Guide to the Human Genome
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Name: SRrp35 Sequence: fasta or formatted (261aa) NCBI GI: 148612890
Description:

serine-arginine repressor protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          9           1
 C cysteine            1.1          3           1
 D aspartate           4.2         11           1
 E glutamate           3.1          8           1
 F phenylalanine       3.4          9           1
 G glycine             5.0         13           1
 H histidine           3.4          9           1
 I isoleucine          2.7          7           1
 K lysine              6.9         18           1
 L leucine             3.1          8           1
 M methionine          0.8          2           1
 N asparagine          3.1          8           1
 P proline             5.7         15           2
 Q glutamine           5.0         13           1
 R arginine           18.0         47           3
 S serine             18.8         49           3
 T threonine           5.0         13           1
 V valine              2.7          7           1
 W tryptophan          1.1          3           1
 Y tyrosine            3.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine-arginine repressor protein 
FUSIP1                0.426   FUS interacting protein (serine-arginine rich) 1 iso...
FUSIP1                0.381   FUS interacting protein (serine-arginine rich) 1 isof...
LOC653884             0.373   PREDICTED: similar to FUS interacting protein (seri...
SFRS2                 0.201   splicing factor, arginine/serine-rich 2 
SFRS2B                0.189   splicing factor, arginine/serine-rich 2B 
SFRS7                 0.176   splicing factor, arginine/serine-rich 7 
SFRS3                 0.138   splicing factor, arginine/serine-rich 3 
SFRS6                 0.122   arginine/serine-rich splicing factor 6 
SFRS5                 0.118   splicing factor, arginine/serine-rich 5 
SFRS5                 0.118   splicing factor, arginine/serine-rich 5 
SFRS4                 0.112   splicing factor, arginine/serine-rich 4 
LOC100170229          0.095   hypothetical protein LOC100170229 
SRRM2                 0.091   splicing coactivator subunit SRm300 
SNRNP70               0.089   U1 small nuclear ribonucleoprotein 70 kDa 
TRA2B                 0.087   splicing factor, arginine/serine-rich 10 
SON                   0.085   SON DNA-binding protein isoform F 
SON                   0.085   SON DNA-binding protein isoform B 
SFRS11                0.083   splicing factor, arginine/serine-rich 11 
TRA2A                 0.081   transformer-2 alpha 
RBMX                  0.081   RNA binding motif protein, X-linked 
NKTR                  0.079   natural killer-tumor recognition sequence 
CROP                  0.077   cisplatin resistance-associated overexpressed protei...
CROP                  0.077   cisplatin resistance-associated overexpressed protei...
RBMXL1                0.075   RNA binding motif protein, X-linked-like 1 
RBMXL1                0.075   RNA binding motif protein, X-linked-like 1 
BCLAF1                0.075   BCL2-associated transcription factor 1 isoform 3 [H...
BCLAF1                0.075   BCL2-associated transcription factor 1 isoform 1 [Hom...
ZRANB2                0.075   zinc finger protein 265 isoform 1 
SFRS2IP               0.073   splicing factor, arginine/serine-rich 2, interactin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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