Guide to the Human Genome
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Search of human proteins with 5730027

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5730027 KH domain containing, RNA binding, signal
transduction associated 1 [Homo sapiens]
         (443 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5730027 KH domain containing, RNA binding, signal transductio...   920   0.0  
gi|189217895 KH domain-containing, RNA-binding, signal transduct...   429   e-120
gi|5730073 KH domain containing, RNA binding, signal transductio...   375   e-104
gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7...   134   2e-31
gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7...   134   2e-31
gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6...   134   2e-31
gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5...   134   2e-31
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]                 67   3e-11
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]                 67   3e-11
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]                 67   3e-11
gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a ...    55   1e-07
gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b ...    55   1e-07
gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a ...    55   1e-07
gi|55741675 hypothetical protein LOC22889 [Homo sapiens]               53   5e-07
gi|153252068 testes-specific heterogenous nuclear ribonucleoprot...    50   4e-06
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     50   5e-06
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     50   5e-06
gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo sa...    49   7e-06
gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo sap...    49   7e-06
gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]         49   1e-05
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]          48   2e-05
gi|160707881 formin 2 [Homo sapiens]                                   48   2e-05
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho...    48   2e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     47   3e-05
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]                     47   5e-05
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]                     47   5e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap...    46   6e-05
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]          45   1e-04
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             45   2e-04
gi|147902746 MEX3A protein [Homo sapiens]                              45   2e-04

>gi|5730027 KH domain containing, RNA binding, signal transduction
           associated 1 [Homo sapiens]
          Length = 443

 Score =  920 bits (2377), Expect = 0.0
 Identities = 443/443 (100%), Positives = 443/443 (100%)

Query: 1   MQRRDDPAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPA 60
           MQRRDDPAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPA
Sbjct: 1   MQRRDDPAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPA 60

Query: 61  TQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEKDSLDPSFTH 120
           TQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEKDSLDPSFTH
Sbjct: 61  TQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEKDSLDPSFTH 120

Query: 121 AMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQ 180
           AMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQ
Sbjct: 121 AMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQ 180

Query: 181 GNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEA 240
           GNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEA
Sbjct: 181 GNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEA 240

Query: 241 YALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPEPSRGRGVPVRGRGAAPPPPPV 300
           YALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPEPSRGRGVPVRGRGAAPPPPPV
Sbjct: 241 YALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPEPSRGRGVPVRGRGAAPPPPPV 300

Query: 301 PRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPP 360
           PRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPP
Sbjct: 301 PRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPP 360

Query: 361 PAPETYEEYGYDDTYAEQSYEGYEGYYSQSQGDSEYYDYGHGEVQDSYEAYGQDDWNGTR 420
           PAPETYEEYGYDDTYAEQSYEGYEGYYSQSQGDSEYYDYGHGEVQDSYEAYGQDDWNGTR
Sbjct: 361 PAPETYEEYGYDDTYAEQSYEGYEGYYSQSQGDSEYYDYGHGEVQDSYEAYGQDDWNGTR 420

Query: 421 PSLKAPPARPVKGAYREHPYGRY 443
           PSLKAPPARPVKGAYREHPYGRY
Sbjct: 421 PSLKAPPARPVKGAYREHPYGRY 443


>gi|189217895 KH domain-containing, RNA-binding, signal
           transduction-associated protein 2 [Homo sapiens]
          Length = 349

 Score =  429 bits (1102), Expect = e-120
 Identities = 225/364 (61%), Positives = 262/364 (71%), Gaps = 37/364 (10%)

Query: 100 ENKYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEEN-YLDLFSHKNMKLKE 158
           E KYLPELMAEKDSLDPSF HA +LL  EIEK Q  D KK+DEE  YLD+ S+KN+KL E
Sbjct: 3   EEKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSE 62

Query: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
           RVLIPVKQYPKFNFVGK+LGP+GN++KRLQEETGAK+S+LGKGSMRDKAKEEELRK G+ 
Sbjct: 63  RVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEA 122

Query: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVP 278
           KYAHL+ +LHV IEVF PP EAY+ M+HA+EE+KKFLVPD  D+I QEQ  ELSYLNG  
Sbjct: 123 KYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSE 182

Query: 279 EPSRGRGV-----------PVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGA 327
           +  RGRG+           P RGRG A PPPP P GRGV  PRG+          +TRGA
Sbjct: 183 DSGRGRGIRGRGIRIAPTAPSRGRGGAIPPPP-PPGRGVLTPRGS---------TVTRGA 232

Query: 328 TVTRGVPPPPTVRGAPAPRARTAGIQRIP---LPPPPAPETYEEYGYDDTYA----EQSY 380
                +P PP  RG P PRAR  G   +P    PPPPA E YEEYGYDD Y     +Q+Y
Sbjct: 233 -----LPVPPVARGVPTPRAR--GAPTVPGYRAPPPPAHEAYEEYGYDDGYGGEYDDQTY 285

Query: 381 EGYE-GYYSQSQGDSEYYDYGHGEVQDSYEAYGQDDWNGTRPSLKAPPARPVKGAYREHP 439
           E Y+  Y +Q+Q   EYYDYGHG  +D+Y++Y  ++W  TR SLKAPP R  +G YREHP
Sbjct: 286 ETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTRSSLKAPPQRSARGGYREHP 345

Query: 440 YGRY 443
           YGRY
Sbjct: 346 YGRY 349


>gi|5730073 KH domain containing, RNA binding, signal transduction
           associated 3 [Homo sapiens]
          Length = 346

 Score =  375 bits (964), Expect = e-104
 Identities = 208/360 (57%), Positives = 252/360 (70%), Gaps = 31/360 (8%)

Query: 100 ENKYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKER 159
           E KYLPELMAEKDSLDPSFTHA++L+  EIEK QKG+ K  DEE Y+D+  +KNMKL ++
Sbjct: 2   EEKYLPELMAEKDSLDPSFTHALRLVNQEIEKFQKGEGK--DEEKYIDVVINKNMKLGQK 59

Query: 160 VLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPK 219
           VLIPVKQ+PKFNFVGK+LGP+GN++KRLQEET  K+S+LGKGSMRDKAKEEELRK G+ K
Sbjct: 60  VLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAK 119

Query: 220 YAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPE 279
           Y HLN DLHV IEVF PP EAYA M HA+EE+KKFL+PD  D+I Q Q  EL+YLNG  E
Sbjct: 120 YFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSE 179

