TMED2 33510

Name: TMED2	Sequence: fasta or formatted (201aa)		NCBI GI: 5803149
Description: coated vesicle membrane protein		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 17 2 C cysteine 1.0 2 1 D aspartate 4.5 9 1 E glutamate 10.0 20 2 F phenylalanine 6.5 13 2 G glycine 6.5 13 2 H histidine 2.5 5 1 I isoleucine 6.0 12 1 K lysine 5.0 10 1 L leucine 8.0 16 2 M methionine 5.5 11 1 N asparagine 3.5 7 1 P proline 1.5 3 1 Q glutamine 2.0 4 1 R arginine 5.0 10 2 S serine 4.5 9 2 T threonine 7.0 14 1 V valine 9.0 18 2 W tryptophan 0.5 1 1 Y tyrosine 3.5 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coated vesicle membrane protein TMED7 0.262 transmembrane emp24 protein transport domain contain... TMED3 0.203 transmembrane emp24 domain containing 3 TMED5 0.163 transmembrane emp24 protein transport domain contain... TMED9 0.158 transmembrane emp24 protein transport domain contain... TMED4 0.152 transmembrane emp24 protein transport domain contain... TMED1 0.134 interleukin 1 receptor-like 1 ligand precursor TMED10 0.110 transmembrane emp24 domain-containing protein 10 pre... TMED6 0.021 transmembrane emp24 protein transport domain contain... ABCC11 0.021 ATP-binding cassette, sub-family C, member 11 isofor... ABCC11 0.021 ATP-binding cassette, sub-family C, member 11 isofor... ABCC11 0.021 ATP-binding cassette, sub-family C, member 11 isofor... ALCAM 0.019 activated leukocyte cell adhesion molecule GRPEL2 0.016 GrpE-like 2, mitochondrial CEP78 0.013 centrosomal protein 78kDa isoform a CEP78 0.013 centrosomal protein 78kDa isoform b RRBP1 0.011 ribosome binding protein 1 RRBP1 0.011 ribosome binding protein 1 HDAC9 0.011 histone deacetylase 9 isoform 3 HDAC9 0.011 histone deacetylase 9 isoform 2 HDAC9 0.011 histone deacetylase 9 isoform 1 HDAC9 0.011 histone deacetylase 9 isoform 4 DDX23 0.008 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 MICALCL 0.008 MICAL C-terminal like LOC730032 0.005 PREDICTED: similar to Rho guanine nucleotide exchan... PHF20L1 0.005 PHD finger protein 20-like 1 isoform 2 PHF20L1 0.005 PHD finger protein 20-like 1 isoform 1 ARHGEF4 0.005 Rho guanine nucleotide exchange factor 4 isoform a [... ARHGEF4 0.005 Rho guanine nucleotide exchange factor 4 isoform b [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.