SMC4 31694

Name: SMC4	Sequence: fasta or formatted (1288aa)		NCBI GI: 50658065
Description: SMC4 structural maintenance of chromosomes 4-like 1		Referenced in: Spindle, M phase, and Meiosis
Other entries for this name: alt mRNA [1288aa] SMC4 structural maintenance of chromosomes 4-like 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 88 2 C cysteine 0.9 12 2 D aspartate 5.3 68 2 E glutamate 11.6 149 3 F phenylalanine 2.8 36 1 G glycine 4.0 51 3 H histidine 2.2 28 2 I isoleucine 7.5 96 3 K lysine 11.5 148 3 L leucine 8.9 114 2 M methionine 2.2 28 2 N asparagine 5.3 68 2 P proline 3.2 41 6 Q glutamine 4.9 63 2 R arginine 4.6 59 3 S serine 6.1 79 2 T threonine 4.5 58 3 V valine 5.3 68 2 W tryptophan 0.3 4 1 Y tyrosine 2.3 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC4 1.000 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC1A 0.135 structural maintenance of chromosomes 1A SMC1B 0.121 SMC1 structural maintenance of chromosomes 1-like 2 ... SMC3 0.085 structural maintenance of chromosomes 3 SMC2 0.083 structural maintenance of chromosomes 2 SMC2 0.083 structural maintenance of chromosomes 2 SMC2 0.083 structural maintenance of chromosomes 2 CCDC88A 0.037 coiled-coil domain containing 88A isoform 2 CCDC88A 0.036 coiled-coil domain containing 88A isoform 1 MYH10 0.035 myosin, heavy polypeptide 10, non-muscle MYH4 0.034 myosin, heavy polypeptide 4, skeletal muscle EEA1 0.033 early endosome antigen 1, 162kD MYH13 0.033 myosin, heavy polypeptide 13, skeletal muscle [Homo... CENPF 0.033 centromere protein F MYH3 0.032 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYH9 0.032 myosin, heavy polypeptide 9, non-muscle CENPE 0.031 centromere protein E MYH6 0.031 myosin heavy chain 6 MYH1 0.031 myosin, heavy chain 1, skeletal muscle, adult [Homo... ERC1 0.031 RAB6-interacting protein 2 isoform epsilon MYH2 0.031 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.031 myosin, heavy chain 2, skeletal muscle, adult [Homo... NUMA1 0.031 nuclear mitotic apparatus protein 1 GOLGB1 0.031 golgi autoantigen, golgin subfamily b, macrogolgin ... GOLGA4 0.030 golgi autoantigen, golgin subfamily a, 4 ERC1 0.028 RAB6-interacting protein 2 isoform delta GCC2 0.028 GRIP and coiled-coil domain-containing 2 CCDC18 0.028 sarcoma antigen NY-SAR-41 KTN1 0.027 kinectin 1 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.