Guide to the Human Genome
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Name: XKR7 Sequence: fasta or formatted (579aa) NCBI GI: 58743323
Description:

XK, Kell blood group complex subunit-related family, member 7

Referenced in:

Hematopoiesis and Erythrocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         63           5
 C cysteine            2.6         15           2
 D aspartate           3.5         20           2
 E glutamate           3.8         22           2
 F phenylalanine       4.8         28           2
 G glycine             7.9         46           2
 H histidine           1.6          9           1
 I isoleucine          3.5         20           2
 K lysine              2.4         14           2
 L leucine            11.9         69           2
 M methionine          1.7         10           1
 N asparagine          1.0          6           1
 P proline             7.1         41           2
 Q glutamine           3.1         18           1
 R arginine            7.6         44           3
 S serine              8.5         49           2
 T threonine           4.8         28           2
 V valine              6.4         37           2
 W tryptophan          2.6         15           1
 Y tyrosine            4.3         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   XK, Kell blood group complex subunit-related family,... 
XKR4                  0.442   XK, Kell blood group complex subunit-related family,...
XKR6                  0.432   XK, Kell blood group complex subunit-related family,...
XKR8                  0.109   XK, Kell blood group complex subunit-related family,...
XKR5                  0.082   XK-related protein 5a 
XKR9                  0.077   XK, Kell blood group complex subunit-related family,...
XK                    0.033   membrane transport protein XK 
XKRX                  0.016   XK, Kell blood group complex subunit-related, X-lin...
FZD8                  0.014   frizzled 8 
TAF4                  0.013   TBP-associated factor 4 
COL11A1               0.012   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.012   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.012   alpha 1 type XI collagen isoform A preproprotein [Ho...
C1QL4                 0.012   complement component 1, q subcomponent-like 4 
XKR3                  0.012   X Kell blood group precursor-related family, member...
KHSRP                 0.011   KH-type splicing regulatory protein 
COL2A1                0.010   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.010   collagen, type II, alpha 1 isoform 2 precursor [Hom...
NCOR2                 0.010   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.010   nuclear receptor co-repressor 2 isoform 1 
MAF                   0.010   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.010   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
HECA                  0.010   headcase 
ADAM15                0.010   a disintegrin and metalloproteinase domain 15 isofor...
COL4A4                0.010   alpha 4 type IV collagen precursor 
ADRA1D                0.010   alpha-1D-adrenergic receptor 
COL1A1                0.009   alpha 1 type I collagen preproprotein 
COL3A1                0.009   collagen type III alpha 1 preproprotein 
TRIM28                0.009   tripartite motif-containing 28 protein 
ADAM15                0.009   a disintegrin and metalloproteinase domain 15 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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