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Search of human proteins with 61102723
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61102723 hypothetical protein LOC128710 [Homo sapiens]
(408 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61102723 hypothetical protein LOC128710 [Homo sapiens] 806 0.0
gi|223555917 metadherin [Homo sapiens] 37 0.032
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 37 0.042
gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens] 36 0.055
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 36 0.072
gi|224465235 euchromatic histone-lysine N-methyltransferase 1 is... 36 0.072
gi|224465233 euchromatic histone-lysine N-methyltransferase 1 is... 36 0.072
gi|54292123 lysosomal trafficking regulator [Homo sapiens] 35 0.094
gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1 ... 35 0.094
gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1 ... 35 0.094
gi|27886520 nuclear factor of activated T-cells 5 isoform a [Hom... 35 0.12
gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo... 35 0.12
gi|164419746 nuclear factor of activated T-cells 5 isoform d [Ho... 35 0.12
gi|164419744 nuclear factor of activated T-cells 5 isoform b [Ho... 35 0.12
gi|27886524 nuclear factor of activated T-cells 5 isoform a [Hom... 35 0.12
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 34 0.21
gi|87196343 PDZ domain containing 2 [Homo sapiens] 34 0.27
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 33 0.36
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 33 0.36
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 33 0.36
gi|151301154 mucin 6, gastric [Homo sapiens] 33 0.36
gi|4507397 transcription factor 2 [Homo sapiens] 33 0.47
gi|148612890 serine-arginine repressor protein [Homo sapiens] 33 0.47
gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo s... 33 0.47
gi|225543215 antigen identified by monoclonal antibody Ki-67 iso... 33 0.61
gi|103472005 antigen identified by monoclonal antibody Ki-67 iso... 33 0.61
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 33 0.61
gi|171543895 ataxin 2 [Homo sapiens] 32 0.79
gi|24497531 Ellis van Creveld syndrome protein [Homo sapiens] 32 0.79
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 32 1.0
>gi|61102723 hypothetical protein LOC128710 [Homo sapiens]
Length = 408
Score = 806 bits (2081), Expect = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MASKKFAVKCGNFAVLVDLHILPQGSNKDTSWFSEQKKEEVCLLLKETIDSRVQEYLEVR 60
MASKKFAVKCGNFAVLVDLHILPQGSNKDTSWFSEQKKEEVCLLLKETIDSRVQEYLEVR
Sbjct: 1 MASKKFAVKCGNFAVLVDLHILPQGSNKDTSWFSEQKKEEVCLLLKETIDSRVQEYLEVR 60
Query: 61 KQHRPSNAEFTRSNPLSLKGYGFQITAYFLKRGIRLRCIRSTQNAELCVFPDRFVVCVSQ 120
KQHRPSNAEFTRSNPLSLKGYGFQITAYFLKRGIRLRCIRSTQNAELCVFPDRFVVCVSQ
Sbjct: 61 KQHRPSNAEFTRSNPLSLKGYGFQITAYFLKRGIRLRCIRSTQNAELCVFPDRFVVCVSQ 120
Query: 121 LAFSRDLLASQNEDLTERVLHGVSDYFAECAESSLPPSAKLRRNALKEIVKRTETKSSVT 180
LAFSRDLLASQNEDLTERVLHGVSDYFAECAESSLPPSAKLRRNALKEIVKRTETKSSVT
Sbjct: 121 LAFSRDLLASQNEDLTERVLHGVSDYFAECAESSLPPSAKLRRNALKEIVKRTETKSSVT 180
Query: 181 SKSQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKL 240
SKSQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKL
Sbjct: 181 SKSQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKL 240
Query: 241 EKVNQTQPEDTSGQQKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCS 300
EKVNQTQPEDTSGQQKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCS
Sbjct: 241 EKVNQTQPEDTSGQQKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCS 300
Query: 301 SAEDFDHHGRVSLGSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTTSKEELH 360
SAEDFDHHGRVSLGSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTTSKEELH
Sbjct: 301 SAEDFDHHGRVSLGSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTTSKEELH 360
Query: 361 VLESLSSRHLMKNNPGQAQQTGLATNTERLSTIQNSPTKKRKKYERGH 408
VLESLSSRHLMKNNPGQAQQTGLATNTERLSTIQNSPTKKRKKYERGH
Sbjct: 361 VLESLSSRHLMKNNPGQAQQTGLATNTERLSTIQNSPTKKRKKYERGH 408
>gi|223555917 metadherin [Homo sapiens]
Length = 582
Score = 37.0 bits (84), Expect = 0.032
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 22/207 (10%)
Query: 207 DGQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPED-----TSGQQKPHPGE 261
D + + P+E G D +A+ P+ +KV+ E +G+ K +
Sbjct: 389 DPNSDWNAPAEEWGNWVDEERASLLKSQEPIPDDQKVSDDDKEKGEGALPTGKSKKKKKK 448
