Guide to the Human Genome
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Name: GOLGA8F Sequence: fasta or formatted (283aa) NCBI GI: 60218906
Description:

golgi autoantigen, golgin subfamily a, 8F

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         27           2
 C cysteine            2.1          6           2
 D aspartate           3.5         10           1
 E glutamate          11.7         33           2
 F phenylalanine       1.8          5           2
 G glycine             9.2         26           3
 H histidine           5.3         15           2
 I isoleucine          0.7          2           1
 K lysine              7.8         22           2
 L leucine             8.5         24           2
 M methionine          1.8          5           1
 N asparagine          1.1          3           1
 P proline             7.8         22           2
 Q glutamine           7.8         22           2
 R arginine            6.0         17           4
 S serine              4.9         14           1
 T threonine           1.8          5           1
 V valine              5.3         15           1
 W tryptophan          1.4          4           1
 Y tyrosine            2.1          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi autoantigen, golgin subfamily a, 8F 
LOC653061             0.649   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8E               0.614   golgi autoantigen, golgin subfamily a, 8E 
GOLGA8G               0.603   golgi autoantigen, golgin subfamily a, 8G 
GOLGA8A               0.487   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.485   golgi autoantigen, golgin subfamily a, 8B 
LOC100292334          0.467   PREDICTED: similar to GOLGA8B protein, partial [Hom...
LOC653061             0.427   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.425   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.423   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.423   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.422   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.409   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.407   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.407   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.407   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.407   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.407   PREDICTED: Golgin subfamily A member 8-like protein...
LOC643699             0.406   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC728047             0.406   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.406   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.404   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.402   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.402   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.400   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.390   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.390   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.289   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.287   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.287   PREDICTED: similar to hect domain and RLD 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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