Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 58743323
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58743323 XK, Kell blood group complex subunit-related
family, member 7 [Homo sapiens]
(579 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58743323 XK, Kell blood group complex subunit-related family,... 1185 0.0
gi|59709427 XK, Kell blood group complex subunit-related family,... 538 e-153
gi|89886484 XK, Kell blood group complex subunit-related family,... 526 e-149
gi|24431977 XK, Kell blood group complex subunit-related family,... 152 8e-37
gi|118722353 XK-related protein 5a [Homo sapiens] 120 3e-27
gi|58743325 XK, Kell blood group complex subunit-related family,... 114 2e-25
gi|10835267 membrane transport protein XK [Homo sapiens] 63 6e-10
gi|237874249 XK, Kell blood group complex subunit-related, X-lin... 44 5e-04
gi|13994190 frizzled 8 [Homo sapiens] 41 0.003
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 0.008
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 39 0.013
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 39 0.013
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 39 0.013
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 39 0.013
gi|103471991 X Kell blood group precursor-related family, member... 39 0.013
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 38 0.029
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 37 0.050
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 37 0.050
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 37 0.050
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 37 0.050
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 37 0.050
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 37 0.050
gi|7706435 headcase [Homo sapiens] 37 0.050
gi|46909598 a disintegrin and metalloproteinase domain 15 isofor... 37 0.065
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 37 0.065
gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens] 37 0.065
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 36 0.085
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 36 0.085
gi|5032179 tripartite motif-containing 28 protein [Homo sapiens] 36 0.085
gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 36 0.085
>gi|58743323 XK, Kell blood group complex subunit-related family,
member 7 [Homo sapiens]
Length = 579
Score = 1185 bits (3066), Expect = 0.0
Identities = 579/579 (100%), Positives = 579/579 (100%)
Query: 1 MAAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPGPRYELRDCCWV 60
MAAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPGPRYELRDCCWV
Sbjct: 1 MAAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPGPRYELRDCCWV 60
Query: 61 LCALLVFFSDGATDLWLAASYYLQNQHTYFSLTLLFVLLPSLVVQLLSFRWFVYDYSEPA 120
LCALLVFFSDGATDLWLAASYYLQNQHTYFSLTLLFVLLPSLVVQLLSFRWFVYDYSEPA
Sbjct: 61 LCALLVFFSDGATDLWLAASYYLQNQHTYFSLTLLFVLLPSLVVQLLSFRWFVYDYSEPA 120
Query: 121 GSPGPAVSTKDSVAGGAAISTKDSAGAFRTKEGSPEPGPQPAPSSASAYRRRCCRLCIWL 180
GSPGPAVSTKDSVAGGAAISTKDSAGAFRTKEGSPEPGPQPAPSSASAYRRRCCRLCIWL
Sbjct: 121 GSPGPAVSTKDSVAGGAAISTKDSAGAFRTKEGSPEPGPQPAPSSASAYRRRCCRLCIWL 180
Query: 181 LQTLVHLLQLGQVWRYLRALYLGLQSRWRGERLRRHFYWQMLFESADVSMLRLLETFLRS 240
LQTLVHLLQLGQVWRYLRALYLGLQSRWRGERLRRHFYWQMLFESADVSMLRLLETFLRS
Sbjct: 181 LQTLVHLLQLGQVWRYLRALYLGLQSRWRGERLRRHFYWQMLFESADVSMLRLLETFLRS 240
Query: 241 APQLVLQLSLLVHRGGAPDLLPALSTSASLVSLAWTLASYQKVLRDSRDDKRPLSYKGAV 300
APQLVLQLSLLVHRGGAPDLLPALSTSASLVSLAWTLASYQKVLRDSRDDKRPLSYKGAV
Sbjct: 241 APQLVLQLSLLVHRGGAPDLLPALSTSASLVSLAWTLASYQKVLRDSRDDKRPLSYKGAV 300
Query: 301 AQVLWHLFSIAARGLAFALFASVYKLYFGIFIVAHWCVMTFWVIQGETDFCMSKWEEIIY 360
AQVLWHLFSIAARGLAFALFASVYKLYFGIFIVAHWCVMTFWVIQGETDFCMSKWEEIIY
Sbjct: 301 AQVLWHLFSIAARGLAFALFASVYKLYFGIFIVAHWCVMTFWVIQGETDFCMSKWEEIIY 360
Query: 361 NMVVGIIYIFCWFNVKEGRSRRRMTLYHCIVLLENAALTGFWYSSRNFSTDFYSLIMVCV 420
NMVVGIIYIFCWFNVKEGRSRRRMTLYHCIVLLENAALTGFWYSSRNFSTDFYSLIMVCV
Sbjct: 361 NMVVGIIYIFCWFNVKEGRSRRRMTLYHCIVLLENAALTGFWYSSRNFSTDFYSLIMVCV 420
Query: 421 VASSFALGIFFMCVYYCLLHPNGPMLGPQAPGCIFRKASEPCGPPADAITSPPRSLPRTT 480
VASSFALGIFFMCVYYCLLHPNGPMLGPQAPGCIFRKASEPCGPPADAITSPPRSLPRTT
Sbjct: 421 VASSFALGIFFMCVYYCLLHPNGPMLGPQAPGCIFRKASEPCGPPADAITSPPRSLPRTT 480
Query: 481 GAERDGASAGERAGTPTPPVFQVRPGLPPTPVARTLRTEGPVIRIDLPRKKYPAWDAHFI 540
GAERDGASAGERAGTPTPPVFQVRPGLPPTPVARTLRTEGPVIRIDLPRKKYPAWDAHFI
Sbjct: 481 GAERDGASAGERAGTPTPPVFQVRPGLPPTPVARTLRTEGPVIRIDLPRKKYPAWDAHFI 540
Query: 541 DRRLRKTILALEYSSPATPRLQYRSVGTSQELLEYETTV 579
DRRLRKTILALEYSSPATPRLQYRSVGTSQELLEYETTV
Sbjct: 541 DRRLRKTILALEYSSPATPRLQYRSVGTSQELLEYETTV 579
>gi|59709427 XK, Kell blood group complex subunit-related family,
member 4 [Homo sapiens]
Length = 650
Score = 538 bits (1386), Expect = e-153
Identities = 293/617 (47%), Positives = 377/617 (61%), Gaps = 52/617 (8%)
Query: 9 AASASPDPEGAAGGARGSAGG----------RGEAAAAAGPPGVVGAGGPGP-------- 50
+ S + D E A GG GG G +A + G GV G GG G
Sbjct: 40 SGSGAEDEEAAGGGCCPDGGGCSRCCCCCAGSGGSAGSGGSGGVAGPGGGGAGSAALCLR 99
Query: 51 ------RYELRDCCWVLCALLVFFSDGATDLWLAASYYLQNQHTYFSLTLLFVLLPSLVV 104
RY L DC W+L A+ V+F+D TD+WLA YYL+ Q +F LTL FV+L SL V
Sbjct: 100 LGREQRRYSLWDCLWILAAVAVYFADVGTDVWLAVDYYLRGQRWWFGLTLFFVVLGSLSV 159
Query: 105 QLLSFRWFVYDYSEP--------AGSPGPAVSTKDSVAGGAAIST---------KDSAGA 147
Q+ SFRWFV+D+S + P P K V GG+A + ++ A
Sbjct: 160 QVFSFRWFVHDFSTEDSATAAAASSCPQPGADCKTVVGGGSAAGEGEARPSTPQRQASNA 219
Query: 148 FRTKEGSPEPGPQP--APSSASAYRRRCCRLCIWLLQTLVHLLQLGQVWRYLRALYLGLQ 205
++ + G A ++ +R C CIWLLQ+L+H+LQLGQ+WRY +YLG++
Sbjct: 220 SKSNIAAANSGSNSSGATRASGKHRSASCSFCIWLLQSLIHILQLGQIWRYFHTIYLGIR 279
Query: 206 SRWRGERLRRHFYWQMLFESADVSMLRLLETFLRSAPQLVLQLSLLVHRGGAPDLLPALS 265
SR GE R FYW+M++E ADVSML LL TFL SAPQLVLQL ++V L +
Sbjct: 280 SRQSGENDRWRFYWKMVYEYADVSMLHLLATFLESAPQLVLQLCIIVQTHSL-QALQGFT 338