Query: 262 RLKTGLLSRSPVCSCESASPCPKQSP-RVAKTQQKRRNCSSAEDFDHHGRVSLGSDRLVP 320
+ K G + + + E + P +KT+ K+ S + SD P
Sbjct: 449 KKKQGEDNSTAQDTEELEKEIREDLPVNTSKTRPKQEKAFSLKTIST-------SD---P 498
Query: 321 REIIVEKSKAVRVLPASELSDPGLLL-KQDLAKTTSKEELHVLESLSSRHLMKNNPGQAQ 379
E++V+ S+ ++ LP + ++P ++L K D K++S+ + E+ S+ K N
Sbjct: 499 AEVLVKNSQPIKTLPPATSTEPSVILSKSDSDKSSSQVPPILQETDKSKSNTKQNSVPPS 558
Query: 380 QTGLATNTERLSTIQNSPTKKRKKYER 406
QT T+ E I KK+KK R
Sbjct: 559 QTKSETSWESPKQI-----KKKKKARR 580
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 36.6 bits (83), Expect = 0.042
Identities = 58/255 (22%), Positives = 93/255 (36%), Gaps = 60/255 (23%)
Query: 153 SSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASS 212
S+L SAK R+ +TE S V+ ++T R + +SS + + +
Sbjct: 1831 STLSSSAKTERHPPVSPSSKTEKHSPVSPSAKTERHSPASSSS---------KTEKHSPV 1881
Query: 213 SPPSESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRSP 272
SP +++ + S E H PV K ++ P SG+ + HP
Sbjct: 1882 SPSTKTERHSPVSSTKTERH--PPVSPSGKTDKRPPVSPSGRTEKHP------------- 1926
Query: 273 VCSCESASPCPKQSPRVAKTQQKRRNCSSAEDFDHHGRVSLGSDRLVPREIIVEKSKAVR 332
P +KR S + D H VS K +
Sbjct: 1927 --------------PVSPGRTEKRLPVSPSGRTDKHQPVSTA-------------GKTEK 1959
Query: 333 VLPASELSDPGLLLKQDLAKTTSKEELHVLESLSSRHLMKNNPGQAQQTGLATNTERLST 392
LP +S G KQ TSK E + E++S R LMK A Q+G + +
Sbjct: 1960 HLP---VSPSGKTEKQPPVSPTSKTE-RIEETMSVRELMK-----AFQSGQDPSKHKTGL 2010
Query: 393 IQNSPTKKRKKYERG 407
++ K+++ E+G
Sbjct: 2011 FEHKSAKQKQPQEKG 2025
>gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens]
Length = 694
Score = 36.2 bits (82), Expect = 0.055
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 143 VSDYFAECAESSLPPSAKL--RRNALKEIVKRTETKSSVTSKSQTR--RDTVETSSDSVI 198
+S+ +C S P AK+ +N+ ++ + T + + K+Q + + +S D+ +
Sbjct: 428 ISESPRKCISSPNTPKAKVIPAQNSA-DLPESTLLPNKCSGKTQPKYLKHNHISSRDNAV 486
Query: 199 AEIARRRNDGQASSSPPSESMG-QAKDSIKAAESHWGLPVQKLEKV--NQTQPEDTSGQQ 255
+ +A N P ++ + K S +++ + + Q+QP D + Q
Sbjct: 487 SHLAAHSNSSSKCPKLPKANIPVRPKPSFQSSAKMTKTSSKTIATGLGTQSQPSDGAPQA 546
Query: 256 KPHPGERLKTGLLSRSPVCSCESASPC-----PKQSPRVAKTQQKRRNCSSAEDFDHHGR 310
KP P ++LK+ L PV S S SP K V+ T+++ +N S+ F G
Sbjct: 547 KPVPAQKLKSALNLNQPV-SVSSVSPVKATQKSKDKNIVSATKKQPQNKSA---FQKTGP 602
Query: 311 VSLGSDRLVPREII 324
SL S P I+
Sbjct: 603 SSLKSPGRTPLSIV 616
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 35.8 bits (81), Expect = 0.072
Identities = 51/242 (21%), Positives = 90/242 (37%), Gaps = 42/242 (17%)
Query: 162 RRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASS----SPPSE 217
RRN ++I + +++S + KS R I + +RR S S SE
Sbjct: 1208 RRNQKRQINYKEDSESDGSQKSLRR--------GKEIRRVHKRRLSSSESEESYLSKNSE 1259
Query: 218 SMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRSPVCSCE 277
AK+S ++ + ++ ++ E+ + KP R + + SC+
Sbjct: 1260 DDELAKESKRSVRKRG----RSTDEYSEADEEEEEEEGKP---SRKRLHRIETDEEESCD 1312
Query: 278 SA-----SPCPKQSPRVAKTQQK------RRNCSSAEDFDHHGRVSLGSDRLVPREIIVE 326
+A P PRV ++Q+ R EDF++ G+V D
Sbjct: 1313 NAHGDANQPARDSQPRVLPSEQESTKKPYRIESDEEEDFENVGKVGSPLDY--------- 1363
Query: 327 KSKAVRVLPASELSDPGLLLKQDLAKTTSKEELHVLESLSSRHLMKNNPGQAQQTGLATN 386
++ LP++ PG ++ + K T K + S +S L N Q+ G
Sbjct: 1364 ---SLVDLPSTNGQSPGKAIENLIGKPTEKSQTPKDNSTASASLASNGTSGGQEAGAPEE 1420
Query: 387 TE 388
E
Sbjct: 1421 EE 1422
>gi|224465235 euchromatic histone-lysine N-methyltransferase 1
isoform 2 [Homo sapiens]
Length = 808
Score = 35.8 bits (81), Expect = 0.072
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 152 ESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQAS 211
ES L + +++ LK ++ +T S ++ RR + + + + G A
Sbjct: 413 ESDLSSESSIKKKFLK---RKGKTDSPWIKPARKRRRRSRKKPSGALGSESYKSSAGSAE 469
Query: 212 SSPPSESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRS 271
+ P +S G + S+ + + +++ + +Q E + + L+T L
Sbjct: 470 QTAPGDSTGYMEVSLDSLDL-------RVKGILSSQAEGLANGP-----DVLETDGLQEV 517
Query: 272 PVCSCESASPCPKQSPRVAKTQQKRRNCSSAEDFDHH-GRVSLGSDRLVPREIIVEKSKA 330
P+CSC +P ++ +A Q C + E DH GR ++ +V E++ +KA
Sbjct: 518 PLCSCRMETPKSREITTLANNQ-----CMATESVDHELGRC---TNSVVKYELMRPSNKA 569
>gi|224465233 euchromatic histone-lysine N-methyltransferase 1
isoform 1 [Homo sapiens]
Length = 1298
Score = 35.8 bits (81), Expect = 0.072
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 152 ESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQAS 211