Query: 280 PSR---GRGVP-VRGRGAAPPPPPVPRGRG--VGPPRGALV-RGTPV-RGAITRGATVTR 331
            +     RG P +R RG   P P + RGRG     P G +V RGTP  RG ++    V+R
Sbjct: 180 NADVPVVRGKPTLRTRGV--PAPAITRGRGGVTARPVGVVVPRGTPTPRGVLSTRGPVSR 237

Query: 332 GVPPPPTVRGAPAPRAR---TAGIQRIPLPPPPAPETYEEYGYDD----TYAEQSYEGYE 384
           G       RG   PRAR     G +  P PPPP  ETY EY YDD     Y EQSY+ Y+
Sbjct: 238 G-------RGLLTPRARGVPPTGYR--PPPPPPTQETYGEYDYDDGYGTAYDEQSYDSYD 288

Query: 385 GYYS-QSQGDSEYYDYGHGEVQDSYEAYGQDDWNGTRPSLKAPPARPVKGAYREHPYGRY 443
             YS  +Q  ++YYDYGHG  +++Y++YGQ++W  +R   KAP AR  KG YR+ PYGRY
Sbjct: 289 NSYSTPAQSGADYYDYGHGLSEETYDSYGQEEWTNSRH--KAPSARTAKGVYRDQPYGRY 346


>gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7B
           [Homo sapiens]
          Length = 319

 Score =  134 bits (336), Expect = 2e-31
 Identities = 107/299 (35%), Positives = 143/299 (47%), Gaps = 31/299 (10%)

Query: 96  KMEPENKYLPELMAEKDSLDPS------FTHAMQLLTAEIEKIQK--------GDSKKDD 141
           K +P   YL +LM +K  +         F H  +LL  EI +++K        G ++K  
Sbjct: 10  KPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRS 69

Query: 142 EENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
            E  L       ++L+E++ +PVK+YP FNFVG+ILGP+G T K+L+ ETG KI V GKG
Sbjct: 70  AE--LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127

Query: 202 SMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DM 259
           SMRDK KEE+ R  G P + HLN DLHV I V      A   +  A+EEVKK LVP  + 
Sbjct: 128 SMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG 185

Query: 260 MDDICQEQFLELSYLNGVPEPS--RGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGT 317
            D + + Q +EL+ LNG    +  +   +       A   P +  G     P  AL   T
Sbjct: 186 EDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPT 245

Query: 318 PVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYA 376
           P    I     + R +       G P P A       I  P P A   Y  Y Y  T A
Sbjct: 246 PAGPTI---MPLIRQIQTAVMPNGTPHPTA------AIVPPGPEAGLIYTPYEYPYTLA 295


>gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7
           [Homo sapiens]
          Length = 325

 Score =  134 bits (336), Expect = 2e-31
 Identities = 107/299 (35%), Positives = 143/299 (47%), Gaps = 31/299 (10%)

Query: 96  KMEPENKYLPELMAEKDSLDPS------FTHAMQLLTAEIEKIQK--------GDSKKDD 141
           K +P   YL +LM +K  +         F H  +LL  EI +++K        G ++K  
Sbjct: 10  KPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRS 69

Query: 142 EENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
            E  L       ++L+E++ +PVK+YP FNFVG+ILGP+G T K+L+ ETG KI V GKG
Sbjct: 70  AE--LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127

Query: 202 SMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DM 259
           SMRDK KEE+ R  G P + HLN DLHV I V      A   +  A+EEVKK LVP  + 
Sbjct: 128 SMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG 185

Query: 260 MDDICQEQFLELSYLNGVPEPS--RGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGT 317
            D + + Q +EL+ LNG    +  +   +       A   P +  G     P  AL   T
Sbjct: 186 EDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPT 245

Query: 318 PVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYA 376
           P    I     + R +       G P P A       I  P P A   Y  Y Y  T A
Sbjct: 246 PAGPTI---MPLIRQIQTAVMPNGTPHPTA------AIVPPGPEAGLIYTPYEYPYTLA 295


>gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6
           [Homo sapiens]
          Length = 319

 Score =  134 bits (336), Expect = 2e-31
 Identities = 107/299 (35%), Positives = 143/299 (47%), Gaps = 31/299 (10%)

Query: 96  KMEPENKYLPELMAEKDSLDPS------FTHAMQLLTAEIEKIQK--------GDSKKDD 141
           K +P   YL +LM +K  +         F H  +LL  EI +++K        G ++K  
Sbjct: 10  KPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRS 69

Query: 142 EENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
            E  L       ++L+E++ +PVK+YP FNFVG+ILGP+G T K+L+ ETG KI V GKG
Sbjct: 70  AE--LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127

Query: 202 SMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DM 259
           SMRDK KEE+ R  G P + HLN DLHV I V      A   +  A+EEVKK LVP  + 
Sbjct: 128 SMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG 185

Query: 260 MDDICQEQFLELSYLNGVPEPS--RGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGT 317
            D + + Q +EL+ LNG    +  +   +       A   P +  G     P  AL   T
Sbjct: 186 EDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPT 245

Query: 318 PVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYA 376
           P    I     + R +       G P P A       I  P P A   Y  Y Y  T A
Sbjct: 246 PAGPTI---MPLIRQIQTAVMPNGTPHPTA------AIVPPGPEAGLIYTPYEYPYTLA 295


>gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5
           [Homo sapiens]
          Length = 341

 Score =  134 bits (336), Expect = 2e-31
 Identities = 107/299 (35%), Positives = 143/299 (47%), Gaps = 31/299 (10%)

Query: 96  KMEPENKYLPELMAEKDSLDPS------FTHAMQLLTAEIEKIQK--------GDSKKDD 141
           K +P   YL +LM +K  +         F H  +LL  EI +++K        G ++K  
Sbjct: 10  KPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRS 69

Query: 142 EENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201
            E  L       ++L+E++ +PVK+YP FNFVG+ILGP+G T K+L+ ETG KI V GKG
Sbjct: 70  AE--LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127

Query: 202 SMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DM 259
           SMRDK KEE+ R  G P + HLN DLHV I V      A   +  A+EEVKK LVP  + 
Sbjct: 128 SMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG 185

Query: 260 MDDICQEQFLELSYLNGVPEPS--RGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGT 317
            D + + Q +EL+ LNG    +  +   +       A   P +  G     P  AL   T
Sbjct: 186 EDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPT 245

Query: 318 PVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYA 376
           P    I     + R +       G P P A       I  P P A   Y  Y Y  T A
Sbjct: 246 PAGPTI---MPLIRQIQTAVMPNGTPHPTA------AIVPPGPEAGLIYTPYEYPYTLA 295