Query: 266 TSASLVSLAWTLASYQKVLRDSRDDKRPLSYKGAVAQVLWHLFSIAARGLAFALFASVYK 325
+ASLVSLAW LASYQK LRDSRDDK+P+SY + Q WH F+IAAR + FALFASV++
Sbjct: 339 AAASLVSLAWALASYQKALRDSRDDKKPISYMAVIIQFCWHFFTIAARVITFALFASVFQ 398
Query: 326 LYFGIFIVAHWCVMTFWVIQGETDFCMSKWEEIIYNMVVGIIYIFCWFNVKEGRSRRRMT 385
LYFGIFIV HWC+MTFW++ ET+FC++KWEEI+++MVVGIIYIF WFNVKEGR+R R+
Sbjct: 399 LYFGIFIVLHWCIMTFWIVHCETEFCITKWEEIVFDMVVGIIYIFSWFNVKEGRTRCRLF 458
Query: 386 LYHCIVLLENAALTGFWYSSRNFS-TDFYSLIMVCVVASSFALGIFFMCVYYCLLHPNGP 444
+Y+ ++LLEN AL+ WY + D +++ +CVV SSF G+ FM +YY HPNGP
Sbjct: 459 IYYFVILLENTALSALWYLYKAPQIADAFAIPALCVVFSSFLTGVVFMLMYYAFFHPNGP 518
Query: 445 MLGPQAPGCIFRKASEPCGPPADAITSPPRSLP--RTTGAERDGASAGERAGTPTPPVFQ 502
G Q+P C + P D TS RS+ R+ ++RD A ER G PVFQ
Sbjct: 519 RFG-QSPSCACEDPAAAFTLPPDVATSTLRSISNNRSVVSDRDQKFA-ERDG--CVPVFQ 574
Query: 503 VRPGLPPTPVARTLRTEGPVIRIDLPRKKYPAWDAHFIDRRLRKTILALEYSSPATPRLQ 562
VRP P TP +R R E VI+IDL R +YPAW+ H +DR LRK ILA E SP+ PRLQ
Sbjct: 575 VRPTAPSTPSSRPPRIEESVIKIDLFRNRYPAWERHVLDRSLRKAILAFE-CSPSPPRLQ 633
Query: 563 YRSVGTSQELLEYETTV 579
Y+ QE LEYETT+
Sbjct: 634 YKDDALIQERLEYETTL 650
>gi|89886484 XK, Kell blood group complex subunit-related family,
member 6 isoform b [Homo sapiens]
Length = 641
Score = 526 bits (1356), Expect = e-149
Identities = 286/585 (48%), Positives = 365/585 (62%), Gaps = 61/585 (10%)
Query: 30 RGEAAAAAG-----PPGVVGAGG------------PGPRYELR--DCCWVLCALLVFFSD 70
R AAA G PP GAG P P+ E DC W++ ALLVFF D
Sbjct: 83 RRSAAADGGDQPLQPPAAPGAGRQPPTPSAARPEPPPPQVERPWLDCLWIVLALLVFFGD 142
Query: 71 GATDLWLAASYYLQNQHTYFSLTLLFVLLPSLVVQLLSFRWFVYDYS-------EPAGSP 123
TDLWLA YY + + YF LTL FVL+PSL+VQ LSFRWFV DY+ E S
Sbjct: 143 VGTDLWLALDYYRKGDYVYFGLTLFFVLVPSLLVQSLSFRWFVQDYTGGGLGAVEGLTSR 202
Query: 124 GPAVSTKDSVAGGAAISTKDSAGAFRTKEGSPEPGPQPAPSSASAYRRRCCRLCIWLLQT 183
GP + V G A G P P P + +R CRL +W+ Q+
Sbjct: 203 GPPMMGAGYVHGAA--------------RGGPGVRVSPTPGA-----QRLCRLSVWIWQS 243
Query: 184 LVHLLQLGQVWRYLRALYLGLQSRWRGERLRRHFYWQMLFESADVSMLRLLETFLRSAPQ 243
++HLLQ+GQVWRY+R +YLG+QS+ R E RR FYW M++E ADV+MLRLLETFL SAPQ
Sbjct: 244 VIHLLQMGQVWRYIRTMYLGIQSQRRKEHQRR-FYWAMMYEYADVNMLRLLETFLESAPQ 302
Query: 244 LVLQLSLLVHRGGAPDLLPALSTSASLVSLAWTLASYQKVLRDSRDDKRPLSYKGAVAQV 303
LVLQL +++ + A + LP +S+ SL+SLAW LASY K+LRDSRDDK+ +SY+GA+ QV
Sbjct: 303 LVLQLYIMLQKNSA-ETLPCVSSVTSLMSLAWVLASYHKLLRDSRDDKKSMSYRGAIIQV 361
Query: 304 LWHLFSIAARGLAFALFASVYKLYFGIFIVAHWCVMTFWVIQGETDFCMSKWEEIIYNMV 363
W LF+I++R ++FALFAS+++LYFGIF+V HWC M FW+I G TDFCMSKWEEI++NMV
Sbjct: 362 FWRLFTISSRVISFALFASIFQLYFGIFVVVHWCAMAFWIIHGGTDFCMSKWEEILFNMV 421
Query: 364 VGIIYIFCWFNVKEGRSRRRMTLYHCIVLLENAALTGFWYSSRN-FSTDFYSLIMVCVVA 422
VGI+YIFCWFNVKEGR+R RM Y+ IVL ENAALT WY R+ +TD Y++ +C V
Sbjct: 422 VGIVYIFCWFNVKEGRTRYRMFAYYTIVLTENAALTFLWYFYRDPETTDSYAVPALCCVF 481
Query: 423 SSFALGIFFMCVYYCLLHPNGPMLGPQAPGCI--------FRKASEPCGPPADAITSPPR 474
SF GI M +YY +LHP GP A C EP P
Sbjct: 482 ISFVAGIAMMLLYYGVLHPTGPRAKILASSCCAELLWGIPLPPDVEPMAPEIPGYRGTQV 541
Query: 475 SLPRTTGAERDGASAGERAGTPTPPVFQVRPGLPPTPVARTLRTEGPVIRIDLPRKKYPA 534
+ R +++ +A PVFQVRP PPTP+ R EGP+I+ID+PRK+YPA
Sbjct: 542 TPTRAVTEQQEDLTA-----DTCLPVFQVRPMGPPTPLGRPYLPEGPLIKIDMPRKRYPA 596
Query: 535 WDAHFIDRRLRKTILALEYSSPATPRLQYRSVGTSQELLEYETTV 579
WDAHF+DRRLR+TI L+Y +P ++YR ELL+YE+++
Sbjct: 597 WDAHFVDRRLRRTINILQYVTPTAVGIRYRDGPLLYELLQYESSL 641
>gi|24431977 XK, Kell blood group complex subunit-related family,
member 8 [Homo sapiens]
Length = 395
Score = 152 bits (384), Expect = 8e-37
Identities = 116/390 (29%), Positives = 169/390 (43%), Gaps = 56/390 (14%)
Query: 54 LRDCCWVLCALLVFFSDGATDLWLAASYYLQNQHTYFSLTLLFVLLPSLVVQLLSFRWFV 113
LRD + F D TDLW A Y L ++ + +L L + L S+ +QL S+ W
Sbjct: 10 LRDLVLGVLGTAAFLLDLGTDLWAAVQYALGGRYLWAALVLALLGLASVALQLFSWLWLR 69
Query: 114 YDYSEPAGSPGPAVSTKDSVAGGAAISTKDSAGAFRTKEGSPEPGPQPAPSSASAYRRRC 173
D PAG GS P RRC
Sbjct: 70 AD---PAGL-----------------------------HGSQPP-------------RRC 84
Query: 174 CRLCIWLLQTLVHLLQLGQVWRYLRALYLGLQSRWRGERLRRHFYWQMLFESADVSMLRL 233
L+HLLQLG ++R ++ L GL W+ E F + D+SMLRL
Sbjct: 85 L--------ALLHLLQLGYLYRCVQELRQGLLV-WQQEEPSEFDLAYADFLALDISMLRL 135
Query: 234 LETFLRSAPQLVLQLSLLVHRGGAPDLLPALSTSASLVSLAWTLASYQKVLRDSRDDKRP 293
ETFL +APQL L L++++ G A + + S + ++W L Y + LR K
Sbjct: 136 FETFLETAPQLTLVLAIMLQSGRA-EYYQWVGICTSFLGISWALLDYHRALRTCLPSKPL 194
Query: 294 LSYKGAVAQVLWHLFSIAARGLAFALFASVYKLYFGIFIVAHWCVMTFWVIQGETDFCMS 353
L +V LW+L + R LA ALF++++ Y + + W V+ WV TDF
Sbjct: 195 LGLGSSVIYFLWNLLLLWPRVLAVALFSALFPSYVALHFLGLWLVLLLWVWLQGTDFMPD 254
Query: 354 KWEEIIYNMVVGIIYIFCWFNVKEGRSRRRMTLYHCIVLLENAALTGFWYSSRNFSTDFY 413
E +Y + V I F WFNV EGR+R R ++ +L ++ L W + ++
Sbjct: 255 PSSEWLYRVTVATILYFSWFNVAEGRTRGRAIIHFAFLLSDSILLVATWVTHSSWLPSGI 314
Query: 414 SL-IMVCVVASSFALGIFFMCVYYCLLHPN 442
L + + V F LG+ VYY LHP+
Sbjct: 315 PLQLWLPVGCGCFFLGLALRLVYYHWLHPS 344
>gi|118722353 XK-related protein 5a [Homo sapiens]
Length = 339
Score = 120 bits (302), Expect = 3e-27
Identities = 74/217 (34%), Positives = 114/217 (52%), Gaps = 10/217 (4%)
Query: 184 LVHLLQLGQVWRYLRALYLGLQSRWRGERLRRHFYWQMLFESADVSMLRLLETFLRSAPQ 243
++HLLQLG R+ A LQ H W L E AD+S LRLLE L++ P
Sbjct: 70 MLHLLQLGVWKRHWDAALTSLQKELEAP----HRGWLQLQE-ADLSALRLLEALLQTGPH 124
Query: 244 LVLQLSLLVHRGGAPDLLPALSTSASLVSLAWTLASYQKVLRDSRDDKRPLSYKGAVAQV 303
L+LQ + + D++P +ST S SL+W L SY + + + + + Q
Sbjct: 125 LLLQTYVFL-ASDFTDIVPGVSTLFSWSSLSWALVSYTRFMGFMKPGHLAMPWAALFCQQ 183
Query: 304 LWHLFSIAARGLAFALFASVYKLYFGIFIVA--HWCVMTFWVIQGETDFCMSKWEEIIYN 361
LW + + R L+ LF Y +F +F+VA HW VMTFW++ ++D S ++N
Sbjct: 184 LWRMGMLGTRVLSLVLFYKAY--HFWVFVVAGAHWLVMTFWLVAQQSDIIDSTCHWRLFN 241
Query: 362 MVVGIIYIFCWFNVKEGRSRRRMTLYHCIVLLENAAL 398
++VG +YI C+ + + SR RM ++ ++LLEN L
Sbjct: 242 LLVGAVYILCYLSFWDSPSRNRMVTFYMVMLLENIIL 278
>gi|58743325 XK, Kell blood group complex subunit-related family,
member 9 [Homo sapiens]
