MTDH 14622

Name: MTDH	Sequence: fasta or formatted (582aa)		NCBI GI: 223555917
Description: metadherin		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 41 3 C cysteine 0.2 1 1 D aspartate 6.2 36 3 E glutamate 8.4 49 2 F phenylalanine 1.0 6 1 G glycine 6.9 40 3 H histidine 0.5 3 1 I isoleucine 2.9 17 1 K lysine 12.4 72 9 L leucine 7.2 42 4 M methionine 0.3 2 1 N asparagine 4.6 27 1 P proline 5.8 34 2 Q glutamine 4.8 28 2 R arginine 4.8 28 2 S serine 12.2 71 3 T threonine 6.4 37 2 V valine 5.0 29 1 W tryptophan 2.6 15 1 Y tyrosine 0.7 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 metadherin DSPP 0.028 dentin sialophosphoprotein preproprotein NEFH 0.027 neurofilament, heavy polypeptide 200kDa CALD1 0.026 caldesmon 1 isoform 1 CALD1 0.026 caldesmon 1 isoform 2 CALD1 0.024 caldesmon 1 isoform 5 AFF4 0.024 ALL1 fused gene from 5q31 CYLC1 0.022 cylicin, basic protein of sperm head cytoskeleton 1... ATRX 0.019 transcriptional regulator ATRX isoform 2 ATRX 0.019 transcriptional regulator ATRX isoform 1 GTF2F1 0.019 general transcription factor IIF, polypeptide 1, 74... TRDN 0.019 triadin RPGR 0.019 retinitis pigmentosa GTPase regulator isoform A [Homo... EIF5B 0.019 eukaryotic translation initiation factor 5B CWF19L2 0.019 CWF19-like 2, cell cycle control AP3B2 0.018 adaptor-related protein complex 3, beta 2 subunit [H... RTF1 0.018 Paf1/RNA polymerase II complex component ACRC 0.018 ACRC protein CD3EAP 0.018 CD3E antigen, epsilon polypeptide associated protein ... BOD1L 0.018 biorientation of chromosomes in cell division 1-like... LMO7 0.017 LIM domain only 7 isoform 1 LOC100133599 0.017 PREDICTED: hypothetical protein LMO7 0.017 LIM domain only 7 isoform 2 CTR9 0.017 SH2 domain binding protein 1 DDX21 0.017 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 LOC100133599 0.017 PREDICTED: hypothetical protein NKTR 0.017 natural killer-tumor recognition sequence MDN1 0.017 MDN1, midasin homolog SRRM2 0.017 splicing coactivator subunit SRm300 MED1 0.016 mediator complex subunit 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.