>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
          Length = 548

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 20/130 (15%)

Query: 155 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRD---KAKEEE 211
           ++ ++V+IP  +YP+ NFVG ++GP+GNT+K +++E  AKI + GKGS+++     K+ +
Sbjct: 135 RVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQ 194

Query: 212 LRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFL-----VPDMMDDICQE 266
           +  G D         LH  +            +  A+E+++  L      P+  +D+ + 
Sbjct: 195 MLPGEDE-------PLHALV-----TANTMENVKKAVEQIRNILKQGIETPEDQNDLRKM 242

Query: 267 QFLELSYLNG 276
           Q  EL+ LNG
Sbjct: 243 QLRELARLNG 252



 Score = 33.1 bits (74), Expect = 0.52
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 275 NGVPEPSRGRGV-PVRGRGAAPPPPPVPRGRGVGPPRGAL 313
           +GV    +G+G+ P    G  PPPPP P G+   PP G L
Sbjct: 458 SGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPL 497



 Score = 32.7 bits (73), Expect = 0.68
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 295 PPPPPV-----PRGRGVGPPRGALVRGTPVRGAITRGATVTRGV------------PPPP 337
           PPPPP+     P G    PP    +  TPV   + R     +G+            PPPP
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYR-LHQGKGMMPPPPMGMMPPPPPPP 485

Query: 338 TVRGAPAPRARTAGIQRIPLPPPPAP 363
           + +  P P       Q+    PPP P
Sbjct: 486 SGQPPPPPSGPLPPWQQQQQQPPPPP 511



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 34/119 (28%), Positives = 43/119 (36%), Gaps = 23/119 (19%)

Query: 7   PAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPL----PHRSR-------GGGGGSRGGA 55
           PA     S+ R  +   +   PS+  T   +PP     P  SR       GG GG  GG 
Sbjct: 335 PATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGG- 393

Query: 56  RASPATQPPPLLPPSATGPDA------TVGGPAPTPLLPPSATASVKMEPENKYLPELM 108
              P + P PL  PS TG            GP P  + PP    +    P   + P  M
Sbjct: 394 ---PHSFPHPL--PSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPM 447


>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
          Length = 638

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 20/130 (15%)

Query: 155 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRD---KAKEEE 211
           ++ ++V+IP  +YP+ NFVG ++GP+GNT+K +++E  AKI + GKGS+++     K+ +
Sbjct: 135 RVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQ 194

Query: 212 LRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFL-----VPDMMDDICQE 266
           +  G D         LH  +            +  A+E+++  L      P+  +D+ + 
Sbjct: 195 MLPGEDE-------PLHALV-----TANTMENVKKAVEQIRNILKQGIETPEDQNDLRKM 242

Query: 267 QFLELSYLNG 276
           Q  EL+ LNG
Sbjct: 243 QLRELARLNG 252



 Score = 33.1 bits (74), Expect = 0.52
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 275 NGVPEPSRGRGV-PVRGRGAAPPPPPVPRGRGVGPPRGAL 313
           +GV    +G+G+ P    G  PPPPP P G+   PP G L
Sbjct: 458 SGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPL 497



 Score = 32.7 bits (73), Expect = 0.68
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 295 PPPPPV-----PRGRGVGPPRGALVRGTPVRGAITRGATVTRGV------------PPPP 337
           PPPPP+     P G    PP    +  TPV   + R     +G+            PPPP
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYR-LHQGKGMMPPPPMGMMPPPPPPP 485

Query: 338 TVRGAPAPRARTAGIQRIPLPPPPAP 363
           + +  P P       Q+    PPP P
Sbjct: 486 SGQPPPPPSGPLPPWQQQQQQPPPPP 511



 Score = 32.3 bits (72), Expect = 0.89
 Identities = 28/108 (25%), Positives = 38/108 (35%), Gaps = 30/108 (27%)

Query: 278 PEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPV----RGAITRGATVTRGV 333
           P P  G   P + +   PPPPP        PP  ++   TP+        T  +  T  +
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPP--------PPSSSMASSTPLPWQQNTTTTTTSAGTGSI 541

Query: 334 PP-------------PPTVRGAPAPRARTAGIQ-----RIPLPPPPAP 363
           PP              P ++G P       G+Q       P PPPP P
Sbjct: 542 PPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPP 589



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 34/119 (28%), Positives = 43/119 (36%), Gaps = 23/119 (19%)

Query: 7   PAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPL----PHRSR-------GGGGGSRGGA 55
           PA     S+ R  +   +   PS+  T   +PP     P  SR       GG GG  GG 
Sbjct: 335 PATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGG- 393

Query: 56  RASPATQPPPLLPPSATGPDA------TVGGPAPTPLLPPSATASVKMEPENKYLPELM 108
              P + P PL  PS TG            GP P  + PP    +    P   + P  M
Sbjct: 394 ---PHSFPHPL--PSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPM 447


>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
          Length = 639

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 20/130 (15%)

Query: 155 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRD---KAKEEE 211
           ++ ++V+IP  +YP+ NFVG ++GP+GNT+K +++E  AKI + GKGS+++     K+ +
Sbjct: 135 RVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQ 194

Query: 212 LRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFL-----VPDMMDDICQE 266
           +  G D         LH  +            +  A+E+++  L      P+  +D+ + 
Sbjct: 195 MLPGEDE-------PLHALV-----TANTMENVKKAVEQIRNILKQGIETPEDQNDLRKM 242

Query: 267 QFLELSYLNG 276
           Q  EL+ LNG
Sbjct: 243 QLRELARLNG 252



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 7/70 (10%)

Query: 296 PPPPVPRGRGVGPPRGALVRGTPVRGAITRGAT--VTRGVPPPPTVRGAPAPRARTAGIQ 353
           PP    +      P    ++G P    +  G    +  G PPPP     P P   +AG+ 
Sbjct: 542 PPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPP-----PPPPPGSAGMM 596

Query: 354 RIPLPPPPAP 363
             P PPPP P
Sbjct: 597 YAPPPPPPPP 606



 Score = 32.7 bits (73), Expect = 0.68
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 295 PPPPPV-----PRGRGVGPPRGALVRGTPVRGAITRGATVTRGV------------PPPP 337
           PPPPP+     P G    PP    +  TPV   + R     +G+            PPPP
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYR-LHQGKGMMPPPPMGMMPPPPPPP 485

Query: 338 TVRGAPAPRARTAGIQRIPLPPPPAP 363
           + +  P P       Q+    PPP P
Sbjct: 486 SGQPPPPPSGPLPPWQQQQQQPPPPP 511