Length = 373
Score = 114 bits (286), Expect = 2e-25
Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 12/269 (4%)
Query: 184 LVHLLQLGQVWRYLRALYLGLQSRWRGERLRRHF-------YWQMLFESADVSMLRLLET 236
L+H LQ G RY AL G + ++ + +F + +++ D+SMLRL ET
Sbjct: 80 LLHCLQGGVFTRYWFALKRGYHAAFKYDSNTSNFVEEQIDLHKEVIDRVTDLSMLRLFET 139
Query: 237 FLRSAPQLVLQLSLLVHRGGAPDLLPALSTSASLVSLAWTLASYQKVLRDSRDDKRPLS- 295
+L PQL+LQL +L+ G A + + S +++W+ YQ LR S DK+ L+
Sbjct: 140 YLEGCPQLILQLYILLEHGQA-NFSQYAAIMVSCCAISWSTVDYQVALRKSLPDKKLLNG 198
Query: 296 YKGAVAQVLWHLFSIAARGLAFALFASVYKLYFGIFIVAHWCVMTFWVIQGETDFCMSKW 355
+ + + LF++ + L+ L + ++ W + W + T FC
Sbjct: 199 LCPKITYLFYKLFTLLSWMLSVVLLLFLNVKIALFLLLFLWLLGIIWAFKNNTQFCTCIS 258
Query: 356 EEIIYNMVVGIIYIFCWFNVKEGRSRRRMTLYHCI-VLLENAALTGFWYSSRN-FSTDFY 413
E +Y +VVG I IF +FN+K ++ M+ Y+ + VL LT FW F+ D++
Sbjct: 259 MEFLYRIVVGFILIFTFFNIKGQNTKCPMSCYYIVRVLGTLGILTVFWVCPLTIFNPDYF 318
Query: 414 SLIMVCVVASSFALGIFFMCVYYCLLHPN 442
I + +V + LGI F+ VYY HPN
Sbjct: 319 IPISITIVL-TLLLGILFLIVYYGSFHPN 346
Score = 43.1 bits (100), Expect = 7e-04
Identities = 16/65 (24%), Positives = 37/65 (56%)
Query: 51 RYELRDCCWVLCALLVFFSDGATDLWLAASYYLQNQHTYFSLTLLFVLLPSLVVQLLSFR 110
+Y ++ + ++++ +D D+W++ ++ + Q+ + +L L F+L +LV Q S+
Sbjct: 2 KYTKQNFMMSVLGIIIYVTDLIVDIWVSVRFFHEGQYVFSALALSFMLFGTLVAQCFSYS 61
Query: 111 WFVYD 115
WF D
Sbjct: 62 WFKAD 66
>gi|10835267 membrane transport protein XK [Homo sapiens]
Length = 444
Score = 63.2 bits (152), Expect = 6e-10
Identities = 76/315 (24%), Positives = 128/315 (40%), Gaps = 61/315 (19%)
Query: 181 LQTLVHLLQLGQVWRYLRALYLGLQS------------------RWRGERLRRHF---YW 219
L L+HLLQLG ++R + QS E + +
Sbjct: 68 LVLLLHLLQLGPLFRCFEVFCIYFQSGNNEEPYVSITKKRQMPKNGLSEEIEKEVGQAEG 127
Query: 220 QMLFESADVSMLRLLETFLRSAPQLVLQLSLLVHRGGAPDLLPALSTSASLVSLAWTLAS 279
+++ + S +++ FL SAPQL LQL + V + + +L + SL+S+ +
Sbjct: 128 KLITHRSAFSRASVIQAFLGSAPQLTLQLYISVMQQDV-TVGRSLLMTISLLSIVYGALR 186
Query: 280 YQ----KVLRDSRDDK-RPLSYKGAVAQVLWHLFSIAARGLAFALFASVYKLYFGIFIVA 334
K+ D + K +PL+Y V LW F IA R + LF SV K + + I+
Sbjct: 187 CNILAIKIKYDEYEVKVKPLAY---VCIFLWRSFEIATRVVVLVLFTSVLKTWVVVIILI 243
Query: 335 HWCV------MTFWV----IQGETDFCMSKWEEIIYNMVVGIIY----IFCWFNVK---- 376
++ + FW + +S+ I + ++Y +FCW V+
Sbjct: 244 NFFSFFLYPWILFWCSGSPFPENIEKALSRVGTTIVLCFLTLLYTGINMFCWSAVQLKID 303
Query: 377 ------EGRSRRRMTLYHCIVLLENAALTGFWYSSRNFSTDFYSLI----MVCVVASSFA 426
+ + ++ +Y+ I +ENA L WY F TD Y + +V + +
Sbjct: 304 SPDLISKSHNWYQLLVYYMIRFIENAILLLLWYL---FKTDIYMYVCAPLLVLQLLIGYC 360
Query: 427 LGIFFMCVYYCLLHP 441
I FM V+Y HP
Sbjct: 361 TAILFMLVFYQFFHP 375
Score = 32.0 bits (71), Expect = 1.6
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 60 VLCALLVFFSDGATDLWLAASYYLQNQHTYFSLTLLFVLLPSLVVQL 106
VL ++ +F ++ L L+++Y + +LTLLF LLP +VQL
Sbjct: 7 VLASVFLFVAETTAALSLSSTYRSGGDRMWQALTLLFSLLPCALVQL 53
>gi|237874249 XK, Kell blood group complex subunit-related, X-linked
[Homo sapiens]
Length = 449
Score = 43.5 bits (101), Expect = 5e-04
Identities = 71/315 (22%), Positives = 128/315 (40%), Gaps = 59/315 (18%)
Query: 181 LQTLVHLLQLGQVWRYLRAL--YLGLQSRWRGERLRRHFYW----QMLFESADVSM---- 230
L +HL+ LG V R L A+ YL L W+ E + +ML + +V +
Sbjct: 98 LSLFMHLILLGPVIRCLEAMIKYLTL---WKKEEQEEPYVSLTRKKMLIDGEEVLIEWEV 154
Query: 231 ----------------LRLLETFLRSAPQLVLQLSLLVHRGGAPDLLPALSTSASLVSLA 274
+ ++ FL S PQL QL + + P L + SLVS+
Sbjct: 155 GHSIRTLAMHRNAYKRMSQIQAFLGSVPQLTYQLYVSLISAEVP-LGRVVLMVFSLVSVT 213
Query: 275 W--TLASYQKVLRDSRDDKRPLSYKGAVAQVLWHLFSIAARGLAFALFASVYKLYFGIFI 332
+ TL + + D K L + +W I +R L LF++ KL F+
Sbjct: 214 YGATLCNMLAIQIKYDDYKIRLGPLEVLCITIWRTLEITSRLLILVLFSATLKLKAVPFL 273
Query: 333 VAHWCVMTF--WV--------IQGETDFCMSKWEEIIYNMVVGIIY----IFCWFN---- 374
V ++ ++ F W+ + + S+ ++ + V I+Y CW
Sbjct: 274 VLNFLIILFEPWIKFWRSGAQMPNNIEKNFSRVGTLVVLISVTILYAGINFSCWSALQLR 333
Query: 375 ------VKEGRSRRRMTLYHCIVLLENA--ALTGFWYSSRNFSTDFYSLIMVCVVASSFA 426
V +G++ M L++ + L+EN L ++ + +SLI + ++ ++
Sbjct: 334 LADRDLVDKGQNWGHMGLHYSVRLVENVIMVLVFKFFGVKVLLNYCHSLIALQLII-AYL 392
Query: 427 LGIFFMCVYYCLLHP 441
+ I FM +++ LHP
Sbjct: 393 ISIGFMLLFFQYLHP 407
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 41.2 bits (95), Expect = 0.003
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 1 MAAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPG------VVGAGGPGPRYEL 54
+ A + A S G AGGA G+A G G A A AG PG +GA RYE
Sbjct: 331 LVAGHEKVACSGGAPGAGGAGGAGGAAAGAGAAGAGAGGPGGRGEYEELGAVEQHVRYET 390
Query: 55 RD--CCWVLCALLVFFSDGATDLWLAAS 80
C V+ L+ FF ++ W+ S
Sbjct: 391 TGPALCTVVFLLVYFFGMASSIWWVILS 418
Score = 30.0 bits (66), Expect = 6.1
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 18 GAAGGARGSAGGRGEAAAAAGPPGVVGAGGPG 49
G GA + GG G G PG G GGPG
Sbjct: 630 GGGAGATAAGGGGGPGGGGGGGPG--GGGGPG 659
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 39.7 bits (91), Expect = 0.008
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 2 AAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGP-PGV 42
AA +G +A A+P P AAGG G +G G AAAA P PGV
Sbjct: 301 AAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGV 342
Score = 35.8 bits (81), Expect = 0.11
Identities = 21/74 (28%), Positives = 28/74 (37%)
Query: 448 PQAPGCIFRKASEPCGPPADAITSPPRSLPRTTGAERDGASAGERAGTPTPPVFQVRPGL 507
P AP + R P GPP A PP + + G+ + AG P Q PG
Sbjct: 274 PPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGA 333
Query: 508 PPTPVARTLRTEGP 521
A ++ E P
Sbjct: 334 AAAAPAPGVKAESP 347
Score = 33.9 bits (76), Expect = 0.42
Identities = 22/42 (52%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 9 AASASPDPEGAAGGARGSAGGR-GEAAAAAGPPGVVGAGGPG 49
AA A P P A G GSAG A AA GP GV G GPG
Sbjct: 293 AAPAVPPPAAAQNG--GSAGAAPAPAPAAGGPAGVSGQPGPG 332
Score = 30.4 bits (67), Expect = 4.7
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 8 AAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPGP 50
