Guide to the Human Genome
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Name: GRPEL2 Sequence: fasta or formatted (225aa) NCBI GI: 40255109
Description:

GrpE-like 2, mitochondrial

Referenced in:

Heat-Shock Proteins and Chaperonins
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         20           2
 C cysteine            2.7          6           1
 D aspartate           5.3         12           1
 E glutamate          10.2         23           2
 F phenylalanine       2.2          5           1
 G glycine             5.8         13           1
 H histidine           2.2          5           1
 I isoleucine          4.0          9           1
 K lysine              6.7         15           1
 L leucine            11.6         26           4
 M methionine          0.4          1           1
 N asparagine          0.4          1           1
 P proline             4.9         11           2
 Q glutamine           4.4         10           1
 R arginine            9.3         21           3
 S serine              4.4         10           1
 T threonine           4.9         11           2
 V valine              8.4         19           1
 W tryptophan          1.8          4           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GrpE-like 2, mitochondrial 
GRPEL1                0.361   GrpE-like 1, mitochondrial 
MYH3                  0.021   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH2                  0.019   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.019   myosin, heavy chain 2, skeletal muscle, adult [Homo...
GOLGA2                0.016   Golgi autoantigen, golgin subfamily a, 2 
DIS3                  0.016   DIS3 mitotic control isoform b 
DMD                   0.014   dystrophin Dp427c isoform 
DMD                   0.014   dystrophin Dp260-2 isoform 
DMD                   0.014   dystrophin Dp260-1 isoform 
DMD                   0.014   dystrophin Dp427p2 isoform 
DMD                   0.014   dystrophin Dp427p1 isoform 
DMD                   0.014   dystrophin Dp427l isoform 
DMD                   0.014   dystrophin Dp427m isoform 
TMED2                 0.014   coated vesicle membrane protein 
AZI1                  0.014   5-azacytidine induced 1 isoform b 
AZI1                  0.014   5-azacytidine induced 1 isoform a 
CCDC88A               0.012   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.012   coiled-coil domain containing 88A isoform 1 
MYH1                  0.012   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH8                  0.012   myosin, heavy chain 8, skeletal muscle, perinatal [...
DIS3                  0.012   DIS3 mitotic control isoform a 
MYH4                  0.009   myosin, heavy polypeptide 4, skeletal muscle 
LOC100289289          0.009   PREDICTED: hypothetical protein XP_002343409 
AKAP5                 0.009   A-kinase anchor protein 5 
LOC645545             0.009   hypothetical protein LOC645545 
TPM3                  0.007   tropomyosin 3 isoform 2 
KIF21A                0.007   kinesin family member 21A 
FAM114A2              0.007   hypothetical protein LOC10827 
CCDC29                0.007   coiled-coil domain containing 29 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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