Search of human proteins with 13540521

Search of human proteins with 13540521

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13540521 basic helix-loop-helix domain containing, class B,
3 [Homo sapiens]
         (482 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13540521 basic helix-loop-helix domain containing, class B, 3...   971   0.0  
gi|4503299 basic helix-loop-helix family, member e40 [Homo sapiens]   236   3e-62
gi|6912414 hairy/enhancer-of-split related with YRPW motif 2 [Ho...    70   4e-12
gi|105990528 hairy/enhancer-of-split related with YRPW motif 1 i...    69   1e-11
gi|7657154 hairy/enhancer-of-split related with YRPW motif-like ...    67   4e-11
gi|105990526 hairy/enhancer-of-split related with YRPW motif 1 i...    65   1e-10
gi|5031763 hairy and enhancer of split 1 [Homo sapiens]                64   4e-10
gi|216548627 hairy and enhancer of split 4 isoform 1 [Homo sapiens]    63   7e-10
gi|10863967 hairy and enhancer of split 4 isoform 2 [Homo sapiens]     63   7e-10
gi|24497554 homeobox A13 [Homo sapiens]                                62   9e-10
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     58   2e-08
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     58   2e-08
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     57   3e-08
gi|40288197 GATA binding protein 6 [Homo sapiens]                      56   8e-08
gi|19111150 angiomotin isoform 2 [Homo sapiens]                        55   1e-07
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       55   1e-07
gi|73476377 LBXCOR1 homolog [Homo sapiens]                             53   5e-07
gi|4758392 forkhead box D1 [Homo sapiens]                              53   7e-07
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]          52   9e-07
gi|122937321 UNC homeobox [Homo sapiens]                               52   2e-06
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]         51   2e-06
gi|112421108 capicua homolog [Homo sapiens]                            51   2e-06
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    50   3e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    50   3e-06
gi|24432032 zinc finger protein 503 [Homo sapiens]                     50   5e-06
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    49   8e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    49   8e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    49   8e-06
gi|71274172 ankyrin repeat domain 56 [Homo sapiens]                    49   8e-06
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap...    49   1e-05

>gi|13540521 basic helix-loop-helix domain containing, class B, 3
           [Homo sapiens]
          Length = 482

 Score =  971 bits (2509), Expect = 0.0
 Identities = 482/482 (100%), Positives = 482/482 (100%)

Query: 1   MDEGIPHLQERQLLEHRDFIGLDYSSLYMCKPKRSMKRDDTKDTYKLPHRLIEKKRRDRI 60
           MDEGIPHLQERQLLEHRDFIGLDYSSLYMCKPKRSMKRDDTKDTYKLPHRLIEKKRRDRI
Sbjct: 1   MDEGIPHLQERQLLEHRDFIGLDYSSLYMCKPKRSMKRDDTKDTYKLPHRLIEKKRRDRI 60

Query: 61  NECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSL 120
           NECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSL
Sbjct: 61  NECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSL 120

Query: 121 KSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHAVATQFLPTPQLL 180
           KSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHAVATQFLPTPQLL
Sbjct: 121 KSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHAVATQFLPTPQLL 180

Query: 181 TQQVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLAYCVPVIQRTQPSAELAAENDTDTDS 240
           TQQVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLAYCVPVIQRTQPSAELAAENDTDTDS
Sbjct: 181 TQQVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLAYCVPVIQRTQPSAELAAENDTDTDS 240

Query: 241 GYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAA 300
           GYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAA
Sbjct: 241 GYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAA 300

Query: 301 AAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAA 360
           AAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAA
Sbjct: 301 AAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAA 360

Query: 361 AYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLS 420
           AYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLS
Sbjct: 361 AYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLS 420

Query: 421 PPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGKE 480
           PPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGKE
Sbjct: 421 PPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGKE 480

Query: 481 AP 482
           AP
Sbjct: 481 AP 482


>gi|4503299 basic helix-loop-helix family, member e40 [Homo sapiens]
          Length = 412

 Score =  236 bits (603), Expect = 3e-62
 Identities = 184/442 (41%), Positives = 236/442 (53%), Gaps = 78/442 (17%)

Query: 14  LEHRDFIGLDYSSLYMC-KPKRSMKR-DDTKDTYKLPHRLIEKKRRDRINECIAQLKDLL 71
           LEH D  G+  + +Y   K +R +KR +D+K+TYKLPHRLIEKKRRDRINECIAQLKDLL
Sbjct: 20  LEHGDLPGMYPAHMYQVYKSRRGIKRSEDSKETYKLPHRLIEKKRRDRINECIAQLKDLL 79

Query: 72  PEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSLK---SPIQSDL 128
           PEHLKLTTLGHLEKAVVLELTLKH+KALT L +QQ QKIIALQ+G ++ +     +++  
Sbjct: 80  PEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIALQSGLQAGELSGRNVETGQ 139

Query: 129 DAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHAVATQFLPTPQLLTQQVPLSK 188
           + F SGFQTCA+EVLQYL++ E+   R+ +  QL+ HLH V ++ L   Q  T + P   
Sbjct: 140 EMFCSGFQTCAREVLQYLAKHEN--TRDLKSSQLVTHLHRVVSELL---QGGTSRKP--- 191

Query: 189 GTGAPSAAGSAAAPCLERAGQKLEPLAYCVPVIQRT-QPSAELAAENDTDTDSGYGGEAE 247
              AP        P     G +  P   CVPVIQRT   S+   + +DTDTDSGYGGE+ 
Sbjct: 192 SDPAPKVMDFKEKPSSPAKGSE-GPGKNCVPVIQRTFAHSSGEQSGSDTDTDSGYGGES- 249

Query: 248 ARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGP 307
                EKG         ++ E P   S   +R  +  R G          A    +   P
Sbjct: 250 -----EKG--------DLRSEQPCFKSDHGRRFTMGERIG----------AIKQESEEPP 286

Query: 308 DPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFL 367
                  L   +    SS +       +PF  P     PFCLPF +L P +A AY+    
Sbjct: 287 TKKNRMQLSDDEGHFTSSDLI-----SSPFLGPHPHQPPFCLPF-YLIPPSATAYLPM-- 338

Query: 368 DKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAG 427
               LEK  YP +     P+LYPG+ A AAA                LSS ++P      
Sbjct: 339 ----LEKCWYPTSV----PVLYPGLNASAAA----------------LSSFMNPDK---- 370

Query: 428 AAAATLLPHEVAPLGAPHPQHP 449
            +A  L+P     L +P P HP
Sbjct: 371 ISAPLLMPQR---LPSPLPAHP 389


>gi|6912414 hairy/enhancer-of-split related with YRPW motif 2 [Homo
           sapiens]
          Length = 337

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 13/122 (10%)

Query: 51  LIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKI 110
           +IEK+RRDRIN  +++L+ L+P   +      LEKA +L++T+ HLK L A   + +   
Sbjct: 55  IIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDA 114

Query: 111 IALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHAVA 170
            AL              +D    GF+ C  EV +YLS  E     +P  V+L++HL   A
Sbjct: 115 HALA-------------MDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCA 161

Query: 171 TQ 172
           TQ
Sbjct: 162 TQ 163



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 386 PLLYPGIPAPAAAAAAAAAAAAAAAAFPCL---SSVLSPPPEKAGAAAATLLPHEVAPLG 442
           PL    +   A   AAAAAA AAA +FP     +  + PP   A  AAAT +   ++   
Sbjct: 252 PLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAVAAATAISPPLSVSA 311

Query: 443 APHPQHPHGRTH 454
              PQ     T+
Sbjct: 312 TSSPQQTSSGTN 323



 Score = 30.4 bits (67), Expect = 3.7
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 340 PAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAA 399
           P+  +   C+P    S  + +A V      +    + +P + A  FP+L P         
Sbjct: 241 PSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPN-------- 292

Query: 400 AAAAAAAAAAAAFPCLSSVLSPPPE 424
           AAAA AAA A + P   S  S P +
Sbjct: 293 AAAAVAAATAISPPLSVSATSSPQQ 317


>gi|105990528 hairy/enhancer-of-split related with YRPW motif 1
           isoform a [Homo sapiens]
          Length = 304

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 13/122 (10%)

Query: 51  LIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKI 110
           +IEK+RRDRIN  +++L+ L+P   +      LEKA +L++T+ HLK L     + +   
Sbjct: 56  IIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTAGGKGYFDA 115

Query: 111 IALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHAVA 170
            AL    RSL             GF+ C  EV +YLS  E     +P  V+L++HL+  A
Sbjct: 116 HALAMDYRSL-------------GFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYA 162

