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Search of human proteins with 58293779
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58293779 hypothetical protein LOC196541 [Homo sapiens]
(264 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58293779 hypothetical protein LOC196541 [Homo sapiens] 538 e-153
gi|188528686 hypothetical protein LOC151194 [Homo sapiens] 95 5e-20
gi|188528684 hypothetical protein LOC151194 [Homo sapiens] 95 5e-20
gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens] 87 2e-17
gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens] 69 4e-12
gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens] 69 4e-12
gi|94536786 hypothetical protein LOC79091 [Homo sapiens] 53 3e-07
gi|126012513 hypothetical protein LOC124512 [Homo sapiens] 52 5e-07
gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens] 49 4e-06
gi|209529731 hypothetical protein LOC254013 [Homo sapiens] 42 5e-04
gi|209529729 hypothetical protein LOC254013 [Homo sapiens] 42 5e-04
gi|28603834 hypothetical protein LOC254013 [Homo sapiens] 42 5e-04
gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens] 40 0.002
gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo sap... 40 0.002
gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens] 40 0.003
gi|134133220 hypothetical protein LOC85002 [Homo sapiens] 38 0.008
gi|212549593 hypothetical protein LOC653333 [Homo sapiens] 38 0.010
gi|221316599 chromogranin B precursor [Homo sapiens] 35 0.051
gi|15553097 hypothetical protein MGC9084 [Homo sapiens] 35 0.051
gi|26051235 nucleoporin 133kDa [Homo sapiens] 34 0.15
gi|118600965 hexaprenyldihydroxybenzoate methyltransferase [Homo... 33 0.26
gi|4757980 beta chimerin isoform 2 [Homo sapiens] 30 2.2
gi|91106928 beta chimerin isoform 1 [Homo sapiens] 30 2.2
gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens] 30 2.2
gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens] 30 2.2
gi|40316939 5-aminolevulinate synthase 1 [Homo sapiens] 30 2.8
gi|4502025 5-aminolevulinate synthase 1 [Homo sapiens] 30 2.8
gi|169216028 PREDICTED: hypothetical protein [Homo sapiens] 29 3.7
gi|169215823 PREDICTED: hypothetical protein [Homo sapiens] 29 3.7
gi|169215622 PREDICTED: hypothetical protein [Homo sapiens] 29 3.7
>gi|58293779 hypothetical protein LOC196541 [Homo sapiens]
Length = 264
Score = 538 bits (1386), Expect = e-153
Identities = 264/264 (100%), Positives = 264/264 (100%)
Query: 1 MDVCLSSAQQPGRRGEGLSSPGGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVP 60
MDVCLSSAQQPGRRGEGLSSPGGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVP
Sbjct: 1 MDVCLSSAQQPGRRGEGLSSPGGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVP 60
Query: 61 TDYASYTQEHYRFAGKEIVIQESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIG 120
TDYASYTQEHYRFAGKEIVIQESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIG
Sbjct: 61 TDYASYTQEHYRFAGKEIVIQESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIG 120
Query: 121 AGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNF 180
AGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNF
Sbjct: 121 AGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNF 180
Query: 181 PKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQV 240
PKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQV
Sbjct: 181 PKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQV 240
Query: 241 FDTTLLAEYPESSVKLFKGILKWD 264
FDTTLLAEYPESSVKLFKGILKWD
Sbjct: 241 FDTTLLAEYPESSVKLFKGILKWD 264