ES L + +++ LK ++ +T S ++ RR + + + + G A
Sbjct: 413 ESDLSSESSIKKKFLK---RKGKTDSPWIKPARKRRRRSRKKPSGALGSESYKSSAGSAE 469
Query: 212 SSPPSESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRS 271
+ P +S G + S+ + + +++ + +Q E + + L+T L
Sbjct: 470 QTAPGDSTGYMEVSLDSLDL-------RVKGILSSQAEGLANGP-----DVLETDGLQEV 517
Query: 272 PVCSCESASPCPKQSPRVAKTQQKRRNCSSAEDFDHH-GRVSLGSDRLVPREIIVEKSKA 330
P+CSC +P ++ +A Q C + E DH GR ++ +V E++ +KA
Sbjct: 518 PLCSCRMETPKSREITTLANNQ-----CMATESVDHELGRC---TNSVVKYELMRPSNKA 569
>gi|54292123 lysosomal trafficking regulator [Homo sapiens]
Length = 3801
Score = 35.4 bits (80), Expect = 0.094
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 320 PREIIVEKSKAV---RVLPASELSDPGLLLKQDLAKTTSKEELHVLESLSSRHLMKNNPG 376
P +V+K K++ R P ++ LL+K ++ + +ELHV+ R + + NP
Sbjct: 2581 PHHAVVQKRKSIAGPRKFPLAQTES--LLMKM---RSVANDELHVM---MQRRMSQENPS 2632
Query: 377 QAQQTGLATNTERLSTI 393
QA +T LA +RL+ +
Sbjct: 2633 QATETELAQRLQRLTVL 2649
>gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 35.4 bits (80), Expect = 0.094
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 24/184 (13%)
Query: 20 HILPQGSNKDTSWFSEQKKEEVCLLLKETIDSRVQEYLEVRKQHRPSNAEFTRSNPLSLK 79
+I+ + + ++ + E++KEE LKE +DS QE ++K+ E L
Sbjct: 437 NIINETTTRNNALEKEKEKEEK--KLKEVMDSLKQETQGLQKEKESREKE--------LM 486
Query: 80 GYGFQITAYFLKRGIRLRCIRSTQNAELCVFPDRFVVCVSQLAFSRDLLASQNEDLTERV 139
G+ + R +EL ++ R VSQL +++ L + +E L ER
Sbjct: 487 GFSKSVN--------EARSKMDVAQSELDIYLSRHNTAVSQLTKAKEALIAASETLKERK 538
Query: 140 LHGVSDYFAECAESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIA 199
+ D E LP + + + KE+ K T+ +++ S VE + S+
Sbjct: 539 A-AIRD-----IEGKLPQTEQELKEKEKELQKLTQEETNFKSLVHDLFQKVEEAKSSLAM 592
Query: 200 EIAR 203
+R
Sbjct: 593 NRSR 596
>gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 35.4 bits (80), Expect = 0.094
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 24/184 (13%)
Query: 20 HILPQGSNKDTSWFSEQKKEEVCLLLKETIDSRVQEYLEVRKQHRPSNAEFTRSNPLSLK 79
+I+ + + ++ + E++KEE LKE +DS QE ++K+ E L
Sbjct: 437 NIINETTTRNNALEKEKEKEEK--KLKEVMDSLKQETQGLQKEKESREKE--------LM 486
Query: 80 GYGFQITAYFLKRGIRLRCIRSTQNAELCVFPDRFVVCVSQLAFSRDLLASQNEDLTERV 139
G+ + R +EL ++ R VSQL +++ L + +E L ER
Sbjct: 487 GFSKSVN--------EARSKMDVAQSELDIYLSRHNTAVSQLTKAKEALIAASETLKERK 538
Query: 140 LHGVSDYFAECAESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIA 199
+ D E LP + + + KE+ K T+ +++ S VE + S+
Sbjct: 539 A-AIRD-----IEGKLPQTEQELKEKEKELQKLTQEETNFKSLVHDLFQKVEEAKSSLAM 592
Query: 200 EIAR 203
+R
Sbjct: 593 NRSR 596
>gi|27886520 nuclear factor of activated T-cells 5 isoform a [Homo
sapiens]
Length = 1455
Score = 35.0 bits (79), Expect = 0.12
Identities = 46/233 (19%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 183 SQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEK 242
SQ+ + ++T++ + A A + S+ SE QA +A SH P+ E+
Sbjct: 1067 SQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQ--QAAFQQQAPISHIQTPMLSQEQ 1124
Query: 243 VNQTQ-----PEDTSGQQKPHPGERLKTGLL--SRSPVCSCESASPCPKQSPRVAKTQQK 295
Q P+ G P+P + + G + S+ + + +S SP +Q + + QQ+
Sbjct: 1125 AQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQ 1184
Query: 296 RRNCSSAEDFDHHGRV-SLGSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTT 354
++ + F + + ++ S + P +I ++ + E + + +Q
Sbjct: 1185 QQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQ--NPMANQEQQNQSIFHQQSNMAPM 1242
Query: 355 SKEELHVLESLSSRHLMKNNPGQAQ----QTGLATNTERLSTIQNSPTKKRKK 403
++E+ + S NPG Q QT L ++ ++ +Q SP+ + ++
Sbjct: 1243 NQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQ 1295
>gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo
sapiens]
Length = 1531
Score = 35.0 bits (79), Expect = 0.12
Identities = 46/233 (19%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 183 SQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEK 242
SQ+ + ++T++ + A A + S+ SE QA +A SH P+ E+
Sbjct: 1143 SQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQ--QAAFQQQAPISHIQTPMLSQEQ 1200
Query: 243 VNQTQ-----PEDTSGQQKPHPGERLKTGLL--SRSPVCSCESASPCPKQSPRVAKTQQK 295
Q P+ G P+P + + G + S+ + + +S SP +Q + + QQ+
Sbjct: 1201 AQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQ 1260
Query: 296 RRNCSSAEDFDHHGRV-SLGSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTT 354
++ + F + + ++ S + P +I ++ + E + + +Q