Query: 171 TQ 172
           +Q
Sbjct: 163 SQ 164


>gi|7657154 hairy/enhancer-of-split related with YRPW motif-like
           [Homo sapiens]
          Length = 328

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 14/128 (10%)

Query: 51  LIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKI 110
           +IEK+RRDRIN  +++L+ L+P   +      LEKA VL++T+ HLK L A         
Sbjct: 50  IIEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLHATGGTGFFDA 109

Query: 111 IALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPR-EPRCVQLINHLHAV 169
            AL    RS+             GF+ C  EV++YL   E  + R +P  ++L++HL++ 
Sbjct: 110 RALAVDFRSI-------------GFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 170 ATQFLPTP 177
           A +  P+P
Sbjct: 157 AAEMEPSP 164



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 386 PLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLP 435
           PL  P  P P A ++ AA ++  A   P L S    PP   G+AA   +P
Sbjct: 250 PLERPATPVPVAPSSRAARSSHIA---PLLQSSSPTPPGPTGSAAYVAVP 296


>gi|105990526 hairy/enhancer-of-split related with YRPW motif 1
           isoform b [Homo sapiens]
          Length = 308

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 17/126 (13%)

Query: 51  LIEKKRRDRINECIAQLKDLLPEHLKLTTL----GHLEKAVVLELTLKHLKALTALTEQQ 106
           +IEK+RRDRIN  +++L+ L+P   +   +      LEKA +L++T+ HLK L     + 
Sbjct: 56  IIEKRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKMLHTAGGKG 115

Query: 107 HQKIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHL 166
           +    AL    RSL             GF+ C  EV +YLS  E     +P  V+L++HL
Sbjct: 116 YFDAHALAMDYRSL-------------GFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 162

Query: 167 HAVATQ 172
           +  A+Q
Sbjct: 163 NNYASQ 168


>gi|5031763 hairy and enhancer of split 1 [Homo sapiens]
          Length = 280

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 59/163 (36%), Positives = 78/163 (47%), Gaps = 25/163 (15%)

Query: 51  LIEKKRRDRINECIAQLKDLLPEHLKLTTLGH--LEKAVVLELTLKHLKALTALTEQQHQ 108
           ++EK+RR RINE ++QLK L+ + LK  +  H  LEKA +LE+T+KHL+ L     Q+ Q
Sbjct: 41  IMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNL-----QRAQ 95

Query: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHA 168
              AL        S   S L  + +GF  C  EV ++LS  E     E R  +L+ HL  
Sbjct: 96  MTAAL--------STDPSVLGKYRAGFSECMNEVTRFLSTCEG-VNTEVR-TRLLGHLAN 145

Query: 169 VATQF-------LPTPQLLTQQVPLSKGTGAPSAAGSAAAPCL 204
             TQ         P P L     P   G G P  A  A  P L
Sbjct: 146 CMTQINAMTYPGQPHPALQAPPPP-PPGPGGPQHAPFAPPPPL 187


>gi|216548627 hairy and enhancer of split 4 isoform 1 [Homo sapiens]
          Length = 247

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 24/186 (12%)

Query: 51  LIEKKRRDRINECIAQLKDLLPEHLKLTTLGH--LEKAVVLELTLKHLKALTALTEQQHQ 108
           ++EK+RR RINE +AQLK L+ + L+  +  H  LEKA +LE+T++HL++L      +  
Sbjct: 67  VMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSL------RRV 120

Query: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHA 168
           ++ A  + + ++       L  + +GF  C  EV ++L+  E   P + R  +L+ HL A
Sbjct: 121 QVTAALSADPAV-------LGKYRAGFHECLAEVNRFLAGCEG-VPADVRS-RLLGHLAA 171

Query: 169 VATQFLPT--PQLLTQQVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLA-YCVPVIQRTQ 225
              Q  P+  P  L+   P      AP+    A  P L   G     LA   +P + R  
Sbjct: 172 CLRQLGPSRRPASLSPAAPAE----APAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRAL 227

Query: 226 PSAELA 231
           P+A  A
Sbjct: 228 PAAPRA 233


>gi|10863967 hairy and enhancer of split 4 isoform 2 [Homo sapiens]
          Length = 221

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 24/186 (12%)

Query: 51  LIEKKRRDRINECIAQLKDLLPEHLKLTTLGH--LEKAVVLELTLKHLKALTALTEQQHQ 108
           ++EK+RR RINE +AQLK L+ + L+  +  H  LEKA +LE+T++HL++L      +  
Sbjct: 41  VMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSL------RRV 94

Query: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHA 168
           ++ A  + + ++       L  + +GF  C  EV ++L+  E   P + R  +L+ HL A
Sbjct: 95  QVTAALSADPAV-------LGKYRAGFHECLAEVNRFLAGCEG-VPADVRS-RLLGHLAA 145

Query: 169 VATQFLPT--PQLLTQQVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLA-YCVPVIQRTQ 225
              Q  P+  P  L+   P      AP+    A  P L   G     LA   +P + R  
Sbjct: 146 CLRQLGPSRRPASLSPAAPAE----APAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRAL 201

Query: 226 PSAELA 231
           P+A  A
Sbjct: 202 PAAPRA 207


>gi|24497554 homeobox A13 [Homo sapiens]
          Length = 388

 Score = 62.4 bits (150), Expect = 9e-10
 Identities = 65/161 (40%), Positives = 71/161 (44%), Gaps = 30/161 (18%)

Query: 277 PKRMKLDSRGGG------SGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFG 330
           P  M L   GGG      +    G  AAAAAAA      AAAAA                
Sbjct: 14  PTVMFLYDNGGGLVADELNKNMEGAAAAAAAAA------AAAAA---------------- 51

Query: 331 GGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYP 390
           G GG  FP PAAAAA         + +AAAA      +       L P AA+A      P
Sbjct: 52  GAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSA--P 109

Query: 391 GIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAA 431
           G   P+AAAAAAAAAAAAAAA    SS    P   AGA AA
Sbjct: 110 GEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAA 150



 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 293 PGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFC 352
           PG  +A ++A    P P+AAAA     AA  ++  A   GG  P     A AA  C P  
Sbjct: 99  PGAASAYSSAPGEAP-PSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCS 157

Query: 353 FLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAA 405
             + S++     P+          YP A   P P        PA+AAAAAA A
Sbjct: 158 AAAQSSSGPAALPY---GYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFA 207



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 56/183 (30%), Positives = 73/183 (39%), Gaps = 39/183 (21%)

Query: 295 GGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFL 354
           GG   A       + AAAAA     AA  ++  A  GGGG P P  AAA   F +     
Sbjct: 23  GGGLVADELNKNMEGAAAAA-----AAAAAAAAAGAGGGGFPHPAAAAAGGNFSV----- 72

Query: 355 SPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPC 414
           + +AAAA                 AAAAA         PAP A  AA+A ++A   A P 
Sbjct: 73  AAAAAAA-----------------AAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPS 115

Query: 415 LSSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDP 474
            ++  +     A AAAA       +  G P P  P G      A   +  +P S+A +  
Sbjct: 116 AAAAAAAAAAAAAAAAA------ASSSGGPGPAGPAG------AEAAKQCSPCSAAAQSS 163

Query: 475 SQP 477
           S P
Sbjct: 164 SGP 166


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 94/335 (28%), Positives = 118/335 (35%), Gaps = 43/335 (12%)

Query: 175 PTPQLLTQQVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLAYCVPVIQRTQPSAELAAEN 234
           P P L         G G  S+ G  A P    A   L P AY         PSA  AA  
Sbjct: 109 PRPALNNNLTEPPGGGGGGSSDGVGAPP--HSAAAALPPPAYGFGQPYGRSPSAVAAAAA 166

Query: 235 DTDTDSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDS------------------PA 276
                   G ++      + G G G       Q+   +                    PA
Sbjct: 167 AVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPA 226

Query: 277 PKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGG--- 333
           P       RGG     PG GAAAAA +   P  +A+A+      A      A GGGG   
Sbjct: 227 PAYALSSPRGGT----PGSGAAAAAGSKPPPSSSASASSSSSSFAQ-QRFGAMGGGGPSA 281

Query: 334 -GAPFPQPAAAAAPFCLPFCFLSPSAAAAYV-QPFLDKSGLEKYLYPAAAAAPFPLLYPG 391
            G   PQP A      L     SPS+A  Y   P  D SG  +       A   P     
Sbjct: 282 AGGGTPQPTATPT---LNQLLTSPSSARGYQGYPGGDYSGGPQ----DGGAGKGPADMAS 334