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 26/79 (32%)

Query: 292 GAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAG 351
           GA PPPPP P G                    + G       PPPP +  +        G
Sbjct: 580 GAPPPPPPPPPG--------------------SAGMMYAPPPPPPPPMDPSNFVTMMGMG 619

Query: 352 IQRI------PLPPPPAPE 364
           +  +      P PPPP P+
Sbjct: 620 VAGMPPFGMPPAPPPPPPQ 638



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 34/119 (28%), Positives = 43/119 (36%), Gaps = 23/119 (19%)

Query: 7   PAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPL----PHRSR-------GGGGGSRGGA 55
           PA     S+ R  +   +   PS+  T   +PP     P  SR       GG GG  GG 
Sbjct: 335 PATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGG- 393

Query: 56  RASPATQPPPLLPPSATGPDA------TVGGPAPTPLLPPSATASVKMEPENKYLPELM 108
              P + P PL  PS TG            GP P  + PP    +    P   + P  M
Sbjct: 394 ---PHSFPHPL--PSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPM 447


>gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a
           [Homo sapiens]
          Length = 464

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 45/134 (33%), Positives = 55/134 (41%), Gaps = 18/134 (13%)

Query: 282 RGR--GVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTV 339
           RGR  G P+RGRG     PP   GR + P R      +P RG            PPPP  
Sbjct: 247 RGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGP----------PPPPPGR 296

Query: 340 RGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDT-YAEQSYEGYEGYYSQSQGDSEYYD 398
            G    RAR      +PLPPPP P   +   YD        Y+G  G+ +    DS    
Sbjct: 297 GGRGGSRAR-----NLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDT 351

Query: 399 YGHGEVQDSYEAYG 412
           +   E Q +YE  G
Sbjct: 352 WSPSEWQMAYEPQG 365



 Score = 37.4 bits (85), Expect = 0.028
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 16  GRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPATQPPP 65
           GR G   P         +P R PP P   RGG GGSR  AR  P   PPP
Sbjct: 267 GRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSR--ARNLPLPPPPP 314



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 270 ELSYLNGVPEPSRGRG--VPVRGRGAAPPPPPVPRG 303
           ++S   G P P  GRG     R R    PPPP PRG
Sbjct: 282 DMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRG 317


>gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b
           [Homo sapiens]
          Length = 463

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 45/134 (33%), Positives = 55/134 (41%), Gaps = 18/134 (13%)

Query: 282 RGR--GVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTV 339
           RGR  G P+RGRG     PP   GR + P R      +P RG            PPPP  
Sbjct: 247 RGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGP----------PPPPPGR 296

Query: 340 RGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDT-YAEQSYEGYEGYYSQSQGDSEYYD 398
            G    RAR      +PLPPPP P   +   YD        Y+G  G+ +    DS    
Sbjct: 297 GGRGGSRAR-----NLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDT 351

Query: 399 YGHGEVQDSYEAYG 412
           +   E Q +YE  G
Sbjct: 352 WSPSEWQMAYEPQG 365



 Score = 37.4 bits (85), Expect = 0.028
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 16  GRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPATQPPP 65
           GR G   P         +P R PP P   RGG GGSR  AR  P   PPP
Sbjct: 267 GRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSR--ARNLPLPPPPP 314



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 270 ELSYLNGVPEPSRGRG--VPVRGRGAAPPPPPVPRG 303
           ++S   G P P  GRG     R R    PPPP PRG
Sbjct: 282 DMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRG 317


>gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a
           [Homo sapiens]
          Length = 464

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 45/134 (33%), Positives = 55/134 (41%), Gaps = 18/134 (13%)

Query: 282 RGR--GVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTV 339
           RGR  G P+RGRG     PP   GR + P R      +P RG            PPPP  
Sbjct: 247 RGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGP----------PPPPPGR 296

Query: 340 RGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDT-YAEQSYEGYEGYYSQSQGDSEYYD 398
            G    RAR      +PLPPPP P   +   YD        Y+G  G+ +    DS    
Sbjct: 297 GGRGGSRAR-----NLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDT 351

Query: 399 YGHGEVQDSYEAYG 412
           +   E Q +YE  G
Sbjct: 352 WSPSEWQMAYEPQG 365



 Score = 37.4 bits (85), Expect = 0.028
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 16  GRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPATQPPP 65
           GR G   P         +P R PP P   RGG GGSR  AR  P   PPP
Sbjct: 267 GRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSR--ARNLPLPPPPP 314



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 270 ELSYLNGVPEPSRGRG--VPVRGRGAAPPPPPVPRG 303
           ++S   G P P  GRG     R R    PPPP PRG
Sbjct: 282 DMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRG 317


>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
          Length = 614

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 79/310 (25%), Positives = 119/310 (38%), Gaps = 59/310 (19%)

Query: 168 PKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDL 227
           P FN   K+ GP  + ++ +Q ETGAK+ + GKGS     +    R+  +P Y +++   
Sbjct: 244 PTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGS--GCIEPASGREAFEPMYIYISHPK 301

Query: 228 HVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPE-----PSR 282
              +      CE      HA  E  +F V  +   +    + + S ++ VP      PS 
Sbjct: 302 PEGLAAAKKLCENLLQTVHA--EYSRF-VNQINTAVPLPGYTQPSAISSVPPQPPYYPSN 358

Query: 283 G--RGVPVRGRGAAPPPPPVPRGRGVG---PPRGALVRGTPVRGAITRGA-------TVT 330
           G   G PV      PP  PV    GV    PP  +L  G  V  A+  G         +T
Sbjct: 359 GYQSGYPV----VPPPQQPVQPPYGVPSIVPPAVSLAPG--VLPALPTGVPPVPTQYPIT 412

Query: 331 RGVPPP---------PTVRGAPAPRARTAGIQRIPLPPPPAPE--TYEEYGYDDTYAEQS 379
           +  PP          P +  AP   A  AG Q  P P PP P     ++  + +   ++ 
Sbjct: 413 QVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDER 472

Query: 380 YEGYEGYYSQSQGDSEYYDYGHGEVQDSYEAYGQDDWNGTRPS------------LKAPP 427
             G  GY     G     + G G     + +  + +  G++P+            L  PP
Sbjct: 473 ESGLLGY---QHGPIHMTNLGTG-----FSSQNEIEGAGSKPASSSGKERERDRQLMPPP 524