Sbjct: 1261 QQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQ--NPMANQEQQNQSIFHQQSNMAPM 1318
Query: 355 SKEELHVLESLSSRHLMKNNPGQAQ----QTGLATNTERLSTIQNSPTKKRKK 403
++E+ + S NPG Q QT L ++ ++ +Q SP+ + ++
Sbjct: 1319 NQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQ 1371
>gi|164419746 nuclear factor of activated T-cells 5 isoform d [Homo
sapiens]
Length = 1548
Score = 35.0 bits (79), Expect = 0.12
Identities = 46/233 (19%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 183 SQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEK 242
SQ+ + ++T++ + A A + S+ SE QA +A SH P+ E+
Sbjct: 1160 SQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQ--QAAFQQQAPISHIQTPMLSQEQ 1217
Query: 243 VNQTQ-----PEDTSGQQKPHPGERLKTGLL--SRSPVCSCESASPCPKQSPRVAKTQQK 295
Q P+ G P+P + + G + S+ + + +S SP +Q + + QQ+
Sbjct: 1218 AQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQ 1277
Query: 296 RRNCSSAEDFDHHGRV-SLGSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTT 354
++ + F + + ++ S + P +I ++ + E + + +Q
Sbjct: 1278 QQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQ--NPMANQEQQNQSIFHQQSNMAPM 1335
Query: 355 SKEELHVLESLSSRHLMKNNPGQAQ----QTGLATNTERLSTIQNSPTKKRKK 403
++E+ + S NPG Q QT L ++ ++ +Q SP+ + ++
Sbjct: 1336 NQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQ 1388
>gi|164419744 nuclear factor of activated T-cells 5 isoform b [Homo
sapiens]
Length = 1549
Score = 35.0 bits (79), Expect = 0.12
Identities = 46/233 (19%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 183 SQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEK 242
SQ+ + ++T++ + A A + S+ SE QA +A SH P+ E+
Sbjct: 1161 SQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQ--QAAFQQQAPISHIQTPMLSQEQ 1218
Query: 243 VNQTQ-----PEDTSGQQKPHPGERLKTGLL--SRSPVCSCESASPCPKQSPRVAKTQQK 295
Q P+ G P+P + + G + S+ + + +S SP +Q + + QQ+
Sbjct: 1219 AQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQ 1278
Query: 296 RRNCSSAEDFDHHGRV-SLGSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTT 354
++ + F + + ++ S + P +I ++ + E + + +Q
Sbjct: 1279 QQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQ--NPMANQEQQNQSIFHQQSNMAPM 1336
Query: 355 SKEELHVLESLSSRHLMKNNPGQAQ----QTGLATNTERLSTIQNSPTKKRKK 403
++E+ + S NPG Q QT L ++ ++ +Q SP+ + ++
Sbjct: 1337 NQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQ 1389
>gi|27886524 nuclear factor of activated T-cells 5 isoform a [Homo
sapiens]
Length = 1455
Score = 35.0 bits (79), Expect = 0.12
Identities = 46/233 (19%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 183 SQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEK 242
SQ+ + ++T++ + A A + S+ SE QA +A SH P+ E+
Sbjct: 1067 SQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQ--QAAFQQQAPISHIQTPMLSQEQ 1124
Query: 243 VNQTQ-----PEDTSGQQKPHPGERLKTGLL--SRSPVCSCESASPCPKQSPRVAKTQQK 295
Q P+ G P+P + + G + S+ + + +S SP +Q + + QQ+
Sbjct: 1125 AQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQ 1184
Query: 296 RRNCSSAEDFDHHGRV-SLGSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTT 354
++ + F + + ++ S + P +I ++ + E + + +Q
Sbjct: 1185 QQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQ--NPMANQEQQNQSIFHQQSNMAPM 1242
Query: 355 SKEELHVLESLSSRHLMKNNPGQAQ----QTGLATNTERLSTIQNSPTKKRKK 403
++E+ + S NPG Q QT L ++ ++ +Q SP+ + ++
Sbjct: 1243 NQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQ 1295
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 34.3 bits (77), Expect = 0.21
Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 3/165 (1%)
Query: 153 SSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASS 212
SSL P R T ++++V+S S T T SS V+ + N +
Sbjct: 2198 SSLSPQRSKLRIMSPMRTGNTYSRNNVSSVSTTGTATDLESSAKVVDHVLGPLNSSTSLG 2257
Query: 213 SPPSESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRSP 272
S S + + + L ++ Q+ D + GE+ K L S+S
Sbjct: 2258 QNTSTSSNLQRTVVTVGNKNSHLDGSSSSEMKQSSASDLVSKSSSLKGEKTKV-LSSKSS 2316
Query: 273 VCSCESAS--PCPKQSPRVAKTQQKRRNCSSAEDFDHHGRVSLGS 315
S + + PK +P+V T + N S F VS S
Sbjct: 2317 EGSAHNVAYPGIPKLAPQVHNTTSRELNVSKIGSFAEPSSVSFSS 2361
>gi|87196343 PDZ domain containing 2 [Homo sapiens]
Length = 2839
Score = 33.9 bits (76), Expect = 0.27
Identities = 50/207 (24%), Positives = 77/207 (37%), Gaps = 36/207 (17%)
Query: 195 DSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQ 254
DS ++ D + SSS P ES+ +A + +A W P ++ +++ P ++ +