Query: 392 IPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAP---LGAPHPQH 448
               AAAAAAAAAAA+  A      + +SP     G       P   +P   +G   PQ 
Sbjct: 335 QCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQ- 393

Query: 449 PHGRTHLPFAGPREPGNPESSAQEDPSQP-GKEAP 482
           P+G T+ P++  + P +        P QP G + P
Sbjct: 394 PYGGTN-PYSQQQGPPSGPQQGHGYPGQPYGSQTP 427



 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 75/285 (26%), Positives = 100/285 (35%), Gaps = 61/285 (21%)

Query: 226 PSAELAAENDTDTDSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSR 285
           P +EL        +   GGEA A    E+G+   A+    + E P    P P   +L   
Sbjct: 20  PPSELKKAEQQQREEA-GGEAAAAAAAERGEMKAAAGQ--ESEGPAVGPPQPLGKELQDG 76

Query: 286 GGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGG--------GAPF 337
              +GGG GGGA +       PD   +     P  AL ++L    GGG        GAP 
Sbjct: 77  AESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSDGVGAP- 135

Query: 338 PQPAAAAAP-----FCLPFCFLSPSAAAAYVQPFLDK------------------SGLEK 374
           P  AAAA P     F  P+   SPSA AA       +                   GLE 
Sbjct: 136 PHSAAAALPPPAYGFGQPY-GRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEP 194

Query: 375 Y-------------------LYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCL 415
           Y                    YP  +A P P     + +P      + AAAAA +  P  
Sbjct: 195 YAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPS 254

Query: 416 SSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGP 460
           SS        A +++++        +G   P    G T  P A P
Sbjct: 255 SSA------SASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATP 293


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 94/335 (28%), Positives = 118/335 (35%), Gaps = 43/335 (12%)

Query: 175 PTPQLLTQQVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLAYCVPVIQRTQPSAELAAEN 234
           P P L         G G  S+ G  A P    A   L P AY         PSA  AA  
Sbjct: 109 PRPALNNNLTEPPGGGGGGSSDGVGAPP--HSAAAALPPPAYGFGQPYGRSPSAVAAAAA 166

Query: 235 DTDTDSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDS------------------PA 276
                   G ++      + G G G       Q+   +                    PA
Sbjct: 167 AVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPA 226

Query: 277 PKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGG--- 333
           P       RGG     PG GAAAAA +   P  +A+A+      A      A GGGG   
Sbjct: 227 PAYALSSPRGGT----PGSGAAAAAGSKPPPSSSASASSSSSSFAQ-QRFGAMGGGGPSA 281

Query: 334 -GAPFPQPAAAAAPFCLPFCFLSPSAAAAYV-QPFLDKSGLEKYLYPAAAAAPFPLLYPG 391
            G   PQP A      L     SPS+A  Y   P  D SG  +       A   P     
Sbjct: 282 AGGGTPQPTATPT---LNQLLTSPSSARGYQGYPGGDYSGGPQ----DGGAGKGPADMAS 334

Query: 392 IPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAP---LGAPHPQH 448
               AAAAAAAAAAA+  A      + +SP     G       P   +P   +G   PQ 
Sbjct: 335 QCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQ- 393

Query: 449 PHGRTHLPFAGPREPGNPESSAQEDPSQP-GKEAP 482
           P+G T+ P++  + P +        P QP G + P
Sbjct: 394 PYGGTN-PYSQQQGPPSGPQQGHGYPGQPYGSQTP 427



 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 75/285 (26%), Positives = 100/285 (35%), Gaps = 61/285 (21%)

Query: 226 PSAELAAENDTDTDSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSR 285
           P +EL        +   GGEA A    E+G+   A+    + E P    P P   +L   
Sbjct: 20  PPSELKKAEQQQREEA-GGEAAAAAAAERGEMKAAAGQ--ESEGPAVGPPQPLGKELQDG 76

Query: 286 GGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGG--------GAPF 337
              +GGG GGGA +       PD   +     P  AL ++L    GGG        GAP 
Sbjct: 77  AESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSDGVGAP- 135

Query: 338 PQPAAAAAP-----FCLPFCFLSPSAAAAYVQPFLDK------------------SGLEK 374
           P  AAAA P     F  P+   SPSA AA       +                   GLE 
Sbjct: 136 PHSAAAALPPPAYGFGQPY-GRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEP 194

Query: 375 Y-------------------LYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCL 415
           Y                    YP  +A P P     + +P      + AAAAA +  P  
Sbjct: 195 YAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPS 254

Query: 416 SSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGP 460
           SS        A +++++        +G   P    G T  P A P
Sbjct: 255 SSA------SASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATP 293


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 41/105 (39%), Positives = 47/105 (44%), Gaps = 5/105 (4%)

Query: 378 PAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHE 437
           PAAAAA  P   P  P P A  AAAA A A  AA    ++  SP P + G  A       
Sbjct: 119 PAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRA-----QR 173

Query: 438 VAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGKEAP 482
            APL AP P         P AGPR    P  +A+E P  P  + P
Sbjct: 174 AAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPP 218



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 62/202 (30%), Positives = 69/202 (34%), Gaps = 71/202 (35%)

Query: 256 KGAGASRVTIKQEPP--GEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAA 313
           KG+ + R   + +PP  G   PAP R             P G  AAAAAA   P PA   
Sbjct: 88  KGSISYRNAARVQPPRRGATPPAPPR------------APRGAPAAAAAAAPPPTPAPP- 134

Query: 314 ALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLE 373
                                 P P P AAAAP        +P AAAA            
Sbjct: 135 ----------------------PPPAPVAAAAPA------RAPRAAAA------------ 154

Query: 374 KYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPP------PEKAG 427
                AA A P P   P  P P A  AA  AA   A A P     ++PP      P  A 
Sbjct: 155 -----AATAPPSP--GPAQPGPRAQRAAPLAAPPPAPAAP---PAVAPPAGPRRAPPPAV 204

Query: 428 AAAATLLPHEVAPLGAPHPQHP 449
           AA    LP    P   P  Q P
Sbjct: 205 AAREPPLPPPPQPPAPPQQQQP 226


>gi|40288197 GATA binding protein 6 [Homo sapiens]
          Length = 595

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 75/241 (31%), Positives = 92/241 (38%), Gaps = 37/241 (15%)

Query: 255 GKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAA 314
           G  A  SR    +EP    SP        SRGG  G  PGG +      L   D  AAA 
Sbjct: 18  GADASDSRAFPAREPSTPPSPISSSSSSCSRGGERG--PGGASNCGTPQL---DTEAAAG 72

Query: 315 LLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPF--------CLPFCFLSPSAAA------ 360
              P  +LL S  A    G    P     A P          L F  L  +A A      
Sbjct: 73  --PPARSLLLSSYASHPFGAPHGPSAPGVAGPGGNLSSWEDLLLFTDLDQAATASKLLWS 130

Query: 361 ---AYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSS 417
              A + PF  +   E Y   AA ++  P  Y G P     +AAAAAAAAAAA     SS
Sbjct: 131 SRGAKLSPFAPEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAA-----SS 185

Query: 418 VLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQP 477
            +  P  + G+     LP+ +   G+    H  G      AG   PG P++SA   P   
Sbjct: 186 PVYVPTTRVGSMLPG-LPYHLQGSGSGPANHAGG------AG-AHPGWPQASADSPPYGS 237

Query: 478 G 478
           G
Sbjct: 238 G 238



 Score = 29.3 bits (64), Expect = 8.3
 Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 250 PDREKGKGAG-ASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPG--GGAAAAAAALLG 306
           P   +G G+G A+        PG    +       S GG +GGG    GGA +AAA +  
Sbjct: 202 PYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSA 261

Query: 307 PDPAAAAALLRPDAALLSSLVAFGGGGGA 335
             P + +  +   AA      A  G GGA
Sbjct: 262 RFPYSPSPPMANGAAREPGGYAAAGSGGA 290


>gi|19111150 angiomotin isoform 2 [Homo sapiens]
          Length = 675

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 71/240 (29%), Positives = 87/240 (36%), Gaps = 56/240 (23%)

Query: 270 PGEDSPAPKRMKLDSRGGGSGG---------GPGGGAAAAAAALLGPDPAAAAA----LL 316
           P   SP P    L S    +G          G      AA A +  P P AAAA    + 
Sbjct: 429 PSTPSPVPPSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPAPVAAAATAAAIT 488

Query: 317 RPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYL 376
              A + +++VA      A    PAAAAAP        SP+ AAA               
Sbjct: 489 ATAATITTTMVAAAPVAVAAAAAPAAAAAP--------SPATAAA--------------- 525

Query: 377 YPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAA--------------FPCLSSVLSPP 422
               AAA  P     IPA A+ A+AAA A +AAAA               P L  V +P 
Sbjct: 526 ---TAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPA 582

Query: 423 PEKAGAAAATLLPHE---VAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGK 479
             +A A A T  P     VAP  AP P     +  +P +    PG    S       P K
Sbjct: 583 AAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATGPGPHRLSIPSLTCNPDK 642


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 71/240 (29%), Positives = 87/240 (36%), Gaps = 56/240 (23%)

Query: 270  PGEDSPAPKRMKLDSRGGGSGG---------GPGGGAAAAAAALLGPDPAAAAA----LL 316
            P   SP P    L S    +G          G      AA A +  P P AAAA    + 
Sbjct: 838  PSTPSPVPPSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPAPVAAAATAAAIT 897

Query: 317  RPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYL 376
               A + +++VA      A    PAAAAAP        SP+ AAA               
Sbjct: 898  ATAATITTTMVAAAPVAVAAAAAPAAAAAP--------SPATAAA--------------- 934

Query: 377  YPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAA--------------FPCLSSVLSPP 422
                AAA  P     IPA A+ A+AAA A +AAAA               P L  V +P 
Sbjct: 935  ---TAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPA 991

Query: 423  PEKAGAAAATLLPHE---VAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGK 479
              +A A A T  P     VAP  AP P     +  +P +    PG    S       P K
Sbjct: 992  AAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATGPGPHRLSIPSLTCNPDK 1051


>gi|73476377 LBXCOR1 homolog [Homo sapiens]
          Length = 921

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 58/177 (32%), Positives = 72/177 (40%), Gaps = 37/177 (20%)

Query: 266 KQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSS 325
           K++ P   +  PK       GGG  G  GGGA    A+ L P   A              
Sbjct: 364 KKDDPVLGAGEPKGGPGTGSGGGGAG-TGGGAGGPGASHLPPGAGA-------------- 408

Query: 326 LVAFGGGGGAPF--PQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAA 383
               G GGGA F   QP+ AA         ++ +AAAA V P           +PAA + 
Sbjct: 409 ----GPGGGAMFWGHQPSGAAKDAAA----VAAAAAAATVYPTF------PMFWPAAGSL 454

Query: 384 PFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSP-----PPEKAGAAAATLLP 435
           P P  YP   + A A AAA AAAAAAAA    S    P     P +++G  A    P
Sbjct: 455 PVP-SYPAAQSQAKAVAAAVAAAAAAAAAAAGSGAPEPLDGAEPAKESGLGAEERCP 510



 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 63/187 (33%), Positives = 76/187 (40%), Gaps = 51/187 (27%)

Query: 287 GGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPF--PQPAAAA 344
           GG G G GGG A       GP     A+ L P A         G GGGA F   QP+ AA
Sbjct: 377 GGPGTGSGGGGAGTGGGAGGP----GASHLPPGAGA-------GPGGGAMFWGHQPSGAA 425

Query: 345 APFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPA-AAAAAAA 403
                    ++ +AAAA V P           +PAA + P P  YP   + A A AAA A
Sbjct: 426 KDAAA----VAAAAAAATVYPTFPM------FWPAAGSLPVPS-YPAAQSQAKAVAAAVA 474

Query: 404 AAAAAAAAFP------------------------CLSSVLSPPPEKAGAAAATLLPHEVA 439
           AAAAAAAA                          C S++   P ++ G   A  LP  +A
Sbjct: 475 AAAAAAAAAAGSGAPEPLDGAEPAKESGLGAEERCPSALSRGPLDEDGTDEA--LPPPLA 532

Query: 440 PLGAPHP 446
           PL  P P
Sbjct: 533 PLPPPPP 539


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 57/172 (33%), Positives = 67/172 (38%), Gaps = 25/172 (14%)

Query: 285 RGGGSGGGPGGGAAAAAAALLGPDPA--------------------AAAALLRPDAALLS 324
           RG G+ GG G  AAAAA     P P                     A  + L   AA  +
Sbjct: 240 RGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAA 299

Query: 325 SLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAP 384
           +  AF      P P P  AAA          P    A +   L  S  +     A+A A 
Sbjct: 300 AAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALAR 359

Query: 385 FPL----LYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPP-PEKAGAAAA 431
            P     +  G   PAAAAAAAA AAAAA A P  S V +PP P  +G   A
Sbjct: 360 SPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGCA 411



 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 46/132 (34%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 315 LLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEK 374
           LL P+AA   SL+  G G       PAAAAA F  P     P  A  Y            
Sbjct: 226 LLPPNAAAAESLLLRGAGAAGGAGDPAAAAALF--PPAPPPPPHAYGY------------ 271

Query: 375 YLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLL 434
                     + L  P    P+A  AAAAAAAAAAA  P       PP   A   A T  
Sbjct: 272 ----GPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAF 327

Query: 435 PHEVAPLGAPHP 446
            +   PLGA  P
Sbjct: 328 GYRPHPLGAALP 339



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 82/291 (28%), Positives = 100/291 (34%), Gaps = 76/291 (26%)

Query: 233 ENDTDTDSGYGG----EAEARPDREKGKGAGASRVTIKQE----------PPGEDSPAPK 278
           E + D D G GG       A+  R +   AG   +   +E          PP   SPAP 
Sbjct: 31  EEEEDDDEGGGGGPRLAVPAQRRRRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPP 90

Query: 279 ----RMKLDSRGGGSGGGPGGGAAAAAAA---LLGPDPA-----AAAALLRPDAALLSSL 326
                    + GGG GGG GGG +A + A   L+ P  +       A L  P   L  S 
Sbjct: 91  GPAPAAGAGAGGGGGGGGAGGGGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSE 150

Query: 327 VAFGGGGGAPFPQ---PA---AAAAPFCLPFCF-----------------LSPSAAAAYV 363
           +     G  P+ +   PA   +      L  CF                 L P +A  + 
Sbjct: 151 ICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFD 210

Query: 364 Q-PFL--DKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFP------- 413
              FL   K    + L P  AAA   LL  G    A AA  A   AAAAA FP       
Sbjct: 211 NGSFLRRRKRFKRQPLLPPNAAAAESLLLRG----AGAAGGAGDPAAAAALFPPAPPPPP 266

Query: 414 ---------CLSSVLSPP--PEKA--GAAAATLLPHEVAPLGAPHPQHPHG 451
                    C   +  PP  P  A   AAAA        P   P P  PHG
Sbjct: 267 HAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHG 317



 Score = 36.6 bits (83), Expect = 0.052
 Identities = 61/217 (28%), Positives = 76/217 (35%), Gaps = 33/217 (15%)

Query: 172 QFLPTPQLLTQQVPLSKGTGAPSAAGS-AAAPCLERAGQKLEPLAY------CVPVIQR- 223
           Q L  P     +  L +G GA   AG  AAA  L        P AY      C   +Q  
Sbjct: 224 QPLLPPNAAAAESLLLRGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLP 283

Query: 224 --TQPSAELAAENDTDTDSGYGGEAEARPDREKGKGAGASRVTI--KQEPPGEDSPAPKR 279
               PSA  AA       + +   +   P    G  A  +R     +  P G   P P  
Sbjct: 284 PYAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLP 343

Query: 280 MKLDSRGGGS---------------GGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLS 324
                 GG                 GG  G  AAAAAAA      AAAAA   P  + ++
Sbjct: 344 ASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAA-----QAAAAAQASPSPSPVA 398

Query: 325 SLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAA 361
           +  A G  GG    Q A   A   L    ++ +AAAA
Sbjct: 399 APPAPGSSGGGCAAQAAVGPAA-ALTRSLVAAAAAAA 434



 Score = 33.5 bits (75), Expect = 0.44
 Identities = 38/144 (26%), Positives = 51/144 (35%), Gaps = 18/144 (12%)

Query: 193 PSAAGSAAAPCLERAGQKLEPLAYCVP------VIQRTQPSAELAAENDTDTDSGYGGEA 246
           P   G+AA       G +  PL   +P        +   P A   A +    +S  GG  
Sbjct: 313 PPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARSPFSIESIIGGSL 372

Query: 247 EARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLG 306
                      A A+    +     + SP+P  +      G SGGG    AA   AA L 
Sbjct: 373 GP---------AAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALT 423