Query: 428 ARPVKGAYRE 437
           A PV G   E
Sbjct: 525 AFPVTGIKTE 534



 Score = 30.0 bits (66), Expect = 4.4
 Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 3/94 (3%)

Query: 48  GGGSRGGARASPATQPPPLLPPSATGPDATVGGPAP-TPLLPPSATASVKMEPENKYLPE 106
           G G R      PA  P   LPP+A G + T  G +P      PS           K    
Sbjct: 10  GAGGRRSKWDQPAPAPLLFLPPAAPGGEVTSSGGSPGGTTAAPSGALDAAAAVAAKINAM 69

Query: 107 LMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKD 140
           LMA K  L P+  +A + L A  + +    SK D
Sbjct: 70  LMA-KGKLKPT-QNASEKLQAPGKGLTSNKSKDD 101


>gi|153252068 testes-specific heterogenous nuclear ribonucleoprotein
           G-T [Homo sapiens]
          Length = 392

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 52/176 (29%), Positives = 65/176 (36%), Gaps = 44/176 (25%)

Query: 278 PEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRG---------AT 328
           P P R RG P   RG         RG G GP R     G    G  T             
Sbjct: 96  PPPPRSRGRPRFLRGT--------RGGGGGPRRSPSRGGPDDDGGYTADFDLRPSRAPMP 147

Query: 329 VTRGVPP----PPTVRGAPAPRARTAG-------------------IQRIPLPP---PPA 362
           + RG PP    PP  R AP+  AR++G                    +R PLPP   P  
Sbjct: 148 MKRGPPPRRVGPPPKRAAPSGPARSSGGGMRGRALAVRGRDGYSGPPRREPLPPRRDPYL 207

Query: 363 PETYEEYGYDDTYAEQSYEGYEGYYSQSQGDSEYYDYGHGEVQDSYEAYGQDDWNG 418
               E Y   D Y+ + Y    G ++ S G+  + DYGH  V+D     G  D +G
Sbjct: 208 GPRDEGYSSRDGYSSRDYREPRG-FAPSPGEYTHRDYGHSSVRDDCPLRGYSDRDG 262



 Score = 33.1 bits (74), Expect = 0.52
 Identities = 43/190 (22%), Positives = 57/190 (30%), Gaps = 51/190 (26%)

Query: 282 RGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRG 341
           RGR + VRGR     PP     R   PPR     G    G  +R    +R    P   RG
Sbjct: 178 RGRALAVRGRDGYSGPPR----REPLPPRRDPYLGPRDEGYSSRDGYSSRDYREP---RG 230

Query: 342 APAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYAEQSYEGYEGYYSQSQGDSEYYD--- 398
                            P P   T+ +YG+     +    GY         D +Y D   
Sbjct: 231 ---------------FAPSPGEYTHRDYGHSSVRDDCPLRGYSDRDGYGGRDRDYGDHLS 275

Query: 399 --------------------------YGHGEVQDSYEAYGQDDWNGTRPSLKAPPARPVK 432
                                     YG G   + Y  Y  D ++G R S  +   R  +
Sbjct: 276 RGSHREPFESYGELRGAAPGRGTPPSYGGGGRYEEYRGYSPDAYSGGRDSYSSSYGRSDR 335

Query: 433 GAYREHPYGR 442
            +   H  GR
Sbjct: 336 YSRGRHRVGR 345


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 287 PVRGRGAAPPPPPVPRGRGVGPPRGALVRGT--PVRGAITRGATVTRGVPPPPTVRGAPA 344
           P+ G    PPPPP+P G G+ P   +L  GT  P    +   A +    PP P   G P 
Sbjct: 635 PLSGDATIPPPPPLPEGVGI-PSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPP 693

Query: 345 PRARTAGIQRIPLPPPPAP 363
           P     G   +P PPPP P
Sbjct: 694 PPPPLPGEAGMPPPPPPLP 712



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 292 GAAPPPPPVPRGRGVGPPRGALV--RGTPVRGAITRGATVTRGVPPPPTVRGAPAPRART 349
           G  PPPPP+P   G+ PP   L    G P       G     G+PPPP   G P P    
Sbjct: 690 GIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP----GIPPPPPGMGMPPPPPFG 745

Query: 350 AGIQRIPLPP 359
            G+   P+ P
Sbjct: 746 FGVPAAPVLP 755



 Score = 38.1 bits (87), Expect = 0.016
 Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 278 PEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGT-PVRGAITRGATVTRGVPPP 336
           P P      P+ G      PP +P G  + PP       T P    +  G     G+P P
Sbjct: 602 PPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGV----GIPSP 657

Query: 337 PTVRGAPA--PRARTAGIQRIPLPPPPAP 363
            ++ G  A  P     G  RIP PPPP P
Sbjct: 658 SSLPGGTAIPPPPPLPGSARIPPPPPPLP 686



 Score = 35.8 bits (81), Expect = 0.080
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 21/69 (30%)

Query: 276 GVPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPP 335
           G+P P      P+ G    PPPPP P G G+ PP   +  G P               PP
Sbjct: 703 GMPPPPP----PLPGGPGIPPPPPFPGGPGIPPPPPGM--GMP---------------PP 741

Query: 336 PPTVRGAPA 344
           PP   G PA
Sbjct: 742 PPFGFGVPA 750



 Score = 33.1 bits (74), Expect = 0.52
 Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 21/91 (23%)

Query: 288 VRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRG------ 341
           V  R   PP PP+P   G       ++   P  G  T         PPPP + G      
Sbjct: 567 VPSRAPVPPAPPLPGDSGT------IIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISS 620

Query: 342 --------APAPRARTAGIQRIPLPPPPAPE 364
                   A +P    +G   IP PPPP PE
Sbjct: 621 PPSLPGGTAISPPPPLSGDATIP-PPPPLPE 650



 Score = 33.1 bits (74), Expect = 0.52
 Identities = 34/108 (31%), Positives = 39/108 (36%), Gaps = 20/108 (18%)

Query: 16  GRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGS--------RGGARASP-------A 60
           G SG++ P    P    TP   PP P       GG          GG   SP       A
Sbjct: 581 GDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDA 640

Query: 61  TQPPPLLPPSATG---PDATVGGPAPTPLLPPSATASVKMEPENKYLP 105
           T PPP   P   G   P +  GG A  P  PP    S ++ P    LP
Sbjct: 641 TIPPPPPLPEGVGIPSPSSLPGGTAIPP--PPPLPGSARIPPPPPPLP 686