AAA+ + PE A G AG AA A PG GPGP
Sbjct: 142 AAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGP 184
Score = 30.0 bits (66), Expect = 6.1
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 6 DGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPGP 50
+G+A S +P P AA A G A AGP + GPGP
Sbjct: 131 EGSAGSCAPVP-AAAAVAAGPEPAPAGPAKPAGPAALAARAGPGP 174
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 38.9 bits (89), Expect = 0.013
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 9/53 (16%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAA--AAAGPPGVVG-------AGGPGP 50
G A + P E GG +G G +GEA AAGPPG G G PGP
Sbjct: 1270 GEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGP 1322
Score = 34.7 bits (78), Expect = 0.25
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 16 PEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGGP-GP 50
P GAAG G +G G +GE A A GPPG G GP GP
Sbjct: 1376 PPGAAGAEGRQGEKGAKGE-AGAEGPPGKTGPVGPQGP 1412
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
Query: 16 PEGAAG-----GARGSAGGRGEA-----AAAAGPPGVVGAGGP 48
P GA G G+ GS GG GE A GPPG G GGP
Sbjct: 1244 PNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGP 1286
Score = 30.8 bits (68), Expect = 3.6
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 2 AAKSDGAAASASPDPEGAAG-----GARGSAGGRGEAAAAAGPPGVVGAGGP-GP 50
AA +GA P P+G +G G RG G RG A G PG+ G GP GP
Sbjct: 1013 AAGKEGA--KGDPGPQGISGKDGPAGLRGFPGERG-LPGAQGAPGLKGGEGPQGP 1064
Score = 30.4 bits (67), Expect = 4.7
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 11 SASPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGG-PGP 50
+ P P G G G RGS G RG GP G G G PGP
Sbjct: 885 AGKPGPRGQRGPTGPRGSRGARG-PTGKPGPKGTSGGDGPPGP 926
Score = 30.0 bits (66), Expect = 6.1
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 16/59 (27%)
Query: 8 AAASASPDPEGAAG-----GARGSAGGRGEAAAAAGPPGVVG-------AGG---PGPR 51
A + SP +G G G +GS G +GE GPPG+ G AGG PGPR
Sbjct: 1128 AGPAGSPGEDGDKGEIGEPGQKGSKGDKGE-NGPPGPPGLQGPVGAPGIAGGDGEPGPR 1185
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 38.9 bits (89), Expect = 0.013
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 9/53 (16%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAA--AAAGPPGVVG-------AGGPGP 50
G A + P E GG +G G +GEA AAGPPG G G PGP
Sbjct: 1219 GEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGP 1271
Score = 34.7 bits (78), Expect = 0.25
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 16 PEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGGP-GP 50
P GAAG G +G G +GE A A GPPG G GP GP
Sbjct: 1325 PPGAAGAEGRQGEKGAKGE-AGAEGPPGKTGPVGPQGP 1361
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
Query: 16 PEGAAG-----GARGSAGGRGEA-----AAAAGPPGVVGAGGP 48
P GA G G+ GS GG GE A GPPG G GGP
Sbjct: 1193 PNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGP 1235
Score = 30.8 bits (68), Expect = 3.6
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 2 AAKSDGAAASASPDPEGAAG-----GARGSAGGRGEAAAAAGPPGVVGAGGP-GP 50
AA +GA P P+G +G G RG G RG A G PG+ G GP GP
Sbjct: 962 AAGKEGA--KGDPGPQGISGKDGPAGLRGFPGERG-LPGAQGAPGLKGGEGPQGP 1013
Score = 30.4 bits (67), Expect = 4.7
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 11 SASPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGG-PGP 50
+ P P G G G RGS G RG GP G G G PGP
Sbjct: 834 AGKPGPRGQRGPTGPRGSRGARG-PTGKPGPKGTSGGDGPPGP 875
Score = 30.0 bits (66), Expect = 6.1
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 16/59 (27%)
Query: 8 AAASASPDPEGAAG-----GARGSAGGRGEAAAAAGPPGVVG-------AGG---PGPR 51
A + SP +G G G +GS G +GE GPPG+ G AGG PGPR
Sbjct: 1077 AGPAGSPGEDGDKGEIGEPGQKGSKGDKGE-NGPPGPPGLQGPVGAPGIAGGDGEPGPR 1134
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 38.9 bits (89), Expect = 0.013
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 9/53 (16%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAA--AAAGPPGVVG-------AGGPGP 50
G A + P E GG +G G +GEA AAGPPG G G PGP
Sbjct: 1258 GEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGP 1310
Score = 34.7 bits (78), Expect = 0.25
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 16 PEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGGP-GP 50
P GAAG G +G G +GE A A GPPG G GP GP
Sbjct: 1364 PPGAAGAEGRQGEKGAKGE-AGAEGPPGKTGPVGPQGP 1400
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
Query: 16 PEGAAG-----GARGSAGGRGEA-----AAAAGPPGVVGAGGP 48
P GA G G+ GS GG GE A GPPG G GGP
Sbjct: 1232 PNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGP 1274
Score = 30.8 bits (68), Expect = 3.6
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 2 AAKSDGAAASASPDPEGAAG-----GARGSAGGRGEAAAAAGPPGVVGAGGP-GP 50
AA +GA P P+G +G G RG G RG A G PG+ G GP GP
Sbjct: 1001 AAGKEGA--KGDPGPQGISGKDGPAGLRGFPGERG-LPGAQGAPGLKGGEGPQGP 1052
Score = 30.4 bits (67), Expect = 4.7
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 11 SASPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGG-PGP 50
+ P P G G G RGS G RG GP G G G PGP
Sbjct: 873 AGKPGPRGQRGPTGPRGSRGARG-PTGKPGPKGTSGGDGPPGP 914
Score = 30.0 bits (66), Expect = 6.1
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 16/59 (27%)
Query: 8 AAASASPDPEGAAG-----GARGSAGGRGEAAAAAGPPGVVG-------AGG---PGPR 51
A + SP +G G G +GS G +GE GPPG+ G AGG PGPR
Sbjct: 1116 AGPAGSPGEDGDKGEIGEPGQKGSKGDKGE-NGPPGPPGLQGPVGAPGIAGGDGEPGPR 1173
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 38.9 bits (89), Expect = 0.013
Identities = 26/50 (52%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 6 DGAAASASPDPEGAAG--GARGSAGGRGEAA--AAAGPPGVVG-AGGPGP 50
DGA AS P P GA G G RG AG RG GPPG G G PGP
Sbjct: 43 DGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGP 92
>gi|103471991 X Kell blood group precursor-related family, member 3
[Homo sapiens]
Length = 459
Score = 38.9 bits (89), Expect = 0.013
Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 47/263 (17%)
Query: 213 LRRHFYWQMLFESADVSMLRLLETFLRSAPQLVLQLSLLVHRGGAPDLLPALSTSASLVS 272
+R +F Q F+ V ++ FL S PQL+LQ+ + + P L AL + SL+S
Sbjct: 153 IRDNFMQQKAFKYMSV-----IQAFLGSVPQLILQMYISLTIREWP-LNRALLMTFSLLS 206
Query: 273 LAW-TLASYQKVLRDSRDDKR----PLSYKGAVAQVLWHLFSIAARGLAFALFASVYKL- 326
+ + + ++ S DD P+ + V+W + +R + A F + KL
Sbjct: 207 VTYGAIRCNILAIQISNDDTTIKLPPIEF---FCVVMWRFLEVISRVVTLAFFIASLKLK 263
Query: 327 --------YFGIFIVAHWCVMTFWV----IQGETDFCMSKWEEIIYNMVVGIIY----IF 370
YF + ++A W + FW + G + + ++ ++ ++Y
Sbjct: 264 SLPVLLIIYF-VSLLAPW--LEFWKSGAHLPGNKENNSNMVGTVLMLFLITLLYAAINFS 320
Query: 371 CWFNVK---------EGRSR-RRMTLYHCIVLLENA--ALTGFWYSSRNFSTDFYSLIMV 418
CW VK +GR R L++ LEN L ++ + SLI V
Sbjct: 321 CWSAVKLQLSDDKIIDGRQRWGHRILHYSFQFLENVIMILVFRFFGGKTLLNCCDSLIAV 380
Query: 419 CVVASSFALGIFFMCVYYCLLHP 441
++ S+ L FM ++Y L+P
Sbjct: 381 QLII-SYLLATGFMLLFYQYLYP 402
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 37.7 bits (86), Expect = 0.029
Identities = 20/50 (40%), Positives = 22/50 (44%)
Query: 1 MAAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPGP 50
M+ S G P P G GGA G+ GG AG G G GG GP
Sbjct: 1 MSDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGP 50
Score = 34.7 bits (78), Expect = 0.25
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPG-VVGAGGPGPR 51
GA P P GA G GG G +AG P G GGPG R
Sbjct: 25 GAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGIR 70
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 37.0 bits (84), Expect = 0.050
Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 14/53 (26%)
Query: 13 SPDPEGAAG--------GARGSAGGRGEAAAAA-----GPPGVVGAGGP-GPR 51
SP P GA+G GA+GSAG G A A GPPG GA GP GP+
Sbjct: 400 SPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPK 452
Score = 35.0 bits (79), Expect = 0.19
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 3 AKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGP 48
A ++G P + GARG+ G RGE GPPG G GP
Sbjct: 797 AGANGEKGEVGPPGPAGSAGARGAPGERGE----TGPPGPAGFAGP 838
Score = 33.5 bits (75), Expect = 0.55
Identities = 22/35 (62%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Query: 16 PEGAAGGARGSAGGRGEAAAAAGPPGVVG-AGGPG 49
P GAAG ARG+ G G AGPPG VG AGGPG
Sbjct: 337 PAGAAG-ARGNDGQPG----PAGPPGPVGPAGGPG 366
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 11 SASPDPEGAAG-----GARGSAGGRGE-----AAAAAGPPGVVG-AGGPGP 50
S +P P+G G GARG+ G G AA GPPG G G PGP
Sbjct: 869 SGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGP 919
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 7/43 (16%)
Query: 13 SPDPEGAAG--GARGSAGGRGEAAA-----AAGPPGVVGAGGP 48
SP +G G GA G G RGE A A GPPG G GP
Sbjct: 1039 SPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGP 1081
Score = 30.8 bits (68), Expect = 3.6
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 6 DGAAASASPDPEGAAGGARGSAGGRGEAA--AAAGPPGVVGAGG-PG 49
DG +A P G RG G G + GPPG G GG PG
Sbjct: 635 DGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPG 681
Score = 30.4 bits (67), Expect = 4.7
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 5 SDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVG-AGGPGPRYELRD 56
+D A AS P P+G +G G + GPPG G AG GPR + D
Sbjct: 91 TDLATASGQPGPKGQ----KGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGD 139
Score = 30.4 bits (67), Expect = 4.7
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 12/61 (19%)
Query: 2 AAKSDGAAASAS-PDPEGAAGGA--RGSAGGRGEA--AAAAGPPGVVG-------AGGPG 49
A +DG A P P G AGG G+ G +GEA A GP G G G PG
Sbjct: 343 ARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPG 402
Query: 50 P 50
P
Sbjct: 403 P 403
Score = 30.4 bits (67), Expect = 4.7
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEA--AAAAGPPGVVGAGGP-GP 50
G A A P GA+G G G+ A A GP G GA GP GP
Sbjct: 831 GPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP 877
Score = 30.0 bits (66), Expect = 6.1
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 8 AAASASPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGG 47
A +P P G G GARG GG G GPPG GA G
Sbjct: 476 AGPQGAPGPAGEEGKRGARGEPGGVGPI----GPPGERGAPG 513
Score = 30.0 bits (66), Expect = 6.1
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 14/57 (24%)
Query: 7 GAAASASPDPE----GAAG--GARGSAGGRGEAAAAAGPPGVVGAGG-------PGP 50
GAA A P + G G GA G GGRG GPPG GA G PGP
Sbjct: 756 GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG-LTGPIGPPGPAGANGEKGEVGPPGP 811
Score = 30.0 bits (66), Expect = 6.1
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 2 AAKSDGAAASASPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVG----AGGPGP 50
A + A A P GA G G G G +G A A GPPG G AG GP
Sbjct: 854 AGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKG-ARGAQGPPGATGFPGAAGRVGP 907
Score = 29.6 bits (65), Expect = 7.9
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 10 ASASPDPEGAAG--GARGSAGGRGEAA--AAAGPPGVVG-AGGPGPRYELRD 56
++ +P P G G G G G RG++ AG PG+ G AG PG + E D
Sbjct: 910 SNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGD 961
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 37.0 bits (84), Expect = 0.050
Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 14/53 (26%)
Query: 13 SPDPEGAAG--------GARGSAGGRGEAAAAA-----GPPGVVGAGGP-GPR 51
SP P GA+G GA+GSAG G A A GPPG GA GP GP+
Sbjct: 331 SPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPK 383
Score = 35.0 bits (79), Expect = 0.19
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 3 AKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGP 48
A ++G P + GARG+ G RGE GPPG G GP
Sbjct: 728 AGANGEKGEVGPPGPAGSAGARGAPGERGE----TGPPGPAGFAGP 769
Score = 33.5 bits (75), Expect = 0.55
Identities = 22/35 (62%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Query: 16 PEGAAGGARGSAGGRGEAAAAAGPPGVVG-AGGPG 49
P GAAG ARG+ G G AGPPG VG AGGPG
Sbjct: 268 PAGAAG-ARGNDGQPG----PAGPPGPVGPAGGPG 297
