HNF1B 29549

Name: HNF1B	Sequence: fasta or formatted (557aa)		NCBI GI: 4507397
Description: transcription factor 2		Referenced in: Homeobox and Related Proteins Liver
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 36 2 C cysteine 0.7 4 1 D aspartate 3.2 18 2 E glutamate 5.2 29 2 F phenylalanine 2.2 12 1 G glycine 5.6 31 3 H histidine 4.1 23 2 I isoleucine 2.3 13 1 K lysine 4.5 25 2 L leucine 9.7 54 2 M methionine 3.2 18 1 N asparagine 5.2 29 2 P proline 7.0 39 2 Q glutamine 9.9 55 2 R arginine 3.9 22 2 S serine 12.9 72 3 T threonine 5.4 30 1 V valine 5.6 31 2 W tryptophan 0.9 5 1 Y tyrosine 2.0 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 2 HNF1A 0.477 hepatic nuclear factor-1-alpha HMBOX1 0.044 homeobox containing 1 HMBOX1 0.044 homeobox containing 1 PAX7 0.020 paired box 7 isoform 1 PAX7 0.020 paired box 7 isoform 2 PAX7 0.020 paired box 7 isoform 3 PAX3 0.017 paired box 3 isoform PAX3i PAX3 0.017 paired box 3 isoform PAX3e PAX3 0.017 paired box 3 isoform PAX3d PAX3 0.017 paired box 3 isoform PAX3 CKAP4 0.015 cytoskeleton-associated protein 4 POU6F2 0.015 POU domain, class 6, transcription factor 2 ATXN2 0.014 ataxin 2 CHD9 0.013 chromodomain helicase DNA binding protein 9 MUC4 0.013 mucin 4 isoform a PAX3 0.012 paired box 3 isoform PAX3g PAX3 0.012 paired box 3 isoform PAX3h TANC2 0.012 tetratricopeptide repeat, ankyrin repeat and coiled... FOXC1 0.011 forkhead box C1 SIX2 0.011 SIX homeobox 2 PRRX1 0.011 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.011 paired mesoderm homeobox 1 isoform pmx-1b MAGEC1 0.011 melanoma antigen family C, 1 TNPO2 0.010 transportin 2 (importin 3, karyopherin beta 2b) iso... TNPO2 0.010 transportin 2 (importin 3, karyopherin beta 2b) iso... TNPO2 0.010 transportin 2 (importin 3, karyopherin beta 2b) isof... PAX6 0.010 paired box gene 6 isoform a PAX6 0.010 paired box gene 6 isoform b PAX6 0.010 paired box gene 6 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.