Sbjct: 1542 DSTEPSLSSMYGDAEDSSSDP-ESLTEAPRA--SARDGWSPPRSRVS-LHKEDPSESEEE 1597
Query: 255 QKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSAEDFDHHGRVSLG 314
Q +CS P P SP TQ S+ L
Sbjct: 1598 Q---------------IEICSTRGC-PNPPSSPAHLPTQAAICPASAKV---------LS 1632
Query: 315 SDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTTSKE-ELHVLESLSSRHLMKN 373
PRE + + LP S S P L + +S+E E H S S H
Sbjct: 1633 LKYSTPRESVASPREKAACLPGSYTSGPDSSQPSSLLEMSSQEHETHADISTSQNH---- 1688
Query: 374 NPGQAQQTGLATNTERLSTIQNSPTKK 400
P A++T T+ S ++NSP K
Sbjct: 1689 RPSCAEETTEVTSAS--SAMENSPLSK 1713
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 33.5 bits (75), Expect = 0.36
Identities = 56/256 (21%), Positives = 92/256 (35%), Gaps = 25/256 (9%)
Query: 145 DYFAECAE---SSLPPSAKLRR--NALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIA 199
DY + CAE + PPS+K + + +K T +S + + +E S+ +
Sbjct: 58 DYESFCAEVHNPTSPPSSKKAPPPSGASQTIKSTTKRSPKPPNKKKTKKVIE--SEEITE 115
Query: 200 EIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHP 259
E + N +SSS S S + + S +QK KV + T + P P
Sbjct: 116 EHSVSENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKP 175
Query: 260 ------GERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSAEDFDHHGRVSL 313
G L G + + + SP++ + S + D SL
Sbjct: 176 PVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSL 235
Query: 314 GSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTTSKEELHVLESLSSRHLMKN 373
V +E VE + + S G KTTS +E +E S++ L
Sbjct: 236 ----TVNKETTVETKETTTT--NKQTSTDG------KEKTTSAKETQSIEKTSAKDLAPT 283
Query: 374 NPGQAQQTGLATNTER 389
+ A+ T A T +
Sbjct: 284 SKVLAKPTPKAETTTK 299
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 33.5 bits (75), Expect = 0.36
Identities = 56/256 (21%), Positives = 92/256 (35%), Gaps = 25/256 (9%)
Query: 145 DYFAECAE---SSLPPSAKLRR--NALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIA 199
DY + CAE + PPS+K + + +K T +S + + +E S+ +
Sbjct: 99 DYESFCAEVHNPTSPPSSKKAPPPSGASQTIKSTTKRSPKPPNKKKTKKVIE--SEEITE 156
Query: 200 EIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHP 259
E + N +SSS S S + + S +QK KV + T + P P
Sbjct: 157 EHSVSENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKP 216
Query: 260 ------GERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSAEDFDHHGRVSL 313
G L G + + + SP++ + S + D SL
Sbjct: 217 PVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSL 276
Query: 314 GSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTTSKEELHVLESLSSRHLMKN 373
V +E VE + + S G KTTS +E +E S++ L
Sbjct: 277 ----TVNKETTVETKETTTT--NKQTSTDG------KEKTTSAKETQSIEKTSAKDLAPT 324
Query: 374 NPGQAQQTGLATNTER 389
+ A+ T A T +
Sbjct: 325 SKVLAKPTPKAETTTK 340
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 33.5 bits (75), Expect = 0.36
Identities = 41/175 (23%), Positives = 65/175 (37%), Gaps = 24/175 (13%)
Query: 157 PSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASSSPPS 216
PSAK R R+ + SS + + R++ SS S R ++ +SSS S
Sbjct: 1395 PSAKQRSMRCYRKACRSASPSSQGWQGRRGRNSRSVSSGS------NRTSEASSSSSSSS 1448
Query: 217 ESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRSPVCSC 276
S S+ W + +SG+ + + S S S
Sbjct: 1449 SSSRSRSRSLSPPHKRW-----------RRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSS 1497
Query: 277 ESASPCPKQSPRVAKTQQKRRNCSSAEDFDHHGRVSLGSDRLVPREIIVEKSKAV 331
S S SPR + +RR SS DH+ R R++ +E +E+ + V
Sbjct: 1498 SSRSRSRSPSPR--RRSDRRRRYSSYRSHDHYQR-----QRVLQKERAIEERRVV 1545
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 33.5 bits (75), Expect = 0.36
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Query: 151 AESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQA 210
A S LPP+A LR A K V + T+++ ++ S T ++++ + + + G +
Sbjct: 1282 ATSGLPPTATLRSTATKPTVTQATTRATASTASPATTSTAQSTTRTTMT-LPTPATSGTS 1340
Query: 211 SSSPPSESMGQAKDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHPGE 261
+ P +S Q A ++ P P T+G P PG+
Sbjct: 1341 PTLP--KSTNQELPGTTATQTTGPRPT----------PASTTGPTTPQPGQ 1379
>gi|4507397 transcription factor 2 [Homo sapiens]
Length = 557
Score = 33.1 bits (74), Expect = 0.47
Identities = 61/264 (23%), Positives = 97/264 (36%), Gaps = 35/264 (13%)
Query: 141 HGVSDYFAECAESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAE 200
HG C+E P + K+RRN K + ++ R+ + E
Sbjct: 214 HGPGQSDDACSE---PTNKKMRRNRFKW----GPASQQILYQAYDRQKNPSKEEREALVE 266
