TMED1 33486

Name: TMED1	Sequence: fasta or formatted (227aa)		NCBI GI: 5803040
Description: interleukin 1 receptor-like 1 ligand precursor		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 21 2 C cysteine 1.3 3 1 D aspartate 5.7 13 2 E glutamate 10.6 24 2 F phenylalanine 5.7 13 2 G glycine 6.2 14 2 H histidine 0.4 1 1 I isoleucine 3.1 7 1 K lysine 3.5 8 1 L leucine 12.3 28 3 M methionine 3.1 7 2 N asparagine 2.6 6 1 P proline 5.3 12 3 Q glutamine 4.4 10 1 R arginine 4.8 11 1 S serine 5.3 12 1 T threonine 4.8 11 1 V valine 8.8 20 1 W tryptophan 1.3 3 1 Y tyrosine 1.3 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interleukin 1 receptor-like 1 ligand precursor TMED5 0.509 transmembrane emp24 protein transport domain contain... TMED7 0.191 transmembrane emp24 protein transport domain contain... TMED3 0.177 transmembrane emp24 domain containing 3 TMED2 0.118 coated vesicle membrane protein TMED6 0.083 transmembrane emp24 protein transport domain contain... TMED4 0.052 transmembrane emp24 protein transport domain contain... TMED9 0.052 transmembrane emp24 protein transport domain contain... TMED10 0.047 transmembrane emp24 domain-containing protein 10 pre... CALCOCO1 0.017 coiled-coil transcriptional coactivator isoform 2 [... RGSL1 0.014 regulator of G-protein signaling like 1 PZP 0.012 pregnancy-zone protein MAP7D2 0.012 MAP7 domain containing 2 C18orf34 0.012 hypothetical protein LOC374864 isoform 1 C18orf34 0.012 hypothetical protein LOC374864 isoform 2 CENPH 0.009 centromere protein H ALOX15B 0.009 arachidonate 15-lipoxygenase, second type isoform a ... ALOX15B 0.009 arachidonate 15-lipoxygenase, second type isoform d ... FYCO1 0.007 FYVE and coiled-coil domain containing 1 SIN3A 0.007 transcriptional co-repressor Sin3A SIN3A 0.007 transcriptional co-repressor Sin3A SIN3A 0.007 transcriptional co-repressor Sin3A DNAH17 0.007 PREDICTED: dynein, axonemal, heavy chain 17 DNAH17 0.007 PREDICTED: dynein, axonemal, heavy chain 17 DNAH17 0.007 PREDICTED: dynein, axonemal, heavy chain 17 FAM184B 0.007 hypothetical protein LOC27146 MEGF6 0.007 EGF-like-domain, multiple 3 APOE 0.007 apolipoprotein E precursor SEC14L3 0.007 SEC14-like 3 CLIP1 0.007 restin isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.