Guide to the Human Genome
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Name: OR5J2 Sequence: fasta or formatted (312aa) NCBI GI: 53828705
Description:

olfactory receptor, family 5, subfamily J, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         23           1
 C cysteine            3.2         10           1
 D aspartate           2.9          9           2
 E glutamate           2.9          9           1
 F phenylalanine       7.4         23           2
 G glycine             3.5         11           2
 H histidine           2.9          9           1
 I isoleucine          8.7         27           2
 K lysine              3.5         11           1
 L leucine            14.4         45           4
 M methionine          3.8         12           1
 N asparagine          2.6          8           1
 P proline             1.9          6           1
 Q glutamine           2.2          7           2
 R arginine            3.2         10           2
 S serine              9.6         30           2
 T threonine           7.1         22           2
 V valine              9.0         28           2
 W tryptophan          0.3          1           1
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily J, member 2 ... 
OR5AP2                0.526   olfactory receptor, family 5, subfamily AP, member 2...
OR8U9                 0.522   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U8                 0.521   olfactory receptor, family 8, subfamily U, member 8 ...
OR5I1                 0.519   olfactory receptor, family 5, subfamily I, member 1 [...
OR8U1                 0.519   olfactory receptor, family 8, subfamily U, member 1 ...
OR5W2                 0.519   olfactory receptor, family 5, subfamily W, member 2 ...
OR5T3                 0.510   olfactory receptor, family 5, subfamily T, member 3 ...
OR5D18                0.509   olfactory receptor, family 5, subfamily D, member 18...
OR8D1                 0.507   olfactory receptor, family 8, subfamily D, member 1 ...
OR5F1                 0.503   olfactory receptor, family 5, subfamily F, member 1 ...
OR5R1                 0.502   olfactory receptor, family 5, subfamily R, member 1 ...
OR5C1                 0.502   olfactory receptor, family 5, subfamily C, member 1 ...
OR9I1                 0.497   olfactory receptor, family 9, subfamily I, member 1 ...
OR5B12                0.497   olfactory receptor, family 5, subfamily B, member 12...
OR5L1                 0.495   olfactory receptor, family 5, subfamily L, member 1 ...
OR5AR1                0.495   olfactory receptor, family 5, subfamily AR, member 1...
OR5T1                 0.493   olfactory receptor, family 5, subfamily T, member 1 ...
OR8G5                 0.491   olfactory receptor, family 8, subfamily G, member 5 ...
OR5L2                 0.490   olfactory receptor, family 5, subfamily L, member 2 ...
OR5A2                 0.488   olfactory receptor, family 5, subfamily A, member 2 ...
OR5T2                 0.483   olfactory receptor, family 5, subfamily T, member 2 ...
OR5D16                0.476   olfactory receptor, family 5, subfamily D, member 16...
OR5AS1                0.474   olfactory receptor, family 5, subfamily AS, member 1...
OR8D4                 0.473   olfactory receptor, family 8, subfamily D, member 4 ...
OR8H3                 0.473   olfactory receptor, family 8, subfamily H, member 3 ...
OR8G1                 0.471   olfactory receptor, family 8, subfamily G, member 1 ...
OR8D2                 0.471   olfactory receptor, family 8, subfamily D, member 2 ...
OR5M11                0.471   olfactory receptor, family 5, subfamily M, member 11...
OR5B21                0.471   olfactory receptor, family 5, subfamily B, member 21...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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