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 11 SASPDPEGAAG-----GARGSAGGRGE-----AAAAAGPPGVVG-AGGPGP 50
S +P P+G G GARG+ G G AA GPPG G G PGP
Sbjct: 800 SGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGP 850
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 7/43 (16%)
Query: 13 SPDPEGAAG--GARGSAGGRGEAAA-----AAGPPGVVGAGGP 48
SP +G G GA G G RGE A A GPPG G GP
Sbjct: 970 SPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGP 1012
Score = 30.8 bits (68), Expect = 3.6
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 6 DGAAASASPDPEGAAGGARGSAGGRGEAA--AAAGPPGVVGAGG-PG 49
DG +A P G RG G G + GPPG G GG PG
Sbjct: 566 DGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPG 612
Score = 30.4 bits (67), Expect = 4.7
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 12/61 (19%)
Query: 2 AAKSDGAAASAS-PDPEGAAGGA--RGSAGGRGEA--AAAAGPPGVVG-------AGGPG 49
A +DG A P P G AGG G+ G +GEA A GP G G G PG
Sbjct: 274 ARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPG 333
Query: 50 P 50
P
Sbjct: 334 P 334
Score = 30.4 bits (67), Expect = 4.7
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEA--AAAAGPPGVVGAGGP-GP 50
G A A P GA+G G G+ A A GP G GA GP GP
Sbjct: 762 GPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP 808
Score = 30.0 bits (66), Expect = 6.1
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 8 AAASASPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGG 47
A +P P G G GARG GG G GPPG GA G
Sbjct: 407 AGPQGAPGPAGEEGKRGARGEPGGVG----PIGPPGERGAPG 444
Score = 30.0 bits (66), Expect = 6.1
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 14/57 (24%)
Query: 7 GAAASASPDPE----GAAG--GARGSAGGRGEAAAAAGPPGVVGAGG-------PGP 50
GAA A P + G G GA G GGRG GPPG GA G PGP
Sbjct: 687 GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG-LTGPIGPPGPAGANGEKGEVGPPGP 742
Score = 30.0 bits (66), Expect = 6.1
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 2 AAKSDGAAASASPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVG----AGGPGP 50
A + A A P GA G G G G +G A A GPPG G AG GP
Sbjct: 785 AGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKG-ARGAQGPPGATGFPGAAGRVGP 838
Score = 29.6 bits (65), Expect = 7.9
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 10 ASASPDPEGAAG--GARGSAGGRGEAA--AAAGPPGVVG-AGGPGPRYELRD 56
++ +P P G G G G G RG++ AG PG+ G AG PG + E D
Sbjct: 841 SNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGD 892
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 37.0 bits (84), Expect = 0.050
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 463 GPPADAITSPPRSLPRTTGAERDGASAGERAGTPTPPVFQVRPGLPPTPVARTLRTE 519
GPP T PP +P T + A E G PTPP P PP V + + E
Sbjct: 760 GPPPGPPTPPPEDIPAPT----EPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEE 812
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 37.0 bits (84), Expect = 0.050
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 463 GPPADAITSPPRSLPRTTGAERDGASAGERAGTPTPPVFQVRPGLPPTPVARTLRTE 519
GPP T PP +P T + A E G PTPP P PP V + + E
Sbjct: 777 GPPPGPPTPPPEDIPAPT----EPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEE 829
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 37.0 bits (84), Expect = 0.050
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGG 47
G+AA+++ GA GG SAGG G G G GAGG
Sbjct: 204 GSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244
Score = 34.3 bits (77), Expect = 0.32
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 3 AKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPG 49
A + GAA SA+ A+ G G AGG G A+A G G G GG G
Sbjct: 197 AGAPGAAGSAA-----ASAGGAGGAGGGGPASAGGGGGGGGGGGGGG 238
Score = 33.1 bits (74), Expect = 0.72
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 2 AAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAG 38
AA + GA + P A GG G GG G AA AG
Sbjct: 207 AASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAG 243
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 37.0 bits (84), Expect = 0.050
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGG 47
G+AA+++ GA GG SAGG G G G GAGG
Sbjct: 204 GSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244
Score = 34.3 bits (77), Expect = 0.32
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 3 AKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPG 49
A + GAA SA+ A+ G G AGG G A+A G G G GG G
Sbjct: 197 AGAPGAAGSAA-----ASAGGAGGAGGGGPASAGGGGGGGGGGGGGG 238
Score = 33.1 bits (74), Expect = 0.72
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 2 AAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAG 38
AA + GA + P A GG G GG G AA AG
Sbjct: 207 AASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAG 243
>gi|7706435 headcase [Homo sapiens]
Length = 543
Score = 37.0 bits (84), Expect = 0.050
Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 4 KSDGAAASASPDPEGAA-GGARGSAGGRGEAAAAAGPPGVVGAGGPG 49
+ +GA A A+ GAA GGA +A G G AAAAG PG GA G G
Sbjct: 23 QENGAGALAAAGAAGAAAGGALAAAAGCG--AAAAGAPGAGGAAGAG 67
Score = 33.5 bits (75), Expect = 0.55
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 2 AAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPGP 50
AA GAAA+ +P GAAG A G+ G AAAAAG A P
Sbjct: 46 AAAGCGAAAAGAPGAGGAAG-AGGAGTGAANAAAAAGAAAAGDAKNEAP 93
>gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5
preproprotein [Homo sapiens]
Length = 862
Score = 36.6 bits (83), Expect = 0.065
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 25/103 (24%)
Query: 449 QAPGCIFRKA----SEPCGPPADAITS-------------PPRSLPRTTGAERDGASAGE 491
+ P C +R A SE GPP A+ + P R LP ++R A +
Sbjct: 729 KGPTCQYRAAQSGPSERPGPPQRALLARGTKASALSFPAPPSRPLPPDPVSKRLQAELAD 788
Query: 492 RAGTPTPPVFQVRPGLPPTPVARTLRTEGPVIRIDLPRKKYPA 534
R PT P LP PV R+ +++GP + PRK PA
Sbjct: 789 RPNPPTRP-------LPADPVVRSPKSQGPA-KPPPPRKPLPA 823
