Guide to the Human Genome
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Name: COQ3 Sequence: fasta or formatted (369aa) NCBI GI: 118600965
Description:

hexaprenyldihydroxybenzoate methyltransferase

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         22           2
 C cysteine            2.4          9           3
 D aspartate           3.0         11           1
 E glutamate           7.0         26           2
 F phenylalanine       4.1         15           1
 G glycine             7.6         28           3
 H histidine           2.4          9           1
 I isoleucine          5.4         20           1
 K lysine              6.2         23           2
 L leucine            10.0         37           2
 M methionine          1.1          4           1
 N asparagine          4.1         15           1
 P proline             4.9         18           1
 Q glutamine           3.5         13           1
 R arginine            3.8         14           1
 S serine              8.1         30           2
 T threonine           6.5         24           2
 V valine              8.1         30           2
 W tryptophan          2.4          9           2
 Y tyrosine            3.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hexaprenyldihydroxybenzoate methyltransferase [Homo... 
METTL2B               0.016   methyltransferase like 2B 
METTL2A               0.016   methyltransferase like 2A 
GNMT                  0.015   glycine N-methyltransferase 
RNMT                  0.014   RNA (guanine-7-) methyltransferase 
METTL7A               0.014   methyltransferase like 7A 
AS3MT                 0.012   arsenic (+3 oxidation state) methyltransferase [Hom...
WBSCR27               0.012   Williams-Beuren syndrome chromosome region 27 
PRMT3                 0.011   protein arginine methyltransferase 3 isoform 3 [Hom...
PRMT3                 0.011   protein arginine methyltransferase 3 isoform 2 [Hom...
PRMT3                 0.011   protein arginine methyltransferase 3 isoform 1 [Homo...
C13orf39              0.011   hypothetical protein LOC196541 
C20orf7               0.008   hypothetical protein LOC79133 isoform 1 
PCMT1                 0.008   protein-L-isoaspartate (D-aspartate) O-methyltransf...
LOC100291232          0.007   PREDICTED: hypothetical protein XP_002347841 
METTL13               0.007   CGI-01 protein isoform 1 
PRMT6                 0.007   protein arginine methyltransferase 6 
VPS13B                0.007   vacuolar protein sorting 13B isoform 5 
VPS13B                0.007   vacuolar protein sorting 13B isoform 1 
CARM1                 0.005   coactivator-associated arginine methyltransferase 1 ...
MRC2                  0.005   mannose receptor, C type 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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