LARP7 513

Name: LARP7	Sequence: fasta or formatted (582aa)		NCBI GI: 109809739
Description: La ribonucleoprotein domain family, member 7		Referenced in: RNA-binding Proteins
Other entries for this name: alt mRNA [582aa] La ribonucleoprotein domain family, member 7
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 33 2 C cysteine 0.9 5 1 D aspartate 5.2 30 1 E glutamate 11.5 67 3 F phenylalanine 2.2 13 1 G glycine 4.1 24 1 H histidine 1.7 10 1 I isoleucine 5.8 34 2 K lysine 15.5 90 8 L leucine 6.4 37 2 M methionine 1.9 11 1 N asparagine 3.4 20 2 P proline 4.0 23 2 Q glutamine 3.8 22 2 R arginine 6.7 39 2 S serine 7.7 45 3 T threonine 5.3 31 2 V valine 5.8 34 2 W tryptophan 0.9 5 1 Y tyrosine 1.5 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 La ribonucleoprotein domain family, member 7 LARP7 1.000 La ribonucleoprotein domain family, member 7 SSB 0.053 autoantigen La LARP6 0.049 La ribonucleoprotein domain family, member 6 isoform... SFRS12 0.036 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.036 splicing factor, arginine/serine-rich 12 isoform b [... EIF5B 0.030 eukaryotic translation initiation factor 5B LARP1 0.029 la related protein isoform 2 LARP1 0.029 la related protein isoform 1 RBMX2 0.029 RNA binding motif protein, X-linked 2 LARP4 0.028 c-Mpl binding protein isoform c LOC100133599 0.027 PREDICTED: hypothetical protein MKI67IP 0.027 MKI67 interacting nucleolar phosphoprotein RBM28 0.026 RNA binding motif protein 28 LARP4 0.026 c-Mpl binding protein isoform b MAP1B 0.026 microtubule-associated protein 1B LARP4 0.026 c-Mpl binding protein isoform a RBM34 0.026 RNA binding motif protein 34 isoform 1 FAM133B 0.025 hypothetical protein LOC257415 isoform 2 FAM133B 0.025 hypothetical protein LOC257415 isoform 1 CIR1 0.025 CBF1 interacting corepressor CYLC1 0.025 cylicin, basic protein of sperm head cytoskeleton 1... FAM133A 0.024 hypothetical protein LOC286499 NEFH 0.024 neurofilament, heavy polypeptide 200kDa TRDN 0.024 triadin CHD7 0.022 chromodomain helicase DNA binding protein 7 MAP1A 0.022 microtubule-associated protein 1A WDR87 0.022 NYD-SP11 protein BOD1L 0.022 biorientation of chromosomes in cell division 1-like... PRPF38B 0.022 PRP38 pre-mRNA processing factor 38 (yeast) domain ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.