TMED4 26145

Name: TMED4	Sequence: fasta or formatted (227aa)		NCBI GI: 33457308
Description: transmembrane emp24 protein transport domain containing 4		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 15 2 C cysteine 1.3 3 1 D aspartate 4.0 9 1 E glutamate 7.5 17 2 F phenylalanine 4.0 9 2 G glycine 7.9 18 2 H histidine 3.5 8 1 I isoleucine 5.3 12 1 K lysine 5.3 12 2 L leucine 11.0 25 4 M methionine 3.1 7 1 N asparagine 2.2 5 2 P proline 3.1 7 1 Q glutamine 7.5 17 1 R arginine 7.0 16 1 S serine 4.4 10 1 T threonine 6.2 14 1 V valine 5.7 13 2 W tryptophan 1.8 4 2 Y tyrosine 2.6 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane emp24 protein transport domain contain... TMED9 0.761 transmembrane emp24 protein transport domain contain... TMED10 0.200 transmembrane emp24 domain-containing protein 10 pre... TMED7 0.133 transmembrane emp24 protein transport domain contain... TMED2 0.131 coated vesicle membrane protein TMED3 0.096 transmembrane emp24 domain containing 3 TMED1 0.050 interleukin 1 receptor-like 1 ligand precursor TMED6 0.050 transmembrane emp24 protein transport domain contain... TMED5 0.046 transmembrane emp24 protein transport domain contain... KIF16B 0.016 kinesin-like motor protein C20orf23 TPR 0.014 nuclear pore complex-associated protein TPR CEP97 0.014 centrosomal protein 97kDa GABPB1 0.011 GA binding protein transcription factor, beta subunit... GABPB1 0.011 GA binding protein transcription factor, beta subunit... TTN 0.009 titin isoform novex-3 TPM4 0.009 tropomyosin 4 isoform 2 HNRNPC 0.009 heterogeneous nuclear ribonucleoprotein C isoform b... HNRNPC 0.009 heterogeneous nuclear ribonucleoprotein C isoform a... HNRNPC 0.009 heterogeneous nuclear ribonucleoprotein C isoform b... HNRNPC 0.009 heterogeneous nuclear ribonucleoprotein C isoform a... LEKR1 0.009 leucine, glutamate and lysine rich 1 LOC440563 0.009 heterogeneous nuclear ribonucleoprotein C-like [Hom... LUC7L 0.009 LUC7-like isoform b LUC7L 0.009 LUC7-like isoform a HNRNPCL1 0.009 heterogeneous nuclear ribonucleoprotein C-like 1 [Ho... LUC7L2 0.007 LUC7-like 2 FLCN 0.007 folliculin isoform 1 CLTB 0.007 clathrin, light polypeptide isoform a C2orf77 0.007 hypothetical protein LOC129881 CCDC88C 0.007 DVL-binding protein DAPLE Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.