>gi|188528686 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 95.1 bits (235), Expect = 5e-20
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 71 YRFAGKEIVIQESIESYG--AVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSI 128
+ FA I I++ G AVVW A+ L YLE A EL + A +E+GAG GLV I
Sbjct: 24 FSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSA--VELGAGTGLVGI 81
Query: 129 VASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYD 188
VA++LGA VT TD L L+ N+ N VKEL WG++L P +D
Sbjct: 82 VAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGE---FD 138
Query: 189 YVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAE 248
+L +D++Y LL T+ +L +V+L A + R+ D FL ++ F +
Sbjct: 139 LILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHY 198
Query: 249 YPESSVKLFK 258
PE V +++
Sbjct: 199 DPEKDVHIYE 208
>gi|188528684 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 95.1 bits (235), Expect = 5e-20
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 71 YRFAGKEIVIQESIESYG--AVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSI 128
+ FA I I++ G AVVW A+ L YLE A EL + A +E+GAG GLV I
Sbjct: 24 FSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSA--VELGAGTGLVGI 81
Query: 129 VASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYD 188
VA++LGA VT TD L L+ N+ N VKEL WG++L P +D
Sbjct: 82 VAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGE---FD 138
Query: 189 YVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAE 248
+L +D++Y LL T+ +L +V+L A + R+ D FL ++ F +
Sbjct: 139 LILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHY 198
Query: 249 YPESSVKLFK 258
PE V +++
Sbjct: 199 DPEKDVHIYE 208
>gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens]
Length = 226
Score = 86.7 bits (213), Expect = 2e-17
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 65 SYTQE-HYRFAGKEIVIQESIES---YGAVVWPGAMALCQYLEEHAEELNFQDAKILEIG 120
SY+++ + F G + I ++ S A VW A++LC Y E ++ ++F+ K++E+G
Sbjct: 26 SYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFE--SQNVDFRGKKVIELG 83
Query: 121 AGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNF 180
AG G+V I+A++ G VT TDLP L +Q N+ N +V+ L WG D F
Sbjct: 84 AGTGIVGILAALQGGDVTITDLPLALEQIQGNVQANV--PAGGQAQVRALSWGID-HHVF 140
Query: 181 PKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFR--FSTDYEFLDKFK 238
P + YD VL +D+VY LL T+ +L +P + A+K R T+ F
Sbjct: 141 PAN---YDLVLGADIVYLEPTFPLLLGTLQHLCRPHGTIYLASKMRKEHGTESFFQHLLP 197
Query: 239 QVFDTTLLAEYPESSVKLFK 258
Q F L + +V +++
Sbjct: 198 QHFQLELAQRDEDENVNIYR 217
>gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens]
Length = 194
Score = 68.9 bits (167), Expect = 4e-12
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 13/139 (9%)
Query: 81 QESIESYGAVVWPGAMALCQYLE------EHAEELNFQDAKILEIGAGPGLVSIVASILG 134
Q S G VVW A+ L +YLE + A L+ + +LE+G+G G V ++A+ LG
Sbjct: 32 QYSSGGVGCVVWDAAIVLSKYLETPEFSGDGAHALSRRS--VLELGSGTGAVGLMAATLG 89
Query: 135 AQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASD 194
A V TDL ++ L+ N+ N T + + K L WGE+++ FP D++L +D
Sbjct: 90 ADVVVTDLEELQDLLKMNINMNKHLVTGSV-QAKVLKWGEEIE-GFPSPP---DFILMAD 144
Query: 195 VVYHHYFLDKLLTTMVYLS 213
+Y+ L+ LL T+ +S
Sbjct: 145 CIYYEESLEPLLKTLKDIS 163
>gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens]
Length = 229
Score = 68.9 bits (167), Expect = 4e-12
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 13/139 (9%)
Query: 81 QESIESYGAVVWPGAMALCQYLE------EHAEELNFQDAKILEIGAGPGLVSIVASILG 134
Q S G VVW A+ L +YLE + A L+ + +LE+G+G G V ++A+ LG
Sbjct: 32 QYSSGGVGCVVWDAAIVLSKYLETPEFSGDGAHALSRRS--VLELGSGTGAVGLMAATLG 89
