WDHD1 33701

Name: WDHD1	Sequence: fasta or formatted (1129aa)		NCBI GI: 5901892
Description: WD repeat and HMG-box DNA binding protein 1 isoform 1		Referenced in: Nonhistone Chromosomal Proteins WD Repeat Proteins
Other entries for this name: alt prot [1006aa] WD repeat and HMG-box DNA binding protein 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 75 4 C cysteine 2.3 26 1 D aspartate 6.4 72 4 E glutamate 8.1 91 7 F phenylalanine 3.7 42 1 G glycine 5.9 67 2 H histidine 2.5 28 2 I isoleucine 5.3 60 2 K lysine 7.3 82 4 L leucine 8.1 91 3 M methionine 1.9 21 2 N asparagine 5.4 61 2 P proline 4.5 51 2 Q glutamine 4.3 48 2 R arginine 4.2 47 2 S serine 9.5 107 3 T threonine 5.5 62 2 V valine 5.1 58 2 W tryptophan 1.7 19 1 Y tyrosine 1.9 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat and HMG-box DNA binding protein 1 isoform 1... WDHD1 0.888 WD repeat and HMG-box DNA binding protein 1 isoform ... WDR5 0.023 WD repeat domain 5 WDR5 0.023 WD repeat domain 5 WDR5B 0.021 WD repeat domain 5B ATG16L1 0.020 APG16 autophagy 16-like isoform 1 ATG16L1 0.020 APG16 autophagy 16-like isoform 2 PRPF19 0.017 PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom... TBL1X 0.017 transducin beta-like 1X isoform b TBL1X 0.017 transducin beta-like 1X isoform b TBL1X 0.017 transducin beta-like 1X isoform a TBL1X 0.017 transducin beta-like 1X isoform a CIAO1 0.016 WD repeat domain 39 TBL1XR1 0.016 transducin (beta)-like 1 X-linked receptor 1 APAF1 0.016 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.016 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.016 apoptotic peptidase activating factor 1 isoform b [Ho... APAF1 0.016 apoptotic peptidase activating factor 1 isoform a [Ho... WDR51A 0.016 WD repeat domain 51A isoform 3 WDR51A 0.016 WD repeat domain 51A isoform 2 WDR51A 0.016 WD repeat domain 51A isoform 1 TBL1Y 0.015 transducin beta-like 1Y TBL1Y 0.015 transducin beta-like 1Y TBL1Y 0.015 transducin beta-like 1Y WDR51B 0.015 WD repeat domain 51B WDR69 0.015 WD repeat domain 69 SNRNP40 0.015 WD repeat domain 57 (U5 snRNP specific) TAF5L 0.015 PCAF associated factor 65 beta isoform a KATNB1 0.015 katanin p80 subunit B 1 TAF5 0.015 TBP-associated factor 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.