Guide to the Human Genome
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Name: CHN2 Sequence: fasta or formatted (332aa) NCBI GI: 91106928
Description:

beta chimerin isoform 1

Referenced in:

Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [468aa] beta chimerin isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         20           2
 C cysteine            3.3         11           2
 D aspartate           5.7         19           1
 E glutamate           6.6         22           2
 F phenylalanine       4.5         15           1
 G glycine             4.8         16           2
 H histidine           3.9         13           1
 I isoleucine          6.0         20           2
 K lysine              7.8         26           2
 L leucine             9.9         33           2
 M methionine          3.0         10           1
 N asparagine          5.1         17           1
 P proline             4.2         14           2
 Q glutamine           2.7          9           1
 R arginine            5.4         18           2
 S serine              3.9         13           2
 T threonine           4.8         16           2
 V valine              7.5         25           2
 W tryptophan          1.2          4           1
 Y tyrosine            3.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta chimerin isoform 1 
CHN2                  0.831   beta chimerin isoform 2 
CHN1                  0.648   chimerin (chimaerin) 1 isoform a 
CHN1                  0.606   chimerin (chimaerin) 1 isoform b 
ARHGAP21              0.162   Rho GTPase activating protein 21 
ARHGAP27              0.162   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.162   Rho GTPase activating protein 27 isoform a 
GMIP                  0.162   GEM interacting protein 
ARHGAP23              0.159   Rho GTPase activating protein 23 
ARHGAP15              0.159   ARHGAP15 
SNX26                 0.159   sorting nexin 26 
ARHGAP10              0.159   Rho GTPase activating protein 10 
MYO9B                 0.157   myosin IXB isoform 2 
MYO9B                 0.157   myosin IXB isoform 1 
ARHGAP12              0.156   Rho GTPase activating protein 12 
MYO9A                 0.156   myosin IXA 
ARHGAP26              0.156   GTPase regulator associated with the focal adhesion...
ARHGAP26              0.156   GTPase regulator associated with the focal adhesion k...
HMHA1                 0.154   minor histocompatibility antigen HA-1 
GRLF1                 0.153   glucocorticoid receptor DNA binding factor 1 
OPHN1                 0.148   oligophrenin 1 
ARHGAP5               0.147   Rho GTPase activating protein 5 isoform a 
ARHGAP5               0.147   Rho GTPase activating protein 5 isoform b 
ARHGAP29              0.144   PTPL1-associated RhoGAP 1 
RICS                  0.144   Rho GTPase-activating protein isoform 1 
RICS                  0.144   Rho GTPase-activating protein isoform 2 
ARHGAP9               0.142   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.142   Rho GTPase activating protein 9 isoform 3 
CDGAP                 0.140   Cdc42 GTPase-activating protein 
BCR                   0.139   breakpoint cluster region isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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