Guide to the Human Genome
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Name: OR8B8 Sequence: fasta or formatted (311aa) NCBI GI: 28570170
Description:

olfactory receptor, family 8, subfamily B, member 8

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         20           2
 C cysteine            3.2         10           1
 D aspartate           2.3          7           1
 E glutamate           1.6          5           1
 F phenylalanine       9.6         30           3
 G glycine             5.5         17           1
 H histidine           1.9          6           1
 I isoleucine          6.8         21           2
 K lysine              3.5         11           2
 L leucine            12.9         40           4
 M methionine          5.1         16           2
 N asparagine          4.8         15           2
 P proline             3.5         11           1
 Q glutamine           1.9          6           1
 R arginine            1.3          4           1
 S serine              9.3         29           2
 T threonine           5.8         18           2
 V valine              9.6         30           3
 W tryptophan          0.0          0           0
 Y tyrosine            4.8         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily B, member 8 ... 
OR8B12                0.808   olfactory receptor, family 8, subfamily B, member 12...
OR8B3                 0.723   olfactory receptor, family 8, subfamily B, member 3 ...
OR8B2                 0.715   olfactory receptor, family 8, subfamily B, member 2 ...
OR8G1                 0.653   olfactory receptor, family 8, subfamily G, member 1 ...
OR8B4                 0.649   olfactory receptor, family 8, subfamily B, member 4 ...
OR8G5                 0.641   olfactory receptor, family 8, subfamily G, member 5 ...
OR8D1                 0.624   olfactory receptor, family 8, subfamily D, member 1 ...
OR8A1                 0.600   olfactory receptor, family 8, subfamily A, member 1 ...
OR8D4                 0.594   olfactory receptor, family 8, subfamily D, member 4 ...
OR8D2                 0.585   olfactory receptor, family 8, subfamily D, member 2 ...
OR8G2                 0.575   olfactory receptor, family 8, subfamily G, member 2 ...
OR8U1                 0.531   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U8                 0.531   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U9                 0.521   olfactory receptor, family 8, subfamily U, member 9 ...
OR5B12                0.516   olfactory receptor, family 5, subfamily B, member 12...
OR8J3                 0.511   olfactory receptor, family 8, subfamily J, member 3 ...
OR5AR1                0.499   olfactory receptor, family 5, subfamily AR, member 1...
OR5R1                 0.494   olfactory receptor, family 5, subfamily R, member 1 ...
OR5AU1                0.487   olfactory receptor, family 5, subfamily AU, member 1...
OR5W2                 0.487   olfactory receptor, family 5, subfamily W, member 2 ...
OR5D18                0.482   olfactory receptor, family 5, subfamily D, member 18...
OR5B21                0.479   olfactory receptor, family 5, subfamily B, member 21...
OR8I2                 0.477   olfactory receptor, family 8, subfamily I, member 2 ...
OR8J1                 0.477   olfactory receptor, family 8, subfamily J, member 1 ...
OR5A2                 0.477   olfactory receptor, family 5, subfamily A, member 2 ...
OR9I1                 0.472   olfactory receptor, family 9, subfamily I, member 1 ...
OR8H1                 0.472   olfactory receptor, family 8, subfamily H, member 1 ...
OR5A1                 0.465   olfactory receptor, family 5, subfamily A, member 1 ...
OR8H3                 0.465   olfactory receptor, family 8, subfamily H, member 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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