TMED6 13145

Name: TMED6	Sequence: fasta or formatted (240aa)		NCBI GI: 21389573
Description: transmembrane emp24 protein transport domain containing 6		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 12 2 C cysteine 1.7 4 1 D aspartate 4.6 11 1 E glutamate 3.3 8 1 F phenylalanine 7.9 19 2 G glycine 7.5 18 2 H histidine 3.3 8 1 I isoleucine 4.2 10 2 K lysine 3.8 9 2 L leucine 8.3 20 2 M methionine 2.5 6 1 N asparagine 5.8 14 2 P proline 3.8 9 2 Q glutamine 7.9 19 1 R arginine 5.0 12 1 S serine 6.2 15 1 T threonine 7.1 17 3 V valine 5.8 14 2 W tryptophan 1.7 4 2 Y tyrosine 4.6 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane emp24 protein transport domain contain... TMED1 0.073 interleukin 1 receptor-like 1 ligand precursor TMED5 0.071 transmembrane emp24 protein transport domain contain... TMED7 0.046 transmembrane emp24 protein transport domain contain... TMED4 0.046 transmembrane emp24 protein transport domain contain... TMED3 0.042 transmembrane emp24 domain containing 3 TMED9 0.040 transmembrane emp24 protein transport domain contain... KCTD18 0.017 potassium channel tetramerization domain containing ... TMED2 0.017 coated vesicle membrane protein MACF1 0.006 microfilament and actin filament cross-linker protei... ITPRIPL1 0.006 inositol 1,4,5-triphosphate receptor interacting pro... ITPRIPL1 0.006 inositol 1,4,5-triphosphate receptor interacting pro... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.