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 24/70 (34%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 38  PPLPHRSRGGGGGSRGGARASPATQPPPLLPPSA--TGPDATVGGPAPTPLLPPSATASV 95
           PP P    G G  S        A  PPP LP SA    P   + G A  P  PP      
Sbjct: 643 PPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEA 702

Query: 96  KMEPENKYLP 105
            M P    LP
Sbjct: 703 GMPPPPPPLP 712


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 287 PVRGRGAAPPPPPVPRGRGVGPPRGALVRGT--PVRGAITRGATVTRGVPPPPTVRGAPA 344
           P+ G    PPPPP+P G G+ P   +L  GT  P    +   A +    PP P   G P 
Sbjct: 644 PLSGDATIPPPPPLPEGVGI-PSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPP 702

Query: 345 PRARTAGIQRIPLPPPPAP 363
           P     G   +P PPPP P
Sbjct: 703 PPPPLPGEAGMPPPPPPLP 721



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 292 GAAPPPPPVPRGRGVGPPRGALV--RGTPVRGAITRGATVTRGVPPPPTVRGAPAPRART 349
           G  PPPPP+P   G+ PP   L    G P       G     G+PPPP   G P P    
Sbjct: 699 GIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP----GIPPPPPGMGMPPPPPFG 754

Query: 350 AGIQRIPLPP 359
            G+   P+ P
Sbjct: 755 FGVPAAPVLP 764



 Score = 38.1 bits (87), Expect = 0.016
 Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 278 PEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGT-PVRGAITRGATVTRGVPPP 336
           P P      P+ G      PP +P G  + PP       T P    +  G     G+P P
Sbjct: 611 PPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGV----GIPSP 666

Query: 337 PTVRGAPA--PRARTAGIQRIPLPPPPAP 363
            ++ G  A  P     G  RIP PPPP P
Sbjct: 667 SSLPGGTAIPPPPPLPGSARIPPPPPPLP 695



 Score = 35.8 bits (81), Expect = 0.080
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 21/69 (30%)

Query: 276 GVPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPP 335
           G+P P      P+ G    PPPPP P G G+ PP   +  G P               PP
Sbjct: 712 GMPPPPP----PLPGGPGIPPPPPFPGGPGIPPPPPGM--GMP---------------PP 750

Query: 336 PPTVRGAPA 344
           PP   G PA
Sbjct: 751 PPFGFGVPA 759



 Score = 33.1 bits (74), Expect = 0.52
 Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 21/91 (23%)

Query: 288 VRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRG------ 341
           V  R   PP PP+P   G       ++   P  G  T         PPPP + G      
Sbjct: 576 VPSRAPVPPAPPLPGDSGT------IIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISS 629

Query: 342 --------APAPRARTAGIQRIPLPPPPAPE 364
                   A +P    +G   IP PPPP PE
Sbjct: 630 PPSLPGGTAISPPPPLSGDATIP-PPPPLPE 659



 Score = 33.1 bits (74), Expect = 0.52
 Identities = 34/108 (31%), Positives = 39/108 (36%), Gaps = 20/108 (18%)

Query: 16  GRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGS--------RGGARASP-------A 60
           G SG++ P    P    TP   PP P       GG          GG   SP       A
Sbjct: 590 GDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDA 649

Query: 61  TQPPPLLPPSATG---PDATVGGPAPTPLLPPSATASVKMEPENKYLP 105
           T PPP   P   G   P +  GG A  P  PP    S ++ P    LP
Sbjct: 650 TIPPPPPLPEGVGIPSPSSLPGGTAIPP--PPPLPGSARIPPPPPPLP 695



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 24/70 (34%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 38  PPLPHRSRGGGGGSRGGARASPATQPPPLLPPSA--TGPDATVGGPAPTPLLPPSATASV 95
           PP P    G G  S        A  PPP LP SA    P   + G A  P  PP      
Sbjct: 652 PPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEA 711

Query: 96  KMEPENKYLP 105
            M P    LP
Sbjct: 712 GMPPPPPPLP 721


>gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo
           sapiens]
          Length = 390

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 54/175 (30%), Positives = 67/175 (38%), Gaps = 45/175 (25%)

Query: 289 RGRGAAPPPPPV---PRGRGVGPPRGALVRGTPVRG--------------AITRGAT-VT 330
           RGR   PPPP     PRG G G       RG P RG              + +RG   V 
Sbjct: 91  RGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVK 150

Query: 331 RGVPP----PPTVRGAPAPRARTAGIQ--RIPLP--------PP---PAPETYEEY---- 369
           RG PP    P   R AP+   R++     R PL         PP   P P   + Y    
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPR 210

Query: 370 --GYD--DTYAEQSYEGYEGY--YSQSQGDSEYYDYGHGEVQDSYEAYGQDDWNG 418
             GY   D+Y+ + Y        Y+    D  Y DYGH   +D Y + G  D +G
Sbjct: 211 DDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYGDRDG 265


>gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo
           sapiens]
          Length = 390

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 54/175 (30%), Positives = 67/175 (38%), Gaps = 45/175 (25%)

Query: 289 RGRGAAPPPPPV---PRGRGVGPPRGALVRGTPVRG--------------AITRGAT-VT 330
           RGR   PPPP     PRG G G       RG P RG              + +RG   V 
Sbjct: 91  RGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVK 150

Query: 331 RGVPP----PPTVRGAPAPRARTAGIQ--RIPLP--------PP---PAPETYEEY---- 369
           RG PP    P   R AP+   R++     R PL         PP   P P   + Y    
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPR 210

Query: 370 --GYD--DTYAEQSYEGYEGY--YSQSQGDSEYYDYGHGEVQDSYEAYGQDDWNG 418
             GY   D+Y+ + Y        Y+    D  Y DYGH   +D Y + G  D +G
Sbjct: 211 DDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYGDRDG 265


>gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]
          Length = 391

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 61/223 (27%), Positives = 76/223 (34%), Gaps = 98/223 (43%)

Query: 297 PPPVPRGRGVGPPRGAL--------VRGTPVRG--------------AITRGAT-VTRGV 333
           PPP PR RG  PPRG           RG P RG              + +RG   V RG 
Sbjct: 96  PPPPPRSRG--PPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGP 153

Query: 334 PP----PPTVRGAPAPRARTAG------------------IQRIPLP------------- 358
           PP    PP  R AP+   R++                    +R PLP             
Sbjct: 154 PPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDG 213

Query: 359 ----------------------PPPAPETYEEYGYD---DTYAEQSYEGYEGYYSQSQGD 393
                                 PPP   TY +YG+    D Y  + Y   +GY      D
Sbjct: 214 YSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGR----D 269