Query: 307 PDPAAAAALLRPDAALLSSLVAFG 330
               AAAA     A+ +SS  A G
Sbjct: 424 RSLVAAAAAA---ASSVSSSAALG 444


>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
          Length = 887

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 44/116 (37%), Positives = 49/116 (42%), Gaps = 20/116 (17%)

Query: 334 GAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIP 393
           G  FP P  A +P   PF     SAAAA              +  AAAAA          
Sbjct: 477 GNSFP-PQQAGSPLKRPF-----SAAAA--------------IAAAAAAAAAAAAAAAAA 516

Query: 394 APAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHP 449
           APA A AAAAA A AAAA P L++  +P P  A A A    P   A     H Q P
Sbjct: 517 APAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSHSQKP 572



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 60/238 (25%), Positives = 85/238 (35%), Gaps = 21/238 (8%)

Query: 240 SGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAA 299
           S   G+ E  P       + + +++     P + + +P +    +    +       AAA
Sbjct: 451 SSVSGKGEKHPPPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAA 510

Query: 300 AAAALLGPDPA-AAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSA 358
           AAAA   P PA AAAA     AA   +L A      AP   PA AAAP           A
Sbjct: 511 AAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAP-----------A 559

Query: 359 AAAYVQPFLDKSGLEKYLYP-AAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSS 417
           AAA   P    S  +K   P   A+ P P   P  P      A A      +     ++ 
Sbjct: 560 AAASAAP----SHSQKPSVPLIQASRPCPAAQP--PTKFIKIAPAIQLRTGSTGLKAIN- 612

Query: 418 VLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDPS 475
            +  P + A A  ++  P +    GAP P    G       GP     P +     P+
Sbjct: 613 -VEGPVQGAQALGSSFKPVQAPGSGAPAPAGISGSDLQSSGGPLPDARPGAVQASSPA 669



 Score = 39.3 bits (90), Expect = 0.008
 Identities = 36/98 (36%), Positives = 42/98 (42%), Gaps = 9/98 (9%)

Query: 385 FPLLYPGIPAP---AAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPL 441
           FP    G P     +AAAA AAAAAAAAAA    ++  +P P  A AAA  L       L
Sbjct: 480 FPPQQAGSPLKRPFSAAAAIAAAAAAAAAA-AAAAAAAAPAPALAAAAAPALAAAAAPAL 538

Query: 442 GAPHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGK 479
            A     P      P A P     P ++A   PS   K
Sbjct: 539 AAAAAPAP-----APAAAPAVAAAPAAAASAAPSHSQK 571


>gi|122937321 UNC homeobox [Homo sapiens]
          Length = 531

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 82/306 (26%), Positives = 107/306 (34%), Gaps = 41/306 (13%)

Query: 185 PLSKGTGAPS--AAGSAAAPCLERAGQKLEPLAYCVPVI---QRTQPSAELAAENDTDTD 239
           P +KG GA +  AAG+A AP     G+   P   C P     QR+    +       D D
Sbjct: 252 PAAKGPGAHASGAAGTAPAP----PGEPPAP-GTCDPAFYPSQRSGAGPQPRPGRPADKD 306

Query: 240 SGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGP--GGGA 297
           +   G   A    E+G            E    DSP P+R    +    +  G     G 
Sbjct: 307 AASCGPGAAVAAVERGAAGLPKASPFSVESLLSDSP-PRRKAASNAAAAAAAGLDFAPGL 365

Query: 298 AAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQ---PAAAAAPFCLPFCFL 354
             A   L+G        + +P   L+      GG G  P P+   PA A  P        
Sbjct: 366 PCAPRTLIGKGHFLLYPITQPLGFLVPQAALKGGAGLEPAPKDAPPAPAVPP-------- 417

Query: 355 SPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPC 414
           +P A A++   F    G     +  A  +P  +  PG PAPA A     A+AAA      
Sbjct: 418 APPAQASF-GAFSGPGGAPDSAF--ARRSPDAVASPGAPAPAPAPFRDLASAAATE---- 470

Query: 415 LSSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDP 474
                    + A A  A   P   AP   P P+ P      P   P   G PE  A   P
Sbjct: 471 -----GGGGDCADAGTAGPAPPPPAPSPRPGPRPPS-----PAEEPATCGVPEPGAAAGP 520

Query: 475 SQPGKE 480
           S P  E
Sbjct: 521 SPPEGE 526



 Score = 31.6 bits (70), Expect = 1.7
 Identities = 43/128 (33%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 330 GGGGGAPFP-QPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSG--LEKYLYPAAAAAPFP 386
           GGGG +P P +P   AA    P    S +A  A   P    +    +   YP+  +   P
Sbjct: 238 GGGGLSPEPPEPPPPAAKG--PGAHASGAAGTAPAPPGEPPAPGTCDPAFYPSQRSGAGP 295

Query: 387 LLYPGIPAPAAAA-----AAAAAAAAAAAAFP-----CLSSVL--SPPPEKA--GAAAAT 432
              PG PA   AA     AA AA    AA  P      + S+L  SPP  KA   AAAA 
Sbjct: 296 QPRPGRPADKDAASCGPGAAVAAVERGAAGLPKASPFSVESLLSDSPPRRKAASNAAAAA 355

Query: 433 LLPHEVAP 440
               + AP
Sbjct: 356 AAGLDFAP 363


>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
          Length = 474

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 54/167 (32%), Positives = 68/167 (40%), Gaps = 13/167 (7%)

Query: 249 RPDRE-KGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGP 307
           RP ++ K   A +S        PGE           S GGG GGG GGG++ A     G 
Sbjct: 129 RPRKKVKSGNANSSSSAAASSKPGEKGDKVG----GSGGGGHGGGGGGGSSNAGGG--GG 182

Query: 308 DPAAAAALLRP-DAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPF 366
             +   A  +P       S VA G GGG   P      A   L        AAAA    F
Sbjct: 183 GASGGGANSKPAQKKSCGSKVAGGAGGGVSKPH-----AKLILAGGGGGGKAAAAAAASF 237

Query: 367 LDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFP 413
             +      L P  AAA    LY      A+A+A++AA+A+AA A P
Sbjct: 238 AAEQAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAP 284



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 66/247 (26%), Positives = 89/247 (36%), Gaps = 21/247 (8%)

Query: 241 GYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGG----------SG 290
           G+GG          G G GAS      +P  + S   K       GGG          +G
Sbjct: 165 GHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSK--VAGGAGGGVSKPHAKLILAG 222

Query: 291 GGPGGGAAAAAAALLGPDPAAAAALLRPDAAL--LSSLVAFGGGGGAPFPQPAAAAAPFC 348
           GG GG AAAAAAA    + A AAALL   AA    S   A      A     A+A+A   
Sbjct: 223 GGGGGKAAAAAAASFAAEQAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALA 282

Query: 349 LPFCFLS-PSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPL-LYPGIPAPAAAAAAAAAAA 406
            P   L+       Y+   L  S        A A    PL LY    A  +  A + +  
Sbjct: 283 APGKHLAEKKVKRVYLFGGLGTSSSPVGGVGAGADPSDPLGLYEEEGAGCSPDAPSLSGR 342

Query: 407 AAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPREPGNP 466
           ++AA+ P      SP   +  A+     P   AP  AP        +H   +      + 
Sbjct: 343 SSAASSPAAGR--SPADHRGYASLRAASP---APSSAPSHASSSASSHSSSSSSSGSSSS 397

Query: 467 ESSAQED 473
           +   ++D
Sbjct: 398 DDEFEDD 404


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 83/327 (25%), Positives = 114/327 (34%), Gaps = 45/327 (13%)

Query: 192  APSAAGSA-----------AAPCLE-RAGQKLEPLA-----YCVPVIQRTQPSAELAAEN 234
            AP   GSA           AAP +  R G   +PL      + VPV    QP +++    
Sbjct: 908  APPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPPSKIIQLT 967

Query: 235  DTDTDSGYGGEAEARPDREKGKGA--------GASRVTIKQEPPGEDSPAPKRMKLDSRG 286
                 +  G      P    G  +         ++R+T  Q   G   P          G
Sbjct: 968  PVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHALPLGTSPASSQAG 1027

Query: 287  GGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQP------ 340
              +  GP    A    +L    PA    LL    A    L+A G  G +P P P      
Sbjct: 1028 TVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQA---PLLAPGQVGVSPVPSPQLPPAC 1084

Query: 341  AAAAAPFCLPFCFLSPS--AAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAA 398
            AA   P    F   SP+  ++A   QP      L   +  +       +L  G PAPA A
Sbjct: 1085 AAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPPAPATA 1144