Query: 201 IARRRNDGQASSSPPSESMGQAKDSIKAAESH-WGLPVQKLEKVNQTQPEDTSGQQKPHP 259
R Q SP S++ G + + + W +K E Q D + H
Sbjct: 267 ECNRAECLQRGVSP-SKAHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSSNQTHS 325
Query: 260 GERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSAEDFDHHGRVSLGSDRLV 319
LLS S+SP P + V +QQ +S+ HHG ++
Sbjct: 326 ----LNPLLSHGSPHHQPSSSP-PNKLSGVRYSQQGNNEITSSSTISHHGNSAM------ 374
Query: 320 PREIIVEKSKAVRVLPASELSDPG--LLLKQDLAKTTSKEELHVLESLSSRH-LMKNNPG 376
+ +S +V PAS DPG LL + S L + +L++ H L +NP
Sbjct: 375 ----VTSQSVLQQVSPAS--LDPGHNLLSPDGKMISVSGGGLPPVSTLTNIHSLSHHNPQ 428
Query: 377 QAQQ------TGLATNTERLSTIQ 394
Q+Q +G+ + L+T Q
Sbjct: 429 QSQNLIMTPLSGVMAIAQSLNTSQ 452
>gi|148612890 serine-arginine repressor protein [Homo sapiens]
Length = 261
Score = 33.1 bits (74), Expect = 0.47
Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 12/158 (7%)
Query: 156 PPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASSSPP 215
P S R + +RT ++SS +++ R D+++ S R R + S
Sbjct: 103 PCSPSDHRRSRSPSQRRTRSRSSSWGRNRRRSDSLKES---------RHRRFSYSQSKSR 153
Query: 216 SESMGQAKDSIKAAES---HWGLPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRSP 272
S+S+ + S + + + ++G + K Q + + Q P ++ +G SRS
Sbjct: 154 SKSLPRRSTSARQSRTPRRNFGSRGRSRSKSLQKRSKSIGKSQSSSPQKQTSSGTKSRSH 213
Query: 273 VCSCESASPCPKQSPRVAKTQQKRRNCSSAEDFDHHGR 310
+S + P +SP+ + + + F H R
Sbjct: 214 GRHSDSIARSPCKSPKGYTNSETKVQTAKHSHFRSHSR 251
>gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo
sapiens]
Length = 1283
Score = 33.1 bits (74), Expect = 0.47
Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 18/153 (11%)
Query: 152 ESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQAS 211
E+ P +++ + A KE K +SS+ S ++D + S + R +G
Sbjct: 410 ENMAPANSEATKEA-KESKKPESRRSSLLSLMTGKKDVAKGSEGENPLTVPGREKEGMLM 468
Query: 212 SSPPSE-SMGQAKDSIKAAE-------SHWGLPVQKLEKVNQTQPE---DTSGQQKP--- 257
P E + G A+D ++ +E S G + E V T+PE ++ + +P
Sbjct: 469 GVKPGEDASGPAEDLVRRSEKDTAAVVSRQGSSLNLFEDVQITEPEAEPESKSEPRPPIS 528
Query: 258 ---HPGERLKTGLLSRSPVCSCESASPCPKQSP 287
P R L SP + P P SP
Sbjct: 529 SPRAPQTRAVKPRLEVSPEAQPTARLPSPTDSP 561
>gi|225543215 antigen identified by monoclonal antibody Ki-67 isoform
2 [Homo sapiens]
Length = 2896
Score = 32.7 bits (73), Expect = 0.61
Identities = 62/285 (21%), Positives = 101/285 (35%), Gaps = 45/285 (15%)
Query: 147 FAECAESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAE--IARR 204
F E ++ P + +I ++ SV + + T++ + + + E +A R
Sbjct: 745 FKELFQTPGPSEESMTDEKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALR 804
Query: 205 RNDGQASSS--PPSESMGQAKDSIKAAESHWGLPVQKLE---------------KVNQTQ 247
+ A + P + G KD IKA G PVQKL+ K
Sbjct: 805 KLTPSAGKAMLTPKPAGGDEKD-IKA---FMGTPVQKLDLAGTLPGSKRQLQTPKEKAQA 860
Query: 248 PEDTSG-----QQKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSA 302
ED +G Q H E + G ++ P C+S P +P K + KR S
Sbjct: 861 LEDLAGFKELFQTPGHTEELVAAGKTTKIP---CDSPQSDPVDTPTSTKQRPKR----SI 913
Query: 303 EDFDHHGRV--------SLGSDRLVPREIIVEKSKAVRVL--PASELSDPGLLLKQDLAK 352
D G + S G P+ + E+ + + P +L L
Sbjct: 914 RKADVEGELLACRNLMPSAGKAMHTPKPSVGEEKDIIIFVGTPVQKLDLTENLTGSKRRP 973
Query: 353 TTSKEELHVLESLSSRHLMKNNPGQAQQTGLATNTERLSTIQNSP 397
T KEE LE L+ + PG ++ A T ++ + P
Sbjct: 974 QTPKEEAQALEDLTGFKELFQTPGHTEEAVAAGKTTKMPCESSPP 1018
Score = 32.7 bits (73), Expect = 0.61
Identities = 55/234 (23%), Positives = 80/234 (34%), Gaps = 28/234 (11%)
Query: 171 KRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASSS---PPSESMG------Q 221
K +S T S RR ++ E++ + Q + + P E G
Sbjct: 1744 KSPPPESMDTPTSTRRRPKTPLGKRDIVEELSALKQLTQTTHTDKVPGDEDKGINVFRET 1803
Query: 222 AKDSIKAAESHWGLPVQKLEKVNQTQP-EDTSGQQKPHPGERLKTGLLSRSPVC------ 274
AK + A S G Q + QP ED +G + E +T + + P
Sbjct: 1804 AKQKLDPAASVTGSKRQPRTPKGKAQPLEDLAGLK-----ELFQTPICTDKPTTHEKTTK 1858
Query: 275 -SCESASPCPKQSPRVAKTQQKR--RNCSSAEDF----DHHGRVSLGSDRLVPREIIVEK 327
+C S P P +P + K Q KR R E+ V D P +
Sbjct: 1859 IACRSPQPDPVGTPTIFKPQSKRSLRKADVEEESLALRKRTPSVGKAMDTPKPAGGDEKD 1918
Query: 328 SKAVRVLPASELSDPGLLLKQDLAKTTSKEELHVLESLSSRHLMKNNPGQAQQT 381
KA P +L PG L T KE+ LE L+ + PG + T
Sbjct: 1919 MKAFMGTPVQKLDLPGNLPGSKRWPQTPKEKAQALEDLAGFKELFQTPGTDKPT 1972
Score = 31.2 bits (69), Expect = 1.8
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 14/164 (8%)
Query: 255 QKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKR--RNCSSAEDFDHHGRV- 311