Query: 135 AQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASD 194
A V TDL ++ L+ N+ N T + + K L WGE+++ FP D++L +D
Sbjct: 90 ADVVVTDLEELQDLLKMNINMNKHLVTGSV-QAKVLKWGEEIE-GFPSPP---DFILMAD 144
Query: 195 VVYHHYFLDKLLTTMVYLS 213
+Y+ L+ LL T+ +S
Sbjct: 145 CIYYEESLEPLLKTLKDIS 163
>gi|94536786 hypothetical protein LOC79091 [Homo sapiens]
Length = 404
Score = 52.8 bits (125), Expect = 3e-07
Identities = 46/138 (33%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 84 IESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATDL- 142
+E G VW GA+ L Y+ + F+ LE+GAG GL SI+A+ + V TD+
Sbjct: 179 LEDVGKQVWRGALLLADYILFRQDL--FRGCTALELGAGTGLASIIAATMARTVYCTDVG 236
Query: 143 PDVLGNLQYNLLKNT-LQCT-AHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYH-- 198
D+L Q N+ N+ L T + VKEL W +D PK F + SD+ H
Sbjct: 237 ADLLSMCQRNIALNSHLAATGGGIVRVKELDWLKDDLCTDPKVPFSWSQEEISDLYDHTT 296
Query: 199 -----HYFLDKLLTTMVY 211
F D LT V+
Sbjct: 297 ILFAAEVFYDDDLTDAVF 314
>gi|126012513 hypothetical protein LOC124512 [Homo sapiens]
Length = 190
Score = 52.0 bits (123), Expect = 5e-07
Identities = 50/139 (35%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 91 VWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATD---LPDVLG 147
VWP A+ L QYL H L ILEIGAG L I+A+ GA+V +D LP L
Sbjct: 3 VWPCAVVLAQYLWFHRRSL--PGKAILEIGAGVSLPGILAAKCGAEVILSDSSELPHCLE 60
Query: 148 NLQYNLLKNTLQCTAHLPEVKELVWGE---DLDKNFPKSAFYYDYVLASDVVYHHYFLDK 204
+ + N L HL +V L WG DL P+ D +LASDV + +
Sbjct: 61 VCRQSCQMNNL---PHL-QVVGLTWGHISWDLLALPPQ-----DIILASDVFFEPEDFED 111
Query: 205 LLTTMVYLSQPG-TVLLWA 222
+L T+ +L V LW+
Sbjct: 112 ILATIYFLMHKNPKVQLWS 130
>gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens]
Length = 149
Score = 48.9 bits (115), Expect = 4e-06
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 65 SYTQE-HYRFAGKEIVIQESIES---YGAVVWPGAMALCQYLEEHAEELNFQDAKILEIG 120
SY+++ + F G + I ++ S A VW A++LC Y E ++ ++F+ K++E+G
Sbjct: 26 SYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFE--SQNVDFRGKKVIELG 83
Query: 121 AGPGLVSIVASILGA 135
AG G+V I+A++ GA
Sbjct: 84 AGTGIVGILAALQGA 98
>gi|209529731 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 42.0 bits (97), Expect = 5e-04
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 85 ESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGA-QVTATDLP 143
+ Y A+ WPG AL +YL ++ + + + +L++G+G G +I A + GA ++ A D+
Sbjct: 90 DPYWAIYWPGGQALSRYLLDNPDVV--RGKSVLDLGSGCGATAIAAKMSGASRILANDID 147
Query: 144 DVLGNLQYNLLKNTLQCTAH----LPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHH 199
+ G + TL C + P + + + + DK +D V+ D+ Y
Sbjct: 148 PIAG------MAITLNCELNRLNPFPILIQNILNLEQDK--------WDLVVLGDMFYDE 193
Query: 200 YFLDKL 205
D L
Sbjct: 194 DLADSL 199
>gi|209529729 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 42.0 bits (97), Expect = 5e-04
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 85 ESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGA-QVTATDLP 143
+ Y A+ WPG AL +YL ++ + + + +L++G+G G +I A + GA ++ A D+
Sbjct: 90 DPYWAIYWPGGQALSRYLLDNPDVV--RGKSVLDLGSGCGATAIAAKMSGASRILANDID 147
Query: 144 DVLGNLQYNLLKNTLQCTAH----LPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHH 199
+ G + TL C + P + + + + DK +D V+ D+ Y
Sbjct: 148 PIAG------MAITLNCELNRLNPFPILIQNILNLEQDK--------WDLVVLGDMFYDE 193
Query: 200 YFLDKL 205
D L
Sbjct: 194 DLADSL 199
>gi|28603834 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 42.0 bits (97), Expect = 5e-04
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 85 ESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGA-QVTATDLP 143