Query: 399  AAAAAAAAAAAAAFPCLSSVLSPP--------PEKAGAAAATLLPHEVAPLGAPHPQHPH 450
              A  +   +A A     S+++P         P+K  AA A++ P      GA     P 
Sbjct: 1145 TPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASI-PVGSFEAGASGRPGPA 1203

Query: 451  GRTHLPFAGPREPGNPESSAQEDPSQP 477
             R  L     REP  PES  +  P+ P
Sbjct: 1204 PRQPLEPGPVREPTAPESELEGQPTPP 1230



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 53/195 (27%), Positives = 71/195 (36%), Gaps = 37/195 (18%)

Query: 270 PGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAF 329
           PG  +PAP  ++  ++G   GG   G  A A +   GP P     +L+P         A 
Sbjct: 768 PGYGAPAPPAVQFIAQGAPGGGTTAGSGAGAGSGPNGPVP---LGILQPG--------AL 816

Query: 330 GGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLY 389
           G  GG    Q      P  L    ++P+ A A        SG           AP   + 
Sbjct: 817 GKAGGITQVQYILPTLPQQLQ---VAPAPAPAPGTKAAAPSG----------PAPTTSIR 863

Query: 390 PGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPHP--- 446
             +P   +      AA A     P L SV S PP KA           V+P+ AP P   
Sbjct: 864 FTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKA---------QSVSPVQAPPPGGS 914

Query: 447 -QHPHGRTHLPFAGP 460
            Q   G+  +P A P
Sbjct: 915 AQLLPGKVLVPLAAP 929



 Score = 32.7 bits (73), Expect = 0.75
 Identities = 26/76 (34%), Positives = 29/76 (38%), Gaps = 7/76 (9%)

Query: 405  AAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPREPG 464
            AA      P   + L  PP    AAA    P   +P G P P  P   +    A P  P 
Sbjct: 1521 AATPTEQPPGAEAPLPVPPPTGTAAAPAPTP---SPAGGPDPTSPSSDSGTAQAAPPLPP 1577

Query: 465  NPESSAQEDPSQPGKE 480
             PES     P QPG E
Sbjct: 1578 PPESG----PGQPGWE 1589


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 57/173 (32%), Positives = 67/173 (38%), Gaps = 21/173 (12%)

Query: 293 PGGGAAAAAAALLGP---DPAAAA-ALLRPDAALLSSLVAFGGGGGAPFPQPA------A 342
           P  G  AAA A + P   DP+AA+     P AA+ +++ A      A  P  A      A
Sbjct: 108 PAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPA 167

Query: 343 AAAPFCLPFCFLSPSAAA------AYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPA 396
           AA P     C  SP AA       A V P     G       +  AA  P   P   +PA
Sbjct: 168 AADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPA 227

Query: 397 AAAA-----AAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAP 444
           AAA      AAAA AAAA A  C+ SV   P      A     P    P   P
Sbjct: 228 AAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVP 280



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 46/132 (34%), Positives = 51/132 (38%), Gaps = 33/132 (25%)

Query: 309 PAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLD 368
           PAAA A +RP AA        G    AP     AAA P     C  SP AA         
Sbjct: 98  PAAAPAAVRPPAA--------GPPAAAPAAVCPAAADPSAASLCAASPPAAV-------- 141

Query: 369 KSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGA 428
                    PAA  A         P  A   AAA AA   AAA P  +S+ +  P  A  
Sbjct: 142 ---------PAAVPAAVR------PPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVP 186

Query: 429 AAATLLPHEVAP 440
           AAA+  P  VAP
Sbjct: 187 AAAS--PAAVAP 196



 Score = 38.9 bits (89), Expect = 0.010
 Identities = 50/153 (32%), Positives = 60/153 (39%), Gaps = 12/153 (7%)

Query: 293 PGGGAAAAAAALLGPDPAAAAALLRPDAA--LLSSLVAFGGGGGAPFPQPAAAAAPFCLP 350
           P    AA      GP PAAA A + P AA    +SL A       P     AA AP  + 
Sbjct: 142 PAAVPAAVRPPAAGP-PAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVC 200

Query: 351 FCFLSPSAAA--AYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAA 408
                PSAA+  A  QP    + +     PAAAA   PL      A  AAAA AAA   +
Sbjct: 201 PGAAGPSAASLCAASQP----AAVPAAASPAAAA---PLAVNPAAAARAAAAPAAACVQS 253

Query: 409 AAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPL 441
            A  P     ++ P     A     +P   A L
Sbjct: 254 VAESPATPLAIAQPVSFPPAPVPCAVPPLAAEL 286



 Score = 32.3 bits (72), Expect = 0.98
 Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 365 PFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAA-AAAAFPCLSSVLSPPP 423
           P +  S L + +    AAAP  +  P    PAAA AA   AAA  +AA  C +   SPP 
Sbjct: 83  PVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAA---SPPA 139

Query: 424 EKAGAAAATLLPHEVAPLGA 443
               A  A + P    P  A
Sbjct: 140 AVPAAVPAAVRPPAAGPPAA 159


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 58/218 (26%), Positives = 74/218 (33%), Gaps = 24/218 (11%)

Query: 268 EPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLV 327
           +P G  + A +       G G G GPG G  A   A    + +AA       AA   SLV
Sbjct: 159 KPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLV 218

Query: 328 AFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPL 387
             G     P P+PAA       P              PF+  +       P+  AAP P 
Sbjct: 219 NNGPAALLPLPKPAAPGTVIQTP--------------PFVGAAAPPAPAAPSPPAAPAPA 264

Query: 388 LYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPP---EKAGAAAATLLPHEVAPLGAP 444
                P P   A A  A      A P  ++   PPP   +  G+A A       AP  AP
Sbjct: 265 APAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGA-------APAPAP 317

Query: 445 HPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGKEAP 482
               P G +  P  G            E P +  + AP
Sbjct: 318 AAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAP 355



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 69/252 (27%), Positives = 82/252 (32%), Gaps = 47/252 (18%)

Query: 255 GKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAA 314
           G  AGA+         G    AP+         G GG    G  +    L+   PA  AA
Sbjct: 65  GSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAA 124

Query: 315 LLRP----DAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKS 370
            LRP     A   + + A       P P PA  A P         P+A AA   P     
Sbjct: 125 KLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKP-------AGPAALAARAGP----- 172

Query: 371 GLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAA----AAFPCLSSV------LS 420
                  P     P P   PG PA   AA     +AA      AA P +S V      L 
Sbjct: 173 ------GPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALL 226

Query: 421 PPPEKAG-----------AAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGP----REPGN 465
           P P+ A             AAA   P   +P  AP P  P      P   P    R PG+
Sbjct: 227 PLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGH 286

Query: 466 PESSAQEDPSQP 477
           P       P+ P
Sbjct: 287 PAGPPTAAPAVP 298



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 64/239 (26%), Positives = 73/239 (30%), Gaps = 78/239 (32%)

Query: 284 SRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAA 343
           S  G +G GP   A  A  A   P PA  A   RP            GGGG   P P + 
Sbjct: 66  SPAGAAGAGPAAPAEGAPGAAPEPPPAGRA---RP------------GGGGPQRPGPPSP 110

Query: 344 AAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAA 403
             P       L P+  A                 PAA   P P    G  AP  AAAA A
Sbjct: 111 RRP-------LVPAGPAP----------------PAAKLRPPPEGSAGSCAPVPAAAAVA 147

Query: 404 AAAAAAAAFP-------CLSSVLSP-------------PPEKAGAAAATLLPHEVAPLGA 443
           A    A A P        L++   P             P + AG  AA  L    A L +
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNS 207

Query: 444 PHPQHP-------HGRTHLPFAGPREPGN-------------PESSAQEDPSQPGKEAP 482
            H   P            LP   P  PG              P  +A   P+ P   AP
Sbjct: 208 HHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAP 266



 Score = 36.6 bits (83), Expect = 0.052
 Identities = 43/180 (23%), Positives = 59/180 (32%), Gaps = 26/180 (14%)

Query: 270 PGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAF 329
           P   +PA         GG +G  P    AA   A +   P   AA   P   + +     
Sbjct: 290 PPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKR 349

Query: 330 GGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLY 389
                 P  Q  AA+ P        + +AA+  + P +  +       PAA   P P   
Sbjct: 350 VVQAAPPAAQTLAASGP--------ASTAASMVIGPTMQGA----LPSPAAVPPPAPGTP 397

