Guide to the Human Genome
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Name: NFAT5 Sequence: fasta or formatted (1455aa) NCBI GI: 27886520
Description:

nuclear factor of activated T-cells 5 isoform a

Referenced in:

T cells

Other entries for this name:
alt prot [1549aa] nuclear factor of activated T-cells 5 isoform b
alt prot [1548aa] nuclear factor of activated T-cells 5 isoform d
alt mRNA [1455aa] nuclear factor of activated T-cells 5 isoform a
alt prot [1531aa] nuclear factor of activated T-cells 5 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         77           3
 C cysteine            1.2         17           1
 D aspartate           2.7         40           1
 E glutamate           4.9         72           3
 F phenylalanine       3.3         48           2
 G glycine             5.5         80           2
 H histidine           1.9         27           1
 I isoleucine          3.9         57           2
 K lysine              3.3         48           3
 L leucine             6.5         94           2
 M methionine          3.6         53           2
 N asparagine          6.5         94           2
 P proline             7.2        105           3
 Q glutamine          14.6        212          17
 R arginine            2.0         29           2
 S serine             13.5        197           3
 T threonine           7.5        109           4
 V valine              5.6         81           2
 W tryptophan          0.1          2           1
 Y tyrosine            0.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of activated T-cells 5 isoform a [Hom... 
NFAT5                 1.000   nuclear factor of activated T-cells 5 isoform c [Homo...
NFAT5                 1.000   nuclear factor of activated T-cells 5 isoform b [Ho...
NFAT5                 1.000   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.998   nuclear factor of activated T-cells 5 isoform d [Ho...
NFATC3                0.070   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.070   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.070   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.070   nuclear factor of activated T-cells, cytoplasmic, cal...
NFATC2                0.069   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC2                0.069   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC2                0.069   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC1                0.069   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.068   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.068   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.068   nuclear factor of activated T-cells, cytosolic compo...
NFATC4                0.060   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.060   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC1                0.051   nuclear factor of activated T-cells, cytosolic compo...
MLL2                  0.024   myeloid/lymphoid or mixed-lineage leukemia 2 
MED15                 0.021   mediator complex subunit 15 isoform b 
MAML2                 0.021   mastermind-like 2 
PAXIP1                0.020   PAX interacting protein 1 
NCOA6                 0.020   nuclear receptor coactivator 6 
MED15                 0.019   mediator complex subunit 15 isoform a 
ZNF853                0.019   zinc finger protein 853 
NCOA3                 0.018   nuclear receptor coactivator 3 isoform b 
PHC1                  0.018   polyhomeotic 1-like 
ARID1A                0.018   AT rich interactive domain 1A isoform a 
ARID1A                0.018   AT rich interactive domain 1A isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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