Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: XK Sequence: fasta or formatted (444aa) NCBI GI: 10835267
Description:

membrane transport protein XK

Referenced in:

Hematopoiesis and Erythrocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         24           2
 C cysteine            3.6         16           1
 D aspartate           2.7         12           1
 E glutamate           4.7         21           2
 F phenylalanine       7.2         32           2
 G glycine             3.8         17           2
 H histidine           1.1          5           1
 I isoleucine          6.5         29           2
 K lysine              4.5         20           2
 L leucine            15.3         68           4
 M methionine          2.0          9           1
 N asparagine          2.3         10           2
 P proline             4.3         19           1
 Q glutamine           4.5         20           2
 R arginine            4.5         20           1
 S serine              9.0         40           3
 T threonine           4.7         21           2
 V valine              7.4         33           3
 W tryptophan          2.3         10           1
 Y tyrosine            4.1         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane transport protein XK 
XKRX                  0.388   XK, Kell blood group complex subunit-related, X-lin...
XKR3                  0.291   X Kell blood group precursor-related family, member...
LOC100289232          0.173   PREDICTED: hypothetical protein XP_002343935 
XKR4                  0.072   XK, Kell blood group complex subunit-related family,...
XKR6                  0.060   XK, Kell blood group complex subunit-related family,...
XKR5                  0.045   XK-related protein 5a 
XKR7                  0.044   XK, Kell blood group complex subunit-related family,...
XKRY                  0.044   XK, Kell blood group complex subunit-related, Y-link...
XKRY2                 0.044   XK, Kell blood group complex subunit-related, Y-link...
XKR8                  0.032   XK, Kell blood group complex subunit-related family,...
XKR9                  0.028   XK, Kell blood group complex subunit-related family,...
THADA                 0.015   thyroid adenoma associated 
THADA                 0.015   thyroid adenoma associated 
LMBR1L                0.012   lipocalin-interacting membrane receptor 
OR2D2                 0.009   olfactory receptor, family 2, subfamily D, member 2 ...
OR6C4                 0.007   olfactory receptor, family 6, subfamily C, member 4 ...
OR2A25                0.007   olfactory receptor, family 2, subfamily A, member 25...
OR2D3                 0.006   olfactory receptor, family 2, subfamily D, member 3 ...
OR2A14                0.006   olfactory receptor, family 2, subfamily A, member 14...
OR2A1                 0.006   olfactory receptor, family 2, subfamily A, member 1 ...
OR9Q2                 0.006   olfactory receptor, family 9, subfamily Q, member 2 ...
OR2A42                0.006   olfactory receptor, family 2, subfamily A, member 42...
GAB1                  0.006   GRB2-associated binding protein 1 isoform b 
GAB1                  0.006   GRB2-associated binding protein 1 isoform a 
OR2G6                 0.005   olfactory receptor, family 2, subfamily G, member 6 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press