Guide to the Human Genome
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Name: OR5M10 Sequence: fasta or formatted (315aa) NCBI GI: 52317261
Description:

olfactory receptor, family 5, subfamily M, member 10

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         19           2
 C cysteine            3.8         12           1
 D aspartate           2.2          7           2
 E glutamate           2.9          9           2
 F phenylalanine       8.6         27           2
 G glycine             3.8         12           1
 H histidine           2.5          8           1
 I isoleucine          9.2         29           2
 K lysine              3.2         10           2
 L leucine            14.3         45           2
 M methionine          4.1         13           1
 N asparagine          3.5         11           1
 P proline             3.8         12           2
 Q glutamine           2.2          7           2
 R arginine            3.5         11           1
 S serine              9.5         30           3
 T threonine           6.3         20           1
 V valine              5.7         18           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.8         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily M, member 10... 
OR5M1                 0.958   olfactory receptor, family 5, subfamily M, member 1 ...
OR5M11                0.658   olfactory receptor, family 5, subfamily M, member 11...
OR5M8                 0.618   olfactory receptor, family 5, subfamily M, member 8 ...
OR5M3                 0.573   olfactory receptor, family 5, subfamily M, member 3 ...
OR5M9                 0.573   olfactory receptor, family 5, subfamily M, member 9 ...
OR5R1                 0.525   olfactory receptor, family 5, subfamily R, member 1 ...
OR8U1                 0.515   olfactory receptor, family 8, subfamily U, member 1 ...
OR5AR1                0.513   olfactory receptor, family 5, subfamily AR, member 1...
OR8U8                 0.512   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U9                 0.510   olfactory receptor, family 8, subfamily U, member 9 ...
OR9G4                 0.490   olfactory receptor, family 9, subfamily G, member 4 ...
OR5B12                0.482   olfactory receptor, family 5, subfamily B, member 12...
OR5B21                0.482   olfactory receptor, family 5, subfamily B, member 21...
OR5AP2                0.470   olfactory receptor, family 5, subfamily AP, member 2...
OR5F1                 0.465   olfactory receptor, family 5, subfamily F, member 1 ...
OR8D4                 0.462   olfactory receptor, family 8, subfamily D, member 4 ...
OR5A2                 0.462   olfactory receptor, family 5, subfamily A, member 2 ...
OR8I2                 0.458   olfactory receptor, family 8, subfamily I, member 2 ...
OR8D1                 0.458   olfactory receptor, family 8, subfamily D, member 1 ...
OR5AU1                0.455   olfactory receptor, family 5, subfamily AU, member 1...
OR5I1                 0.453   olfactory receptor, family 5, subfamily I, member 1 [...
OR8A1                 0.453   olfactory receptor, family 8, subfamily A, member 1 ...
OR5AS1                0.450   olfactory receptor, family 5, subfamily AS, member 1...
OR8D2                 0.449   olfactory receptor, family 8, subfamily D, member 2 ...
OR5P2                 0.449   olfactory receptor, family 5, subfamily P, member 2 ...
OR8K1                 0.447   olfactory receptor, family 8, subfamily K, member 1 ...
OR8K3                 0.447   olfactory receptor, family 8, subfamily K, member 3 ...
OR5A1                 0.445   olfactory receptor, family 5, subfamily A, member 1 ...
OR5J2                 0.445   olfactory receptor, family 5, subfamily J, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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