+ Y A+ WPG AL +YL ++ + + + +L++G+G G +I A + GA ++ A D+
Sbjct: 90 DPYWAIYWPGGQALSRYLLDNPDVV--RGKSVLDLGSGCGATAIAAKMSGASRILANDID 147
Query: 144 DVLGNLQYNLLKNTLQCTAH----LPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHH 199
+ G + TL C + P + + + + DK +D V+ D+ Y
Sbjct: 148 PIAG------MAITLNCELNRLNPFPILIQNILNLEQDK--------WDLVVLGDMFYDE 193
Query: 200 YFLDKL 205
D L
Sbjct: 194 DLADSL 199
>gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens]
Length = 330
Score = 40.4 bits (93), Expect = 0.002
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 23/150 (15%)
Query: 67 TQEHYRF---AGKEIVIQES--IESYGA---VVWPGAMALCQYLEEHAEELNFQDAKILE 118
TQ H + +G + + ES I SYG V W A+ L ++ E+ F + +LE
Sbjct: 106 TQGHRSYLLPSGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPAV--FTNRTVLE 163
Query: 119 IGAGPGLVSIVASIL---GAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPE--------V 167
+G+G GL + + A + + VL L+ N+L N L A + V
Sbjct: 164 LGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTV 223
Query: 168 KELVWGEDLDKNFPKSAFYYDYVLASDVVY 197
+L W D+ SAF D V+A+DV+Y
Sbjct: 224 AQLDW--DVATVHQLSAFQPDVVIAADVLY 251
>gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
Length = 329
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 88 GAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASIL---GAQVTATDLPD 144
G V W A+ L ++ E+ F + +LE+G+G GL + + A + +
Sbjct: 135 GRVTWDTALYLVEWAIENPAA--FINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSR 192
Query: 145 VLGNLQYNLLKNTLQCTAHLP-------EVKELVWGEDLDKNFPKSAFYYDYVLASDVVY 197
VL LQ N+L N L A + V +L W D+ SAF+ D V+A+DV+Y
Sbjct: 193 VLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDW--DVATVHQLSAFHPDVVIAADVLY 250
>gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens]
Length = 296
Score = 39.7 bits (91), Expect = 0.003
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 74 AGKEIVIQES--IESYGA---VVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSI 128
+G + + ES I SYG V W A+ L ++ E+ F + +LE+G+G GL +
Sbjct: 82 SGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPAV--FTNRTVLELGSGAGLTGL 139
Query: 129 VASIL---GAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPE--------VKELVWGEDLD 177
+ A + + VL L+ N+L N L A + V +L W D+
Sbjct: 140 AICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDW--DVA 197
Query: 178 KNFPKSAFYYDYVLASDVVY 197
SAF D V+A+DV+Y
Sbjct: 198 TVHQLSAFQPDVVIAADVLY 217
>gi|134133220 hypothetical protein LOC85002 [Homo sapiens]
Length = 296
Score = 38.1 bits (87), Expect = 0.008
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 88 GAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASIL---GAQVTATDLPD 144
G V W A+ L ++ E+ F + +LE+G+G GL + + A + +
Sbjct: 101 GLVTWDAALYLAEWAIENPAA--FINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSR 158
Query: 145 VLGNLQYNLLKNTLQCTAHLP--------EVKELVWGEDLDKNFPKSAFYYDYVLASDVV 196
VL L+ N+L N L A + V +L W D+ SAF D V+A+DV+
Sbjct: 159 VLEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDW--DVAMVHQLSAFQPDVVIAADVL 216
Query: 197 Y 197
Y
Sbjct: 217 Y 217
>gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
Length = 330
Score = 37.7 bits (86), Expect = 0.010
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 88 GAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASIL---GAQVTATDLPD 144
G V W A+ L ++ E+ F + +LE+G+G GL + + A + +
Sbjct: 135 GLVTWDAALYLAEWAIENPAA--FINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSR 192
Query: 145 VLGNLQYNLLKNTLQCTAHLP--------EVKELVWGEDLDKNFPKSAFYYDYVLASDVV 196