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 36.6 bits (83), Expect = 0.065
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 13 SPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVG-AGGPG 49
SP P G +G GARG G +G+ A+ GPPG G G PG
Sbjct: 1055 SPGPPGFSGIDGARGPKGNKGDPASHFGPPGPKGEPGSPG 1094
Score = 30.0 bits (66), Expect = 6.1
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
Query: 7 GAAASASPDPEGAAG--GARGSAGGRGEAAAAA---------GPPGVVGAGGP-GPR 51
G+ + P P G G G GS+G G A A GPPG G GP GPR
Sbjct: 1216 GSPGISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPGPDGPR 1272
>gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens]
Length = 572
Score = 36.6 bits (83), Expect = 0.065
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 9/55 (16%)
Query: 2 AAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAA---------AGPPGVVGAGG 47
A G+A A+P A GG G AGG G A AG PG GAGG
Sbjct: 25 AGGGGGSAGGAAPSEGPAVGGVPGGAGGGGGVVGAGSGEDNRSSAGEPGSAGAGG 79
Score = 30.4 bits (67), Expect = 4.7
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 14 PDPEGAAGG--ARGSAGGRGEAAAAAGP-----PGVVGAGG 47
P P+ +AGG A G G G AA + GP PG G GG
Sbjct: 14 PRPDSSAGGSSAGGGGGSAGGAAPSEGPAVGGVPGGAGGGG 54
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 36.2 bits (82), Expect = 0.085
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 1 MAAKSDGAAASASPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVGA-GGPGP 50
+A + +P EG+ G G+ G+ G RGE AGPPG GA G PGP
Sbjct: 1005 LAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGE-TGPAGPPGAPGAPGAPGP 1056
Score = 34.7 bits (78), Expect = 0.25
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 17/64 (26%)
Query: 2 AAKSDGAAASASPD-PEGAAG--------GARGSAGGRGEAAAAA--------GPPGVVG 44
A +DGA +A P P G AG GA+G AG +G + GPPG G
Sbjct: 321 ARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAG 380
Query: 45 AGGP 48
A GP
Sbjct: 381 AAGP 384
Score = 34.7 bits (78), Expect = 0.25
Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 8 AAASASPDPEGAAG--GARGSAGGRGEAAAA--AGPPGVVGAGGP----GPR 51
A +P GA G G G +G RGE A AGP G VGA GP GPR
Sbjct: 1042 AGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPR 1093
Score = 33.9 bits (76), Expect = 0.42
Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Query: 16 PEGAAG-----GARGSAGGRGE--AAAAAGPPGVVGAGGP 48
P G G GA G AG RG A AAGPPG G GP
Sbjct: 303 PRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGP 342
Score = 33.9 bits (76), Expect = 0.42
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
Query: 16 PEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGGP 48
P G AG GARG+ G RGE GPPG G GP
Sbjct: 786 PSGPAGPTGARGAPGDRGE----PGPPGPAGFAGP 816
Score = 33.9 bits (76), Expect = 0.42
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVG-AGGPGP 50
G A A P GA+G G G A AGPPG G AG PGP
Sbjct: 809 GPAGFAGPPGADGQPGAKGEPGDAG-AKGDAGPPGPAGPAGPPGP 852
Score = 33.1 bits (74), Expect = 0.72
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 2 AAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAA--GPPGVVGA-GGPGPRYE 53
A + GA SA P GA G G G + A GPPG G GG GPR E
Sbjct: 858 APGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGE 912
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 10 ASASPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVG-AGGPGPR 51
A P +G G GA+G AG G A AGPPG +G G PG +
Sbjct: 819 ADGQPGAKGEPGDAGAKGDAGPPG-PAGPAGPPGPIGNVGAPGAK 862
Score = 32.0 bits (71), Expect = 1.6
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGAGGP-GPR 51
G A +A P A G G+ G G A AG PG GA GP GP+
Sbjct: 377 GPAGAAGPAGNPGADGQPGAKGANG-APGIAGAPGFPGARGPSGPQ 421
Score = 31.6 bits (70), Expect = 2.1
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 17/55 (30%)
Query: 14 PDPEGAAG-----------GARGSAGGRGEAAA-----AAGPPGVVGAGG-PGPR 51
P P GAAG GA+G+ G G A A A GP G G GG PGP+
Sbjct: 376 PGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPK 430
Score = 31.6 bits (70), Expect = 2.1
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 8 AAASASPDPEGAAG--GARGSAGGRGE--------AAAAAGPPGVVG-AGGPGP 50
A + P P G G GA+G+ G G AA GPPG G AG PGP
Sbjct: 844 AGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGP 897
Score = 31.2 bits (69), Expect = 2.7
Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 15/54 (27%)
Query: 8 AAASASPDPEGAAG--------------GARGSAGGRGEAAAAAGPPGVVGAGG 47
A P P+GAAG GA G AG GEA A GPPG G G
Sbjct: 577 AGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQ-GPPGPAGPAG 629
Score = 31.2 bits (69), Expect = 2.7
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVG-AGGPGPRYE 53
G + +A P G G G RGE AG PG VG G PGP E
Sbjct: 887 GPSGNAGPPGPPGPAGKEGGKGPRGE-TGPAGRPGEVGPPGPPGPAGE 933
Score = 30.4 bits (67), Expect = 4.7
Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 7 GAAASASPD-PEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGG-PGPR 51
GA A P P G+ G G RG G G A AAGP G GA G PG +
Sbjct: 350 GAKGEAGPQGPRGSEGPQGVRGEPGPPG-PAGAAGPAGNPGADGQPGAK 397
Score = 30.4 bits (67), Expect = 4.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Query: 5 SDGAAASASPDPEGAAGGARGSAGGRGEAA--AAAGPPGVVG----AGGPGP 50
+DG A P E + G G G GEA AG PG G G PGP
Sbjct: 498 ADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGP 549
Score = 30.0 bits (66), Expect = 6.1
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 14 PDPEGAAG--GARGSAGGRGEAAAAAGPPGVVGA-GGPGPRYE 53
P P+G +G GA GS G G A G PG VG G PGP E
Sbjct: 427 PGPKGNSGEPGAPGSKGDTG----AKGEPGPVGVQGPPGPAGE 465
Score = 30.0 bits (66), Expect = 6.1
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 9/49 (18%)
Query: 10 ASASPDPEGAAG-----GARGSAGGRGEAAAAA--GPPGVVGAGGPGPR 51
A P P G G G G G RGE GPPG GGPG R
Sbjct: 447 AKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGE--RGGPGSR 493
Score = 30.0 bits (66), Expect = 6.1
Identities = 23/64 (35%), Positives = 23/64 (35%), Gaps = 16/64 (25%)