Q P P E T ++ +C+S P +P K KR R E+F ++
Sbjct: 750 QTPGPSEESMTD--EKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALRKLT 807
Query: 312 -SLGSDRLVPREIIVEKS--KAVRVLPASELSDPGLLLKQDLAKTTSKEELHVLESLSSR 368
S G L P+ ++ KA P +L G L T KE+ LE L+
Sbjct: 808 PSAGKAMLTPKPAGGDEKDIKAFMGTPVQKLDLAGTLPGSKRQLQTPKEKAQALEDLAGF 867
Query: 369 HLMKNNPGQAQQTGLATNTERL------STIQNSPTKKRKKYER 406
+ PG ++ A T ++ S ++PT +++ +R
Sbjct: 868 KELFQTPGHTEELVAAGKTTKIPCDSPQSDPVDTPTSTKQRPKR 911
Score = 31.2 bits (69), Expect = 1.8
Identities = 60/269 (22%), Positives = 100/269 (37%), Gaps = 33/269 (12%)
Query: 156 PPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASSSPP 215
P S+K R V E +V +QT +T T ++ DG++ +
Sbjct: 1266 PASSKRRLKTSLGKVGVKEELLAVGKLTQTSGETTHTHTEPT--------GDGKSMKA-- 1315
Query: 216 SESMGQAKDSIKAAESHWGLPVQ-KLEKVNQTQPEDTSG-----QQKPHPGERLKTGLLS 269
M K + +A S G Q + K PED +G Q H E +
Sbjct: 1316 --FMESPKQILDSAASLTGSKRQLRTPKGKSEVPEDLAGFIELFQTPSHTKESMTN---E 1370
Query: 270 RSPVCSCESASPCPKQSPRVAKTQQKR--RNCSSAEDFDHHGRV--SLGSDRLVPREIIV 325
++ S ++ P +P +K Q KR R + E+F + S G P+ +
Sbjct: 1371 KTTKVSYRASQPDLVDTPTSSKPQPKRSLRKADTEEEFLAFRKQTPSAGKAMHTPKPAVG 1430
Query: 326 EKSKAVRVL--PASELSDPGLLLKQDLAKTTSKEELHVLESLSSRHLMKNNPGQAQQTGL 383
E+ L P +L PG L + T KE+ LE L+ + P T
Sbjct: 1431 EEKDINTFLGTPVQKLDQPGNLPGSNRRLQTRKEKAQALEELTGFRELFQTPCTDNPTTD 1490
Query: 384 ATNTERL------STIQNSPTKKRKKYER 406
T+++ S ++PT +++ +R
Sbjct: 1491 EKTTKKILCKSPQSDPADTPTNTKQRPKR 1519
>gi|103472005 antigen identified by monoclonal antibody Ki-67 isoform
1 [Homo sapiens]
Length = 3256
Score = 32.7 bits (73), Expect = 0.61
Identities = 62/285 (21%), Positives = 101/285 (35%), Gaps = 45/285 (15%)
Query: 147 FAECAESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAE--IARR 204
F E ++ P + +I ++ SV + + T++ + + + E +A R
Sbjct: 1105 FKELFQTPGPSEESMTDEKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALR 1164
Query: 205 RNDGQASSS--PPSESMGQAKDSIKAAESHWGLPVQKLE---------------KVNQTQ 247
+ A + P + G KD IKA G PVQKL+ K
Sbjct: 1165 KLTPSAGKAMLTPKPAGGDEKD-IKA---FMGTPVQKLDLAGTLPGSKRQLQTPKEKAQA 1220
Query: 248 PEDTSG-----QQKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSA 302
ED +G Q H E + G ++ P C+S P +P K + KR S
Sbjct: 1221 LEDLAGFKELFQTPGHTEELVAAGKTTKIP---CDSPQSDPVDTPTSTKQRPKR----SI 1273
Query: 303 EDFDHHGRV--------SLGSDRLVPREIIVEKSKAVRVL--PASELSDPGLLLKQDLAK 352
D G + S G P+ + E+ + + P +L L
Sbjct: 1274 RKADVEGELLACRNLMPSAGKAMHTPKPSVGEEKDIIIFVGTPVQKLDLTENLTGSKRRP 1333
Query: 353 TTSKEELHVLESLSSRHLMKNNPGQAQQTGLATNTERLSTIQNSP 397
T KEE LE L+ + PG ++ A T ++ + P
Sbjct: 1334 QTPKEEAQALEDLTGFKELFQTPGHTEEAVAAGKTTKMPCESSPP 1378
Score = 32.7 bits (73), Expect = 0.61
Identities = 55/234 (23%), Positives = 80/234 (34%), Gaps = 28/234 (11%)
Query: 171 KRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASSS---PPSESMG------Q 221
K +S T S RR ++ E++ + Q + + P E G
Sbjct: 2104 KSPPPESMDTPTSTRRRPKTPLGKRDIVEELSALKQLTQTTHTDKVPGDEDKGINVFRET 2163
Query: 222 AKDSIKAAESHWGLPVQKLEKVNQTQP-EDTSGQQKPHPGERLKTGLLSRSPVC------ 274
AK + A S G Q + QP ED +G + E +T + + P
Sbjct: 2164 AKQKLDPAASVTGSKRQPRTPKGKAQPLEDLAGLK-----ELFQTPICTDKPTTHEKTTK 2218
Query: 275 -SCESASPCPKQSPRVAKTQQKR--RNCSSAEDF----DHHGRVSLGSDRLVPREIIVEK 327
+C S P P +P + K Q KR R E+ V D P +
Sbjct: 2219 IACRSPQPDPVGTPTIFKPQSKRSLRKADVEEESLALRKRTPSVGKAMDTPKPAGGDEKD 2278
Query: 328 SKAVRVLPASELSDPGLLLKQDLAKTTSKEELHVLESLSSRHLMKNNPGQAQQT 381
KA P +L PG L T KE+ LE L+ + PG + T
Sbjct: 2279 MKAFMGTPVQKLDLPGNLPGSKRWPQTPKEKAQALEDLAGFKELFQTPGTDKPT 2332
Score = 31.2 bits (69), Expect = 1.8
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 14/164 (8%)
Query: 255 QKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKR--RNCSSAEDFDHHGRV- 311
Q P P E T ++ +C+S P +P K KR R E+F ++
Sbjct: 1110 QTPGPSEESMTD--EKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALRKLT 1167
Query: 312 -SLGSDRLVPREIIVEKS--KAVRVLPASELSDPGLLLKQDLAKTTSKEELHVLESLSSR 368
S G L P+ ++ KA P +L G L T KE+ LE L+
Sbjct: 1168 PSAGKAMLTPKPAGGDEKDIKAFMGTPVQKLDLAGTLPGSKRQLQTPKEKAQALEDLAGF 1227
Query: 369 HLMKNNPGQAQQTGLATNTERL------STIQNSPTKKRKKYER 406
+ PG ++ A T ++ S ++PT +++ +R
Sbjct: 1228 KELFQTPGHTEELVAAGKTTKIPCDSPQSDPVDTPTSTKQRPKR 1271
Score = 31.2 bits (69), Expect = 1.8
Identities = 60/269 (22%), Positives = 100/269 (37%), Gaps = 33/269 (12%)