+L L+ N+L N L A + V +L W D+ SAF D V+A+DV+
Sbjct: 193 ILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDW--DVAMVHQLSAFQPDVVIAADVL 250
Query: 197 Y 197
Y
Sbjct: 251 Y 251
>gi|221316599 chromogranin B precursor [Homo sapiens]
Length = 677
Score = 35.4 bits (80), Expect = 0.051
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 12 GRRGEGLSSPGGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVPTDYASYTQEHY 71
GR SS GG L +E+KG PQ++S EESN SL + + HY
Sbjct: 286 GRSRPDRSSQGGSLPSEEKGHPQEES-----EESNVSMASL--------GEKRDHHSTHY 332
Query: 72 RFAGKEIVIQESIESYGAVVWPGAMALCQYLEEHAEE 108
R + +E E I+ Y V P + +Y +EE
Sbjct: 333 RASEEEPEYGEEIKGYPGVQAPEDLEWERYRGRGSEE 369
>gi|15553097 hypothetical protein MGC9084 [Homo sapiens]
Length = 372
Score = 35.4 bits (80), Expect = 0.051
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 33/190 (17%)
Query: 88 GAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQ----------- 136
G +W L Y + ++ F K+L++G G GL+ I A G++
Sbjct: 165 GLKIWECTFDLLAYFTK--AKVKFAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMV 222
Query: 137 VTATDLPDVLGNLQYNLLKNTLQ----CTAHLPEVKELV--------WGE--DLDKNFPK 182
+ LP+V+ N +N + P+V +L W E L + K
Sbjct: 223 IDEVTLPNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEK 282
Query: 183 SAFYYDYVLASDVVYH-HYFLDKLLTTMVYLSQPGTVLL--WANKFRFSTDYEFLDKF-- 237
YD +L S+ +Y+ Y+ + T + LS+ G VLL A+ F KF
Sbjct: 283 LFVKYDLILTSETIYNPDYYSNLHQTFLRLLSKNGRVLLASKAHYFGVGGGVHLFQKFVE 342
Query: 238 -KQVFDTTLL 246
+ VF T +L
Sbjct: 343 ERDVFKTRIL 352
>gi|26051235 nucleoporin 133kDa [Homo sapiens]
Length = 1156
Score = 33.9 bits (76), Expect = 0.15
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 95 AMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLL 154
A+ L +Y++E E++N D K+ + + +S + + LL
Sbjct: 1051 ALDLLEYIDEE-EDININDLKLEILCKALQRDNWSSSDGKDDPIEVSKDSIFVKILQKLL 1109
Query: 155 KNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYH 198
K+ +Q + +LPEVK+L+ + L KS Y+++VL ++ Y+
Sbjct: 1110 KDGIQLSEYLPEVKDLLQADQLGS--LKSNPYFEFVLKANYEYY 1151
>gi|118600965 hexaprenyldihydroxybenzoate methyltransferase [Homo
sapiens]
Length = 369
Score = 33.1 bits (74), Expect = 0.26
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 115 KILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEV--KELVW 172
KIL++G G GL++ LGA V D D N++ T QC V K + +
Sbjct: 149 KILDVGCGGGLLTEPLGRLGASVIGIDPVD--ENIK------TAQCHKSFDPVLDKRIEY 200
Query: 173 GE-DLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPG 216
L++ ++A +D V+AS+VV H L+ L + +PG
Sbjct: 201 RVCSLEEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPG 245
>gi|4757980 beta chimerin isoform 2 [Homo sapiens]
Length = 468
Score = 30.0 bits (66), Expect = 2.2
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 17/143 (11%)
Query: 1 MDVCLSSAQQPGRRGEGLSSPGGWLE-------AEKKGAPQKDSTGGVLEESNKIEPSLH 53
+D+C+ + G + EGL G+ E A + + D + V + N I +L
Sbjct: 294 VDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALK 353
Query: 54 SLQKFVPTDYASY-TQEHYRFAGKEIVIQESIESYGAVVW---PGAMALCQYLEEHAEEL 109
+ +P +Y T + A K E +E+ V+ P +YL H +++
Sbjct: 354 LYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKV 413
Query: 110 ------NFQDAKILEIGAGPGLV 126
NF +A+ L I GP L+
Sbjct: 414 TMNEKDNFMNAENLGIVFGPTLM 436
>gi|91106928 beta chimerin isoform 1 [Homo sapiens]
Length = 332
Score = 30.0 bits (66), Expect = 2.2
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 17/143 (11%)
Query: 1 MDVCLSSAQQPGRRGEGLSSPGGWLE-------AEKKGAPQKDSTGGVLEESNKIEPSLH 53
+D+C+ + G + EGL G+ E A + + D + V + N I +L