Query: 2 AAKSDGAAASASPDPEGAAGGARGSAGGRGEAA-----AAAGPPGVVG----------AG 46
A K A A P P G AG RG G G AGPPG G G
Sbjct: 610 AGKDGEAGAQGPPGPAGPAG-ERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLG 668
Query: 47 GPGP 50
PGP
Sbjct: 669 APGP 672
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 36.2 bits (82), Expect = 0.085
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 12/58 (20%)
Query: 5 SDGAAAS-ASPDPEGAAG--------GARGSAGGRGEAAAAA--GPPGVVGA-GGPGP 50
S+GA P P+G AG G GS GG+GE A G PG++GA G PGP
Sbjct: 361 SNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGP 418
Score = 34.3 bits (77), Expect = 0.32
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 1 MAAKSDGAAASASPDPEGAAGGARGSAGGRGEAA--AAAGPPGVVGA-GGPGP 50
+A G+ + P P+G G RGS GG G A A G PG G+ G PGP
Sbjct: 841 VAGPPGGSGPAGPPGPQGVKG-ERGSPGGPGAAGFPGARGLPGPPGSNGNPGP 892
Score = 34.3 bits (77), Expect = 0.32
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 5 SDGA-AASASPDPEGAAGGARGSAGGRGEAAAA--AGPPGVVGA-GGPGPR 51
S GA A P P G G A G +G RGE+ A AG PG G+ G PGP+
Sbjct: 1039 SPGAPGAPGHPGPPGPVGPA-GKSGDRGESGPAGPAGAPGPAGSRGAPGPQ 1088
Score = 33.9 bits (76), Expect = 0.42
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Query: 14 PDPEGAAG--GARGSAGGRGEAAA-----AAGPPGVVG-AGGPGP 50
P P G G G G GG+GE A GPPGV G GG GP
Sbjct: 806 PGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGP 850
Score = 32.3 bits (72), Expect = 1.2
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 8 AAASASPDPEGAAG-----GARGSAGGRGEAAAAAGPPGVVGAGG 47
A A+ +P G AG GA+G G RGE AG PGV GA G
Sbjct: 419 AGANGAPGLRGGAGEPGKNGAKGEPGPRGE-RGEAGIPGVPGAKG 462
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 14 PDPEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGGP-GPR 51
P P G AG G RG +G G A A GP G GA GP GPR
Sbjct: 1052 PGPVGPAGKSGDRGESGPAG-PAGAPGPAGSRGAPGPQGPR 1091
Score = 32.0 bits (71), Expect = 1.6
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 22/58 (37%)
Query: 14 PDPEGAAGGARGSAGGRGEAAAAA--GPPGVVGA-------------------GGPGP 50
P P+G AG A G+ GG+G+A A GPPG+ GA G PGP
Sbjct: 659 PGPKGDAG-APGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGP 715
Score = 30.8 bits (68), Expect = 3.6
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 7 GAAASASPDPEGAAG-----------GARGSAGGRGEAAAAAGP--PGVVGAGGP-GP 50
G A+ P P GAAG G GS G +G+ GP GV G GP GP
Sbjct: 706 GKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGP 763
Score = 30.0 bits (66), Expect = 6.1
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 20 AGGARGSAGGRGE--AAAAAGPPGVVG-AGGPGPRYEL 54
A GARG+ G RG GPPG G G PG + E+
Sbjct: 316 AAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEV 353
Score = 30.0 bits (66), Expect = 6.1
Identities = 24/64 (37%), Positives = 25/64 (39%), Gaps = 20/64 (31%)
Query: 8 AAASASPDPEGAAG--GARGSAGGRGEAAA--AAGPPGVVGA----------------GG 47
A A P G AG G RG AG G AAGPPG GA G
Sbjct: 677 AGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGS 736
Query: 48 PGPR 51
PGP+
Sbjct: 737 PGPK 740
Score = 29.6 bits (65), Expect = 7.9
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 8 AAASASPDPEGAAG--GARGSAGGRGEA-----AAAAGPPGVVGAGGP-GP 50
A P P G +G G+ GS G +G A +GPPG GA GP GP
Sbjct: 176 AGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGP 226
Score = 29.6 bits (65), Expect = 7.9
Identities = 24/54 (44%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 2 AAKSDGAAASASPDPEGAAGGARGSAGGRGEAAAAAGPPGVVGA----GGPGPR 51
A SDG P P G A G GS G +GE AG PG GA G PGP+
Sbjct: 325 ARGSDGQPG--PPGPPGTA-GFPGSPGAKGE-VGPAGSPGSNGAPGQRGEPGPQ 374
Score = 29.6 bits (65), Expect = 7.9
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 7 GAAASASPDPEGAAGGARGSAGGRGEAA--AAAGPPGVVG-AGGPGPRYE 53
G A EG A G G AG RG GPPG G G PG E
Sbjct: 771 GPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGE 820
Score = 29.6 bits (65), Expect = 7.9
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 13 SPDPEGAAG--GARGSAGGRGEAAAAAGPPGVVG-AGGPGPR 51
SP +G G G G AG G A AGPPG+ G G PGP+
Sbjct: 934 SPGAQGPPGAPGPLGIAGITG-ARGLAGPPGMPGPRGSPGPQ 974
Score = 29.6 bits (65), Expect = 7.9
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 6 DGAAASASP-DPEGAAG--GARGSAGGRGEAAAAAGPPGVVGAGGP 48
DG + P P G G G RGS G G GPPG GA GP
Sbjct: 1151 DGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQP-GPPGPPGAPGP 1195
>gi|5032179 tripartite motif-containing 28 protein [Homo sapiens]
Length = 835
Score = 36.2 bits (82), Expect = 0.085
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 2 AAKSDGAAASASPDP-EGAAGGARGSAGGRGEAAAAAGPPGVVGAGGPGPRYELRDCCWV 60
A+ + +AAS SP P EG+AGG + S A+A+A AGG EL + C V
Sbjct: 8 ASAAAASAASGSPGPGEGSAGGEKRSTAPSAAASASASAAASSPAGGGAEALELLEHCGV 67
>gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6
preproprotein [Homo sapiens]
Length = 863
Score = 36.2 bits (82), Expect = 0.085
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 26/104 (25%)
Query: 449 QAPGCIFRKA----SEPCGPPADAITS--------------PPRSLPRTTGAERDGASAG 490
+ P C +R A SE GPP A+ + P R LP ++R A
Sbjct: 729 KGPTCQYRAAQSGPSERPGPPQRALLARGTKQASALSFPAPPSRPLPPDPVSKRLQAELA 788
Query: 491 ERAGTPTPPVFQVRPGLPPTPVARTLRTEGPVIRIDLPRKKYPA 534
+R PT P LP PV R+ +++GP + PRK PA
Sbjct: 789 DRPNPPTRP-------LPADPVVRSPKSQGPA-KPPPPRKPLPA 824
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,914,149
Number of Sequences: 37866
Number of extensions: 1434908
Number of successful extensions: 16903
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 252
Number of HSP's that attempted gapping in prelim test: 13761
Number of HSP's gapped (non-prelim): 3077
length of query: 579
length of database: 18,247,518
effective HSP length: 108
effective length of query: 471
effective length of database: 14,157,990
effective search space: 6668413290
effective search space used: 6668413290
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.