Guide to the Human Genome
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Name: HES1 Sequence: fasta or formatted (280aa) NCBI GI: 5031763
Description:

hairy and enhancer of split 1

Referenced in:

Notch Pathway
Helix-Loop-Helix Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         30           2
 C cysteine            1.4          4           1
 D aspartate           2.9          8           1
 E glutamate           3.9         11           1
 F phenylalanine       2.9          8           1
 G glycine             7.9         22           2
 H histidine           2.5          7           1
 I isoleucine          3.2          9           1
 K lysine              5.4         15           2
 L leucine             7.1         20           2
 M methionine          3.2          9           1
 N asparagine          4.3         12           1
 P proline            13.6         38           6
 Q glutamine           3.6         10           1
 R arginine            5.0         14           3
 S serine              9.3         26           3
 T threonine           6.1         17           2
 V valine              5.4         15           2
 W tryptophan          0.7          2           1
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hairy and enhancer of split 1 
HES4                  0.384   hairy and enhancer of split 4 isoform 2 
HES4                  0.358   hairy and enhancer of split 4 isoform 1 
HES2                  0.162   hairy and enhancer of split homolog 2 
HES6                  0.135   hairy and enhancer of split 6 isoform b 
HES6                  0.135   hairy and enhancer of split 6 isoform a 
HEY2                  0.125   hairy/enhancer-of-split related with YRPW motif 2 [Ho...
HEY1                  0.125   hairy/enhancer-of-split related with YRPW motif 1 i...
HEY1                  0.120   hairy/enhancer-of-split related with YRPW motif 1 i...
HEYL                  0.118   hairy/enhancer-of-split related with YRPW motif-like ...
HES5                  0.096   hairy and enhancer of split 5 
HES3                  0.096   hairy and enhancer of split 3 
HES7                  0.087   hairy and enhancer of split 7 
BHLHE41               0.071   basic helix-loop-helix domain containing, class B, 3...
BHLHE40               0.067   basic helix-loop-helix family, member e40 
ANXA11                0.056   annexin A11 
ANXA11                0.056   annexin A11 
ANXA11                0.056   annexin A11 
HELT                  0.049   HES/HEY-like transcription factor 
WASF2                 0.049   WAS protein family, member 2 
DAAM1                 0.049   dishevelled-associated activator of morphogenesis 1 ...
WASL                  0.047   Wiskott-Aldrich syndrome gene-like protein 
COL17A1               0.045   alpha 1 type XVII collagen 
SF3B4                 0.044   splicing factor 3b, subunit 4 
FMNL1                 0.044   formin-like 1 
FMN1                  0.044   formin 1 
ZCCHC2                0.042   zinc finger, CCHC domain containing 2 
RAPH1                 0.040   Ras association and pleckstrin homology domains 1 is...
SETD1B                0.040   SET domain containing 1B 
FHDC1                 0.040   FH2 domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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