Sbjct: 158 VDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALK 217
Query: 54 SLQKFVPTDYASY-TQEHYRFAGKEIVIQESIESYGAVVW---PGAMALCQYLEEHAEEL 109
+ +P +Y T + A K E +E+ V+ P +YL H +++
Sbjct: 218 LYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKV 277
Query: 110 ------NFQDAKILEIGAGPGLV 126
NF +A+ L I GP L+
Sbjct: 278 TMNEKDNFMNAENLGIVFGPTLM 300
>gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]
Length = 621
Score = 30.0 bits (66), Expect = 2.2
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 26 EAEKKGAPQKDSTGGVLEESNKIEP-----SLHSLQKFVPTDYASYTQEHYRFAGKEIVI 80
E G+ + S GG+ + P SL SL+ F + E G E +
Sbjct: 142 ELTAAGSEEPSSAGGLSSSCSDPSPPGESPSLDSLESFSNLHSFPSSCEFNSEEGAENRV 201
Query: 81 QESIESYGAVVWPGAMALCQYLEEHAEE 108
E E GA V PGA+ LC+ EE EE
Sbjct: 202 PE--EEEGAAVLPGAVPLCK--EEEGEE 225
>gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]
Length = 620
Score = 30.0 bits (66), Expect = 2.2
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 26 EAEKKGAPQKDSTGGVLEESNKIEP-----SLHSLQKFVPTDYASYTQEHYRFAGKEIVI 80
E G+ + S GG+ + P SL SL+ F + E G E +
Sbjct: 142 ELTAAGSEEPSSAGGLSSSCSDPSPPGESPSLDSLESFSNLHSFPSSCEFNSEEGAENRV 201
Query: 81 QESIESYGAVVWPGAMALCQYLEEHAEE 108
E E GA V PGA+ LC+ EE EE
Sbjct: 202 PE--EEEGAAVLPGAVPLCK--EEEGEE 225
>gi|40316939 5-aminolevulinate synthase 1 [Homo sapiens]
Length = 640
Score = 29.6 bits (65), Expect = 2.8
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 102 LEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCT 161
L+E +E+N ++ E AGP +VS+ + D +L N Q + K +
Sbjct: 130 LQEDVQEMNAVRKEVAETSAGPSVVSV-------KTDGGDPSGLLKNFQDIMQKQRPERV 182
Query: 162 AHLPEVKELVWGEDLDKNFPKSAFYYDY 189
+HL L N PKS + Y
Sbjct: 183 SHL-----------LQDNLPKSVSTFQY 199
>gi|4502025 5-aminolevulinate synthase 1 [Homo sapiens]
Length = 640
Score = 29.6 bits (65), Expect = 2.8
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 102 LEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCT 161
L+E +E+N ++ E AGP +VS+ + D +L N Q + K +
Sbjct: 130 LQEDVQEMNAVRKEVAETSAGPSVVSV-------KTDGGDPSGLLKNFQDIMQKQRPERV 182
Query: 162 AHLPEVKELVWGEDLDKNFPKSAFYYDY 189
+HL L N PKS + Y
Sbjct: 183 SHL-----------LQDNLPKSVSTFQY 199
>gi|169216028 PREDICTED: hypothetical protein [Homo sapiens]
Length = 104
Score = 29.3 bits (64), Expect = 3.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 8 AQQPGRRGEGLSSPGGWLEAEKKGAPQ 34
A+ PGRRGE PG L ++ GAP+
Sbjct: 75 ARGPGRRGEAPQQPGFSLAGQRLGAPR 101
>gi|169215823 PREDICTED: hypothetical protein [Homo sapiens]
Length = 104
Score = 29.3 bits (64), Expect = 3.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 8 AQQPGRRGEGLSSPGGWLEAEKKGAPQ 34
A+ PGRRGE PG L ++ GAP+
Sbjct: 75 ARGPGRRGEAPQQPGFSLAGQRLGAPR 101
>gi|169215622 PREDICTED: hypothetical protein [Homo sapiens]
Length = 104
Score = 29.3 bits (64), Expect = 3.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 8 AQQPGRRGEGLSSPGGWLEAEKKGAPQ 34
A+ PGRRGE PG L ++ GAP+
Sbjct: 75 ARGPGRRGEAPQQPGFSLAGQRLGAPR 101
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,748,069
Number of Sequences: 37866
Number of extensions: 483726
Number of successful extensions: 1318
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1287
Number of HSP's gapped (non-prelim): 38
length of query: 264
length of database: 18,247,518
effective HSP length: 100
effective length of query: 164
effective length of database: 14,460,918
effective search space: 2371590552
effective search space used: 2371590552
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.