PHF20L1 850

Name: PHF20L1	Sequence: fasta or formatted (1017aa)		NCBI GI: 111120331
Description: PHD finger protein 20-like 1 isoform 1		Referenced in: PHD Finger Proteins
Other entries for this name: alt prot [573aa] PHD finger protein 20-like 1 isoform 2 alt prot [285aa] PHD finger protein 20-like 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 58 7 C cysteine 2.3 23 2 D aspartate 6.9 70 4 E glutamate 8.8 90 3 F phenylalanine 2.6 26 2 G glycine 4.7 48 1 H histidine 2.5 25 2 I isoleucine 3.9 40 2 K lysine 10.0 102 9 L leucine 8.1 82 3 M methionine 1.9 19 1 N asparagine 3.9 40 2 P proline 6.4 65 2 Q glutamine 4.5 46 2 R arginine 4.9 50 4 S serine 10.2 104 3 T threonine 4.1 42 3 V valine 4.5 46 1 W tryptophan 1.4 14 1 Y tyrosine 2.7 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PHD finger protein 20-like 1 isoform 1 PHF20L1 0.527 PHD finger protein 20-like 1 isoform 2 PHF20L1 0.267 PHD finger protein 20-like 1 isoform 3 PHF20 0.254 PHD finger protein 20 MLL5 0.018 myeloid/lymphoid or mixed-lineage leukemia 5 MLL5 0.018 myeloid/lymphoid or mixed-lineage leukemia 5 ASH1L 0.018 absent, small, or homeotic 1-like TAF3 0.014 RNA polymerase II transcription factor TAFII140 [Ho... PHF13 0.014 PHD finger protein 13 SRRM1 0.014 serine/arginine repetitive matrix 1 LOC100133698 0.013 PREDICTED: hypothetical protein PPP1R12A 0.013 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.013 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.013 protein phosphatase 1, regulatory (inhibitor) subunit... SRRM2 0.012 splicing coactivator subunit SRm300 TCOF1 0.012 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.012 Treacher Collins-Franceschetti syndrome 1 isoform e... NEFH 0.012 neurofilament, heavy polypeptide 200kDa AFF4 0.011 ALL1 fused gene from 5q31 TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform a ... BOD1L 0.010 biorientation of chromosomes in cell division 1-like... PHF23 0.010 PHD finger protein 23 SFRS18 0.010 splicing factor, arginine/serine-rich 130 SFRS18 0.010 splicing factor, arginine/serine-rich 130 LOC100133599 0.009 PREDICTED: hypothetical protein NOLC1 0.009 nucleolar and coiled-body phosphoprotein 1 SYTL2 0.009 synaptotagmin-like 2 isoform a SYTL2 0.009 synaptotagmin-like 2 isoform g Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.