Query: 390 PGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHP 449
            G+P  AA A                 S+   P        ATL P  +AP     PQ+P
Sbjct: 398 TGLPKGAAGAVT--------------QSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNP 443


>gi|24432032 zinc finger protein 503 [Homo sapiens]
          Length = 646

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 55/187 (29%), Positives = 76/187 (40%), Gaps = 33/187 (17%)

Query: 298 AAAAAALLGPDPAAAAALLRPDAALL----------SSLVAFGGGGGAPFPQPAAAAAPF 347
           AAAA+A    DPAAAAA L+    L+          SSL A    G  P   P+ A  P 
Sbjct: 444 AAAASASCAHDPAAAAAALKSGYPLVYPTHPLHGVHSSLTAAAAAGATP---PSLAGHPL 500

Query: 348 CLPFCFLSPSAAAAYVQPFLDKSG--------LEKYLYPAAAAAPFP---LLYPGIPAPA 396
             P+ F+ P+    ++  ++  +G         E+ L        FP    L  G P+ +
Sbjct: 501 -YPYGFMLPNDPLPHICNWVSANGPCDKRFATSEELLSHLRTHTAFPGTDKLLSGYPSSS 559

Query: 397 AAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLP 456
           + A+AAAAA A     P   +  SP         A   PH    LG     HP+ ++ LP
Sbjct: 560 SLASAAAAAMACHMHIPTSGAPGSP------GTLALRSPHHA--LGLSSRYHPYSKSPLP 611

Query: 457 FAGPREP 463
             G   P
Sbjct: 612 TPGAPVP 618



 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 80/354 (22%), Positives = 114/354 (32%), Gaps = 119/354 (33%)

Query: 185 PLSKGTGAPSAAGSAAAPCLERAGQKLEPLAYCVPVIQRT-QPSAELAAENDTDTDSGYG 243
           P   G G     G       E++G ++ P A C P   RT  PS+  +A +     S  G
Sbjct: 188 PGGGGGGGGGGGGGGGGVSSEKSGFRV-PSATCQPFTPRTGSPSSSASACSPGGMLSSAG 246

Query: 244 GEAEARPDREK------GKGAGAS--------------------RVTIKQEPPGEDSPAP 277
           G  E + D++       GKG G +                     V + Q P G   P  
Sbjct: 247 GAPEGKDDKKDTDVGGGGKGTGGASAEGGPTGLAHGRISCGGGINVDVNQHPDG--GPGG 304

Query: 278 KRMKLDSRGGGSGGGPGGGAAA-AAAALLGPDPAAAAALLRPD----------------- 319
           K +  D  GG SG   G G +A  ++++LG    A  +  +P                  
Sbjct: 305 KALGSDC-GGSSGSSSGSGPSAPTSSSVLGSGLVAPVSPYKPGQTVFPLPPAGMTYPGSL 363

Query: 320 -----------------------AALLSSLVAFGGGGGAPFPQPAAAAA----------- 345
                                   +L+ + +A    G     +PA ++            
Sbjct: 364 AGAYAGYPPQFLPHGVALDPTKPGSLVGAQLAAAAAGSLGCSKPAGSSPLAGASPPSVMT 423

Query: 346 ------PFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAP----FPLLYPGIPAP 395
                 P+CL +   S  A AA                PAAAAA     +PL+YP  P  
Sbjct: 424 ASLCRDPYCLSYHCASHLAGAAAASASCAHD-------PAAAAAALKSGYPLVYPTHPLH 476

Query: 396 AAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHP 449
              ++  AAAAA A            PP  AG        H + P G   P  P
Sbjct: 477 GVHSSLTAAAAAGAT-----------PPSLAG--------HPLYPYGFMLPNDP 511



 Score = 33.1 bits (74), Expect = 0.58
 Identities = 36/129 (27%), Positives = 48/129 (37%), Gaps = 22/129 (17%)

Query: 264 TIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGP---------DPAAAAA 314
           T  Q    + SP+ K   + S GGG+GG  GGGAA       GP         D ++   
Sbjct: 119 TCSQIGKPDPSPSSKLSSVASNGGGAGGA-GGGAAGDKDTKSGPLKLSDIGVEDKSSFKP 177

Query: 315 LLRPDAALLSSLVAFGGGGG------------APFPQPAAAAAPFCLPFCFLSPSAAAAY 362
             +P +         GGGGG            + F  P+A   PF       S SA+A  
Sbjct: 178 YSKPGSDKKEPGGGGGGGGGGGGGGGGVSSEKSGFRVPSATCQPFTPRTGSPSSSASACS 237

Query: 363 VQPFLDKSG 371
               L  +G
Sbjct: 238 PGGMLSSAG 246



 Score = 30.8 bits (68), Expect = 2.9
 Identities = 19/78 (24%), Positives = 32/78 (41%)

Query: 226 PSAELAAENDTDTDSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSR 285
           PS++L++       +G  G   A     K      S + ++ +   +    P   K +  
Sbjct: 130 PSSKLSSVASNGGGAGGAGGGAAGDKDTKSGPLKLSDIGVEDKSSFKPYSKPGSDKKEPG 189

Query: 286 GGGSGGGPGGGAAAAAAA 303
           GGG GGG GGG     ++
Sbjct: 190 GGGGGGGGGGGGGGGVSS 207



 Score = 30.4 bits (67), Expect = 3.7
 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 21/74 (28%)

Query: 274 SPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGG 333
           +P+   ++     GG GGG GGG         G DPA  +AL            +    G
Sbjct: 4   APSLSALRSSKHSGGGGGGGGGG---------GADPAWTSAL------------SGNSSG 42

Query: 334 GAPFPQPAAAAAPF 347
             P   PA +  PF
Sbjct: 43  PGPGSSPAGSTKPF 56


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 91/335 (27%), Positives = 114/335 (34%), Gaps = 67/335 (20%)

Query: 189 GTGAPSAAGSA--AAPCLERAGQKLEPLAYCVPVIQRTQPSAELAAENDTDTDSGYGGEA 246
           G+ AP++ G    A PC ++ G +  P             SA  AA     +        
Sbjct: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPG-------MGMMHSASAAAAGAPGSMDPLQNSH 229

Query: 247 EARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLG 306
           E  P+ +     G SR       PG              GGGSGGG GGG A A  A  G
Sbjct: 230 EGYPNSQCNHYPGYSR-------PGAGGGGGGG---GGGGGGSGGGGGGGGAGAGGAGAG 279

Query: 307 PDPAAAAALLRPDA--------------ALLSS--------LVAFGGGGGAPFPQPAA-A 343
              AAAAA                     +LSS        ++  GGGG A   + AA +
Sbjct: 280 AVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339

Query: 344 AAPFCLPFCFLS--PSAAAAYVQPFLDKSG--LEKY--LYPAAAAAPFPLLYPGIPAPAA 397
           AA     F   +  PS A   +   L      +  Y   YP  ++   P   P  P   A
Sbjct: 340 AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399

Query: 398 AAAAAAAAAAAAAAFPCLSSVLSPPPEKAGA--AAATLLPHEVAPLGAPHPQHPHGRTHL 455
           AAA AAA    AAA   L   +      A    AAA    H     G P P    GR+  
Sbjct: 400 AAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP--TMGRSQ- 456

Query: 456 PFAGPREP------------GNPESSAQEDPSQPG 478
               P +P             NP S  Q+    PG
Sbjct: 457 --GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
           [Homo sapiens]
          Length = 2231

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 91/335 (27%), Positives = 114/335 (34%), Gaps = 67/335 (20%)

Query: 189 GTGAPSAAGSA--AAPCLERAGQKLEPLAYCVPVIQRTQPSAELAAENDTDTDSGYGGEA 246
           G+ AP++ G    A PC ++ G +  P             SA  AA     +        
Sbjct: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPG-------MGMMHSASAAAAGAPGSMDPLQNSH 229

Query: 247 EARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLG 306
           E  P+ +     G SR       PG              GGGSGGG GGG A A  A  G
Sbjct: 230 EGYPNSQCNHYPGYSR-------PGAGGGGGGG---GGGGGGSGGGGGGGGAGAGGAGAG 279

Query: 307 PDPAAAAALLRPDA--------------ALLSS--------LVAFGGGGGAPFPQPAA-A 343
              AAAAA                     +LSS        ++  GGGG A   + AA +
Sbjct: 280 AVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339

Query: 344 AAPFCLPFCFLS--PSAAAAYVQPFLDKSG--LEKY--LYPAAAAAPFPLLYPGIPAPAA 397
           AA     F   +  PS A   +   L      +  Y   YP  ++   P   P  P   A
Sbjct: 340 AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399