Query: 394 SEYYDY-GHGEVQDSYEAYGQDDWNGTRPSLKAPPARPVKGAY 435
            +Y D+   G  +DSYE+YG         S  APP R    +Y
Sbjct: 270 RDYSDHPSGGSYRDSYESYGN--------SRSAPPTRGPPPSY 304



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query: 36  RQPPLPHRSRGGGGGSRGGARASPATQPPP 65
           R PP P RSRG   G RGG   S  T+ PP
Sbjct: 94  RGPPPPPRSRGPPRGLRGGRGGSGGTRGPP 123


>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
          Length = 407

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 43/150 (28%), Positives = 54/150 (36%), Gaps = 12/150 (8%)

Query: 283 GRGVPVRGRGAAPPPPPVPRGRGVGPPRG-ALVRGTPVRGAITRGATVTRGVPPPPTVRG 341
           G G P  GRGA PPPPP        PP G    +G P         +   G PPPP  + 
Sbjct: 245 GYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQF 304

Query: 342 AP---APRARTAGIQRIPLPPPPAPETYEEYGYDDTYAEQSYEGYEGYYSQSQGDSEYYD 398
           AP    P   T G   +  PPPP+    +         +  Y  Y GY     G    + 
Sbjct: 305 APPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPDFPYGQYAGYGQDLSG----FG 360

Query: 399 YGHGEVQDSYEAYGQDDWNGTRPSLKAPPA 428
            G  +      +YG      + P    PPA
Sbjct: 361 QGFSDPSQQPPSYG----GPSVPGSGGPPA 386



 Score = 32.7 bits (73), Expect = 0.68
 Identities = 58/280 (20%), Positives = 92/280 (32%), Gaps = 63/280 (22%)

Query: 174 GKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEV 233
           G+ + P+  T + +Q E         KG   D +K  ++  GG P       +L  + + 
Sbjct: 77  GRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCG-ETELREYFKK 135

Query: 234 FGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLN------------------ 275
           FG   E   +     +  + F      D+   +Q + + + +                  
Sbjct: 136 FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKS 195

Query: 276 ---GVPEPSR--GRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVT 330
              G P  S+   R VP    G A  PPP  + +G GP           +G         
Sbjct: 196 QAPGQPGASQWGSRVVPNAANGWAGQPPPTWQ-QGYGP-----------QGMWVPAGQAI 243

Query: 331 RGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYAEQSYEGYEGYYSQS 390
            G  PPP  RGA               PPPP P T     Y  +     +   +G + Q 
Sbjct: 244 GGYGPPPAGRGA---------------PPPPPPFT----SYIVSTPPGGFPPPQG-FPQG 283

Query: 391 QGDSEYYDYGHGEVQDSYEAYGQDDWNGTRPSLKAPPARP 430
            G    + +G+G      + +         P +  PPA P
Sbjct: 284 YGAPPQFSFGYGPPPPPPDQFAP-------PGVPPPPATP 316


>gi|160707881 formin 2 [Homo sapiens]
          Length = 1722

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 10/84 (11%)

Query: 277 VPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPP 336
           +P+P      P++G    PPPPP   G G+ PP        P  G +        G+PPP
Sbjct: 896 IPQPP-----PLQGTEMLPPPPPPLPGAGIPPP-----PPLPGAGILPLPPLPGAGIPPP 945

Query: 337 PTVRGAPAPRARTAGIQRIPLPPP 360
           P + GA  P         IPLPPP
Sbjct: 946 PPLPGAAIPPPPPLPGAGIPLPPP 969



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 35/91 (38%), Positives = 41/91 (45%), Gaps = 25/91 (27%)

Query: 278  PEPSRGRGVPVRGR--GAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPP 335
            P P  G G+P+     GA  PPPP   G G+ PP        P+ GA         G+PP
Sbjct: 956  PPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPP-------PPLPGA---------GIPP 999

Query: 336  PPTVRGA---PAPRARTAGIQRIPLPPPPAP 363
            PP + GA   P P    AGI     PPPP P
Sbjct: 1000 PPPLPGAGIPPPPPLPGAGIP----PPPPLP 1026



 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 35/91 (38%), Positives = 40/91 (43%), Gaps = 14/91 (15%)

Query: 278  PEPSRGRGVPVRGR--GAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPP 335
            P P  G G+P      GA  PPPP   G G+ PP      G P    + R      G+PP
Sbjct: 1099 PPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPR-----VGIPP 1153

Query: 336  PPTVRGA---PAPRARTAGIQRIPLPPPPAP 363
            PP + GA   P P    AGI     PPPP P
Sbjct: 1154 PPPLPGAGIPPPPPLPGAGIP----PPPPLP 1180



 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 35/91 (38%), Positives = 40/91 (43%), Gaps = 25/91 (27%)

Query: 278  PEPSRGRGVPVRGR--GAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPP 335
            P P  G G+P      GA  PPPP   G G+ PP        P+ GA         G+PP
Sbjct: 1000 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP-------PPLPGA---------GIPP 1043

Query: 336  PPTVRGA---PAPRARTAGIQRIPLPPPPAP 363
            PP + GA   P P    AGI     PPPP P
Sbjct: 1044 PPPLPGAGIPPPPPLPGAGIP----PPPPLP 1070



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 35/95 (36%), Positives = 41/95 (43%), Gaps = 22/95 (23%)

Query: 278  PEPSRGRGVPVRGR--GAAPPPPPVPRGRGVGP----PRGALVRGTPVRGAITRGATVTR 331
            P P  G G+P      GA  PPPP   G G+ P    PR  +    P+ GA         
Sbjct: 1110 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGA--------- 1160

Query: 332  GVPPPPTVRGA---PAPRARTAGIQRIPLPPPPAP 363
            G+PPPP + GA   P P     GI     PPPP P
Sbjct: 1161 GIPPPPPLPGAGIPPPPPLPGVGIP----PPPPLP 1191



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 34/91 (37%), Positives = 39/91 (42%), Gaps = 25/91 (27%)

Query: 278  PEPSRGRGVPVRGR--GAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPP 335
            P P  G G+P      GA  PPPP   G G+ PP        P+ GA         G+PP
Sbjct: 1044 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP-------PPLPGA---------GIPP 1087

Query: 336  PPTVRGA---PAPRARTAGIQRIPLPPPPAP 363
            PP + GA   P P     GI     PPPP P
Sbjct: 1088 PPPLPGAGIPPPPPLPGVGIP----PPPPLP 1114



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 20/86 (23%)

