Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FZD8 Sequence: fasta or formatted (694aa) NCBI GI: 13994190
Description:

frizzled 8

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         72           4
 C cysteine            3.9         27           2
 D aspartate           2.9         20           1
 E glutamate           3.9         27           2
 F phenylalanine       4.2         29           2
 G glycine            14.3         99           7
 H histidine           1.7         12           1
 I isoleucine          2.9         20           2
 K lysine              2.9         20           2
 L leucine             9.1         63           2
 M methionine          2.2         15           1
 N asparagine          1.9         13           1
 P proline             7.9         55           5
 Q glutamine           3.2         22           2
 R arginine            5.3         37           2
 S serine              6.3         44           2
 T threonine           4.5         31           2
 V valine              6.8         47           3
 W tryptophan          2.3         16           2
 Y tyrosine            3.6         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   frizzled 8 
FZD5                  0.532   frizzled 5 precursor 
FZD2                  0.348   frizzled 2 
FZD1                  0.336   frizzled 1 
FZD7                  0.333   frizzled 7 
FZD10                 0.311   frizzled 10 
FZD9                  0.297   frizzled 9 
FZD4                  0.218   frizzled 4 
FZD3                  0.172   frizzled 3 
FZD6                  0.165   frizzled 6 
SMO                   0.093   smoothened 
FRZB                  0.074   frizzled-related protein 
SFRP4                 0.067   secreted frizzled-related  protein 4 
SFRP2                 0.057   secreted frizzled-related protein 2 precursor 
SFRP5                 0.054   secreted frizzled-related protein 5 
SFRP1                 0.047   secreted frizzled-related protein 1 
CORIN                 0.045   corin 
MFRP                  0.031   membrane frizzled-related protein 
POU4F1                0.027   POU domain, class 4, transcription factor 1 
CPZ                   0.025   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.025   carboxypeptidase Z isoform 1 
EVX2                  0.024   even-skipped homeobox 2 
YEATS2                0.022   YEATS domain containing 2 
WIPF1                 0.022   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.022   WAS/WASL interacting protein family, member 1 
CAPNS1                0.021   calpain, small subunit 1 
CAPNS1                0.021   calpain, small subunit 1 
FAM98B                0.021   family with sequence similarity 98, member B isofor...
PURA                  0.021   purine-rich element binding protein A 
ZIC2                  0.021   zinc finger protein of the cerebellum 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press