Query: 398 AAAAAAAAAAAAAAFPCLSSVLSPPPEKAGA--AAATLLPHEVAPLGAPHPQHPHGRTHL 455
           AAA AAA    AAA   L   +      A    AAA    H     G P P    GR+  
Sbjct: 400 AAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP--TMGRSQ- 456

Query: 456 PFAGPREP------------GNPESSAQEDPSQPG 478
               P +P             NP S  Q+    PG
Sbjct: 457 --GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
           [Homo sapiens]
          Length = 2178

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 91/335 (27%), Positives = 114/335 (34%), Gaps = 67/335 (20%)

Query: 189 GTGAPSAAGSA--AAPCLERAGQKLEPLAYCVPVIQRTQPSAELAAENDTDTDSGYGGEA 246
           G+ AP++ G    A PC ++ G +  P             SA  AA     +        
Sbjct: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPG-------MGMMHSASAAAAGAPGSMDPLQNSH 229

Query: 247 EARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLG 306
           E  P+ +     G SR       PG              GGGSGGG GGG A A  A  G
Sbjct: 230 EGYPNSQCNHYPGYSR-------PGAGGGGGGG---GGGGGGSGGGGGGGGAGAGGAGAG 279

Query: 307 PDPAAAAALLRPDA--------------ALLSS--------LVAFGGGGGAPFPQPAA-A 343
              AAAAA                     +LSS        ++  GGGG A   + AA +
Sbjct: 280 AVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339

Query: 344 AAPFCLPFCFLS--PSAAAAYVQPFLDKSG--LEKY--LYPAAAAAPFPLLYPGIPAPAA 397
           AA     F   +  PS A   +   L      +  Y   YP  ++   P   P  P   A
Sbjct: 340 AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399

Query: 398 AAAAAAAAAAAAAAFPCLSSVLSPPPEKAGA--AAATLLPHEVAPLGAPHPQHPHGRTHL 455
           AAA AAA    AAA   L   +      A    AAA    H     G P P    GR+  
Sbjct: 400 AAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP--TMGRSQ- 456

Query: 456 PFAGPREP------------GNPESSAQEDPSQPG 478
               P +P             NP S  Q+    PG
Sbjct: 457 --GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489


>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
          Length = 793

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 79/317 (24%), Positives = 99/317 (31%), Gaps = 81/317 (25%)

Query: 183 QVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLAYCVPVIQRTQPSAELAAENDTDTDSGY 242
           Q P      APSA G  AAPC  R  ++ EP         + QP                
Sbjct: 87  QRPREPPAAAPSAGG--AAPCSPRGARRGEP--------PQQQPRRR------------- 123

Query: 243 GGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAA 302
               E  P+ E    A  +        PG DS      +   +GGGS G PG      AA
Sbjct: 124 --RREKEPEEEPAGAAARAADAACNGLPGSDS-----RRAPGKGGGSKGSPGQRPPVPAA 176

Query: 303 ALLGPDPAAAAALLRPDA-----ALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPS 357
           A  G    A+ A  +         L ++L    G  GA  P  A A              
Sbjct: 177 AAAGAQARASCAAAKTQGRCCWECLQNNLAVLPGELGA-LPHSATA-------------E 222

Query: 358 AAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCLSS 417
              A   P  D  G  +     A A P P     +PA A +  A   AA + A+ P    
Sbjct: 223 EKPARALPAQDDRGASREREEGALAEPAP-----VPAVAHSPPATVEAATSRASPP---- 273

Query: 418 VLSPPPEKAGAAAATLLP------------HEVAPLGAPHPQHPHGRTHLPFAG------ 459
            L P P   G     L P                   A HPQ P  R   P         
Sbjct: 274 ALLPGPAPRGDRPELLTPSSLHYSTLQQQQQRTREWVARHPQVPEARDQGPIRAWSVLPD 333

Query: 460 -----PREPGNPESSAQ 471
                P EPG+ E +++
Sbjct: 334 NFLQLPLEPGSTEPNSE 350


>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
           sapiens]
          Length = 254

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 51/157 (32%), Positives = 63/157 (40%), Gaps = 10/157 (6%)

Query: 293 PGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFP---QPAAAAAPFCL 349
           P    AA      GP PAAA A++ P AA  S+          P P   +P  A  P   
Sbjct: 17  PAAAPAAVRPPAAGP-PAAAPAVVYPAAAGPSAASLCAANPLVPAPAAVRPPVAGPPATA 75

Query: 350 PFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAA 409
           P   + P+AA          + L   + PAA   P   L    PA  A AA   AAA+ +
Sbjct: 76  P-AVVCPAAAGPSAASLRAANPLA--VAPAAVRRPAATLGAASPAAVAPAAVCPAAASPS 132

Query: 410 AAFPCLSSVLSPPPEKAGAAAATLL---PHEVAPLGA 443
           AA  C +S  +  P  A  AAA  L   P   AP  A
Sbjct: 133 AASLCAASPTAAAPAAASPAAAAPLAVNPAAAAPAAA 169



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 48/149 (32%), Positives = 57/149 (38%), Gaps = 33/149 (22%)

Query: 296 GAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLS 355
           G +AA+     P   A AA+ RP A L ++  A      AP     AAA+P     C  S
Sbjct: 85  GPSAASLRAANPLAVAPAAVRRPAATLGAASPA----AVAPAAVCPAAASPSAASLCAAS 140

Query: 356 PSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAAFPCL 415
           P+AAA                 PAAA+            PAAAA  A   AAAA A  C+
Sbjct: 141 PTAAA-----------------PAAAS------------PAAAAPLAVNPAAAAPAAACV 171

Query: 416 SSVLSPPPEKAGAAAATLLPHEVAPLGAP 444
            SV   P      A     P   AP   P
Sbjct: 172 QSVAESPATPLAIAQPVSSPAAPAPCAVP 200



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 65/201 (32%), Positives = 78/201 (38%), Gaps = 30/201 (14%)

Query: 300 AAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAAAAPFCLPFCFLSPSA- 358
           AAA      PAAA A +RP AA        G    AP     AAA P     C  +P   
Sbjct: 8   AAAKTSVRRPAAAPAAVRPPAA--------GPPAAAPAVVYPAAAGPSAASLCAANPLVP 59

Query: 359 AAAYVQPFL--DKSGLEKYLYPAAA---AAPFPLLYPGIPAPAAA------------AAA 401
           A A V+P +    +     + PAAA   AA      P   APAA             AA 
Sbjct: 60  APAAVRPPVAGPPATAPAVVCPAAAGPSAASLRAANPLAVAPAAVRRPAATLGAASPAAV 119

Query: 402 AAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPHPQHPHGRTHLPFAGPR 461
           A AA   AAA P  +S+ +  P  A  AAA+  P   APL A +P           +   
Sbjct: 120 APAAVCPAAASPSAASLCAASPTAAAPAAAS--PAAAAPL-AVNPAAAAPAAACVQSVAE 176

Query: 462 EPGNPESSAQEDPSQPGKEAP 482
            P  P + AQ   S P   AP
Sbjct: 177 SPATPLAIAQ-PVSSPAAPAP 196



 Score = 35.8 bits (81), Expect = 0.089
 Identities = 38/134 (28%), Positives = 48/134 (35%), Gaps = 8/134 (5%)

Query: 258 AGASRVTIKQEPPGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLR 317
           AG S  +++   P   +PA  R    + G  S   P   A AA         AA+     
Sbjct: 84  AGPSAASLRAANPLAVAPAAVRRPAATLGAAS---PAAVAPAAVCPAAASPSAASLCAAS 140

Query: 318 PDAALLSSLVAFGGGGGAPFPQPAAAAAP--FCLPFCFLSPSAAAAYVQPFLDKSGLEKY 375
           P AA   +  A      AP     AAAAP   C+     SP+   A  QP    +     
Sbjct: 141 PTAA---APAAASPAAAAPLAVNPAAAAPAAACVQSVAESPATPLAIAQPVSSPAAPAPC 197

Query: 376 LYPAAAAAPFPLLY 389
             P  AA P  L Y
Sbjct: 198 AVPPLAAEPTALAY 211


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,467,339
Number of Sequences: 37866
Number of extensions: 1448997
Number of successful extensions: 18811
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 872
Number of HSP's that attempted gapping in prelim test: 10907
Number of HSP's gapped (non-prelim): 4532
length of query: 482
length of database: 18,247,518
effective HSP length: 106
effective length of query: 376
effective length of database: 14,233,722
effective search space: 5351879472
effective search space used: 5351879472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.