   plectin 1 isoform 2 
PLEC1                 0.035   plectin 1 isoform 1 
MYH10                 0.034   myosin, heavy polypeptide 10, non-muscle 
MYH11                 0.034   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.034   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.034   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.034   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH2                  0.033   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.033   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH9                  0.033   myosin, heavy polypeptide 9, non-muscle 
TPR                   0.032   nuclear pore complex-associated protein TPR 
CCDC88A               0.032   coiled-coil domain containing 88A isoform 2 
FAM184A               0.032   hypothetical protein LOC79632 isoform 1 
GCC2                  0.031   GRIP and coiled-coil domain-containing 2 
MYH8                  0.031   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH1                  0.031   myosin, heavy chain 1, skeletal muscle, adult [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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