Query: 156 PPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASSSPP 215
P S+K R V E +V +QT +T T ++ DG++ +
Sbjct: 1626 PASSKRRLKTSLGKVGVKEELLAVGKLTQTSGETTHTHTEPT--------GDGKSMKA-- 1675
Query: 216 SESMGQAKDSIKAAESHWGLPVQ-KLEKVNQTQPEDTSG-----QQKPHPGERLKTGLLS 269
M K + +A S G Q + K PED +G Q H E +
Sbjct: 1676 --FMESPKQILDSAASLTGSKRQLRTPKGKSEVPEDLAGFIELFQTPSHTKESMTN---E 1730
Query: 270 RSPVCSCESASPCPKQSPRVAKTQQKR--RNCSSAEDFDHHGRV--SLGSDRLVPREIIV 325
++ S ++ P +P +K Q KR R + E+F + S G P+ +
Sbjct: 1731 KTTKVSYRASQPDLVDTPTSSKPQPKRSLRKADTEEEFLAFRKQTPSAGKAMHTPKPAVG 1790
Query: 326 EKSKAVRVL--PASELSDPGLLLKQDLAKTTSKEELHVLESLSSRHLMKNNPGQAQQTGL 383
E+ L P +L PG L + T KE+ LE L+ + P T
Sbjct: 1791 EEKDINTFLGTPVQKLDQPGNLPGSNRRLQTRKEKAQALEELTGFRELFQTPCTDNPTTD 1850
Query: 384 ATNTERL------STIQNSPTKKRKKYER 406
T+++ S ++PT +++ +R
Sbjct: 1851 EKTTKKILCKSPQSDPADTPTNTKQRPKR 1879
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 32.7 bits (73), Expect = 0.61
Identities = 50/244 (20%), Positives = 90/244 (36%), Gaps = 20/244 (8%)
Query: 176 KSSVTSKSQTRRDTVETSSDSVIAEIARR-RNDGQASSSPPSESMGQAKDSIKAAESHWG 234
K V S T + + D + +A+R R+D + P S+ + ++ W
Sbjct: 46 KGRVVIDSDTEDSGSDENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSDSDDEWT 105
Query: 235 LPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQ 294
K +K + + + G K + +G S S ES++P + V+ +
Sbjct: 106 FGSNKNKKKGKARKIEKKGTMKKQANKTASSG--SSDKDSSAESSAP---EEGEVSDSDS 160
Query: 295 KRRNCSSAED--------FDHHGRVSLGSDRLVPR-EIIVEKSKAVRV---LPASELSDP 342
+ SS D D +G +G + R E + EK + + + E+
Sbjct: 161 NSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKR 220
Query: 343 GLLLKQDLAKTTSKEELHVLESLSSRHLMKNNPGQAQQTGLAT-NTERLSTIQNSPTKKR 401
+K+ L KT K+E + K Q Q++ + + N ER S KK
Sbjct: 221 RFEIKKKL-KTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKS 279
Query: 402 KKYE 405
+ E
Sbjct: 280 QAME 283
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 32.3 bits (72), Expect = 0.79
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 6/117 (5%)
Query: 148 AECAESSLPPSAKLRRNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRND 207
+E +S L + KE +K ET S + V + I ++ + +ND
Sbjct: 744 SEAKDSRLQDQRQNSPAGNKENIKPNETSPSFSKAENKGISPVVSEHRKQIDDLKKFKND 803
Query: 208 GQASSSPPSESMGQAKDSIKAAESHWGLPVQKLEK------VNQTQPEDTSGQQKPH 258
+ S SESM Q + + E L K+E + + TSG KP+
Sbjct: 804 FRLQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPSAKDSFIENSSSNCTSGSSKPN 860
>gi|24497531 Ellis van Creveld syndrome protein [Homo sapiens]
Length = 992
Score = 32.3 bits (72), Expect = 0.79
Identities = 40/162 (24%), Positives = 60/162 (37%), Gaps = 31/162 (19%)
Query: 163 RNALKEIVKRTETKSSVTSKSQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQA 222
+N LK + +T S S S+ R+ V+ S D + PPS S A
Sbjct: 63 QNLLKNLESNAQTPSETGSPSRRRKREVQMSKDKEAVD----------ECEPPSNSNITA 112
Query: 223 KDSIKAAESHWGLPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRSPVCSCESASPC 282
+ L + + +NQ G P E LK +L PV ASP
Sbjct: 113 ----------FALKAKVIYPINQKFRPLADGSSNPSLHENLKQAVLPHQPV----EASP- 157
Query: 283 PKQSPRVAKTQQKRRNCSSAEDFDHHGRVSLGSDRLVPREII 324
S + +Q ++ +CSS+ H S DR + R +
Sbjct: 158 --SSSLGSLSQGEKDDCSSSSSV--HSATS--DDRFLSRTFL 193
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 32.0 bits (71), Expect = 1.0
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 176 KSSVTSKSQTRRDT----VETSSDSVIAEIARRRNDGQASSSPPSESMGQ----AKDSIK 227
++ +T+ + RR++ +S I A R G++ P+ S G+ + + +
Sbjct: 805 RARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAAR 864
Query: 228 AAESHWGLPVQKLEKVNQTQPEDTSGQQKPHPGERLKTGLLSRSPVCSCESASPCPKQSP 287
+A WGL + + P + P P RL ++ S +S PK P
Sbjct: 865 SARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYSPKVPP 924
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.126 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,409,487
Number of Sequences: 37866
Number of extensions: 688091
Number of successful extensions: 2344
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 2296
Number of HSP's gapped (non-prelim): 150
length of query: 408
length of database: 18,247,518
effective HSP length: 105
effective length of query: 303
effective length of database: 14,271,588
effective search space: 4324291164
effective search space used: 4324291164
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.