Guide to the Human Genome
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Name: LOC730032 Sequence: fasta or formatted (368aa) NCBI GI: 239753316
Description:

PREDICTED: similar to Rho guanine nucleotide exchange factor 4

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         38           4
 C cysteine            2.7         10           1
 D aspartate           2.7         10           2
 E glutamate           3.8         14           2
 F phenylalanine       0.8          3           1
 G glycine             9.8         36           2
 H histidine           3.5         13           1
 I isoleucine          2.4          9           2
 K lysine              4.1         15           2
 L leucine             8.2         30           2
 M methionine          1.4          5           1
 N asparagine          1.6          6           1
 P proline            12.2         45           4
 Q glutamine           3.8         14           2
 R arginine            6.0         22           2
 S serine             12.2         45           5
 T threonine           6.0         22           2
 V valine              4.6         17           2
 W tryptophan          3.5         13           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Rho guanine nucleotide exchan... 
ARHGEF4               0.377   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.377   Rho guanine nucleotide exchange factor 4 isoform b [...
FLJ22184              0.029   PREDICTED: hypothetical protein LOC80164 
PRDM2                 0.024   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.024   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.024   retinoblastoma protein-binding zinc finger protein i...
FOXC1                 0.024   forkhead box C1 
PRR12                 0.024   proline rich 12 
IRS2                  0.021   insulin receptor substrate 2 
FOXD2                 0.021   forkhead box D2 
C6orf174              0.020   hypothetical protein LOC387104 
FLJ22184              0.020   PREDICTED: hypothetical protein FLJ22184 
OTX1                  0.020   orthodenticle homeobox 1 
LOC100128074          0.020   PREDICTED: hypothetical protein 
HOXA3                 0.019   homeobox A3 isoform a 
HOXA3                 0.019   homeobox A3 isoform a 
OBSCN                 0.019   obscurin, cytoskeletal calmodulin and titin-interac...
LOC100288382          0.019   PREDICTED: hypothetical protein XP_002342213 
UBQLN4                0.019   ataxin-1 ubiquitin-like interacting protein 
CNOT3                 0.019   CCR4-NOT transcription complex, subunit 3 
TNRC18                0.019   trinucleotide repeat containing 18 
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
TOX2                  0.019   TOX high mobility group box family member 2 isoform...
TOX2                  0.019   TOX high mobility group box family member 2 isoform...
TOX2                  0.019   TOX high mobility group box family member 2 isoform...
TOX2                  0.019   TOX high mobility group box family member 2 isoform ...
DMKN                  0.019   dermokine isoform 5 precursor 
LOC100128074          0.017   PREDICTED: hypothetical protein 
TSEN54                0.017   tRNA splicing endonuclease 54 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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