Query: 278  PEPSRGRGVPVRGR--GAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPP 335
            P P  G G+P      G   PPPP   G G+ PP        P+ GA         G+PP
Sbjct: 1088 PPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPP-------PPLPGA---------GIPP 1131

Query: 336  PPTVRGAPAPRARTAGIQRIPLPPPP 361
            PP + GA  P      + R+ +PPPP
Sbjct: 1132 PPPLPGAGIP--PPPPLPRVGIPPPP 1155



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 13/96 (13%)

Query: 278  PEPSRGRGVP----VRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGV 333
            P P  G G+P    + G G  PPPPP+P G G+ PP      G P   A       T G+
Sbjct: 1176 PPPLPGVGIPPPPPLPGVGI-PPPPPLP-GAGIPPPPPLPGMGIPPAPAPPLPPPGT-GI 1232

Query: 334  PPPPTVRGAPAPRARTAGIQRIPLP------PPPAP 363
            PPPP +  +  P     G   +P P      PPP P
Sbjct: 1233 PPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPPPLP 1268



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 32/89 (35%), Positives = 37/89 (41%), Gaps = 22/89 (24%)

Query: 278 PEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPP 337
           P P  G  VP     A P PPP+     + PP        P+ GA         G+PPPP
Sbjct: 880 PPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPP------PPPLPGA---------GIPPPP 924

Query: 338 TVRGA---PAPRARTAGIQRIPLPPPPAP 363
            + GA   P P    AGI     PPPP P
Sbjct: 925 PLPGAGILPLPPLPGAGIP----PPPPLP 949



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 31/90 (34%), Positives = 36/90 (40%), Gaps = 26/90 (28%)

Query: 278  PEPSRGRGVPVRGR--GAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPP 335
            P P  G G+P      G   PPPP   G G+ PP        P+ GA         G+PP
Sbjct: 1165 PPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPP-------PPLPGA---------GIPP 1208

Query: 336  PPTVRGAPAPRARTAGIQRIPLPPPPAPET 365
            PP + G         GI   P PP P P T
Sbjct: 1209 PPPLPG--------MGIPPAPAPPLPPPGT 1230



 Score = 34.7 bits (78), Expect = 0.18
 Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 8/67 (11%)

Query: 278  PEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVR---GAITRGATVTRGVP 334
            P P  G G+P      AP PP  P G G+ PP    V G P+    G+ T       G  
Sbjct: 1209 PPPLPGMGIP-----PAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFL 1263

Query: 335  PPPTVRG 341
            PPP   G
Sbjct: 1264 PPPLPSG 1270



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 9/75 (12%)

Query: 294 APPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGA-----PAPRAR 348
           +PPP P        P  G +    P    +T     +  +P PP ++G      P P   
Sbjct: 857 SPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLP 916

Query: 349 TAGIQRIPLPPPPAP 363
            AGI     PPPP P
Sbjct: 917 GAGIP----PPPPLP 927



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 4/34 (11%)

Query: 63   PPPLLPPSATGPDATVGG----PAPTPLLPPSAT 92
            PPP LP +   P   + G    PAP P LPP  T
Sbjct: 1197 PPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGT 1230


>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
           sapiens]
          Length = 247

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 54/194 (27%), Positives = 74/194 (38%), Gaps = 35/194 (18%)

Query: 261 DDICQEQFLELSYLNGVPEPSRGRG-------VPVRGRGAAPPP--------PPVPRGRG 305
           +D+ QE+ L L  ++G PE  R +G        P  G+   PPP        PP P G+ 
Sbjct: 21  EDVSQEESLFL--ISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKP 78

Query: 306 VG-PPRGALVR-------GTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPL 357
            G PP+G           G P R    +G   ++G PPPP     P P+      +  P 
Sbjct: 79  EGRPPQGGNQSQGPPPHPGKPERPP-PQGGNQSQGTPPPPGKPERPPPQGGNQSHR--PP 135

Query: 358 PPPPAPETYEEYGYDDTYAEQSYEGY-EGYYSQSQGDSEYYDYGHGEVQDSYEAYGQDDW 416
           PPP  PE     G + +     + G  EG   Q    S       G+ Q      G    
Sbjct: 136 PPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQ------GPPQQ 189

Query: 417 NGTRPSLKAPPARP 430
            G +P    PP +P
Sbjct: 190 EGNKPQGPPPPGKP 203



 Score = 36.2 bits (82), Expect = 0.061
 Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 15/97 (15%)

Query: 278 PEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPP-----RGALVRGTPVR--GAITRGATVT 330
           P P +    P +G   +  PPP P G+  GPP     +    R  P +  G   +     
Sbjct: 136 PPPGKPERPPPQGGNQSQGPPPHP-GKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKP 194

Query: 331 RGVPPPPTVRGAPA-------PRARTAGIQRIPLPPP 360
           +G PPP   +G P        P+A  AG  + P PPP
Sbjct: 195 QGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPP 231



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 14/72 (19%)

Query: 23 PSGAHPSVRQTPSRQPPLPHRSRG----GGGGSRGGARASPATQPPPLLPPSATGPDA-- 76
          P G  P     P R PP P + +G    GG  S+G         PPP   P    P    
Sbjct: 36 PEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQG--------PPPPPGKPEGRPPQGGN 87

Query: 77 TVGGPAPTPLLP 88
             GP P P  P
Sbjct: 88 QSQGPPPHPGKP 99


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 31/87 (35%), Positives = 33/87 (37%), Gaps = 9/87 (10%)

Query: 278 PEPSRG-RGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPP 336
           P P R  RG P     AAPPP P P      PP   +    P R      A  T    P 
Sbjct: 109 PAPPRAPRGAPAAAAAAAPPPTPAPP-----PPPAPVAAAAPARAPRAAAAAATAPPSPG 163

Query: 337 PTVRGAPAPRARTAGIQRIPLPPPPAP 363
           P     P PRA+ A     P P P AP
Sbjct: 164 PA---QPGPRAQRAAPLAAPPPAPAAP 187



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 33/101 (32%), Positives = 36/101 (35%), Gaps = 13/101 (12%)

Query: 263 ICQEQFLELSYLNGVPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGA 322
           I Q   L +SY   +   +  R  P R RGA PP PP         PRGA     P   A
Sbjct: 77  IQQRAVLRVSYKGSISYRNAARVQPPR-RGATPPAPP-------RAPRGA-----PAAAA 123

Query: 323 ITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAP 363
                      PPP  V  A   RA  A       PP P P
Sbjct: 124 AAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGP 164



 Score = 31.6 bits (70), Expect = 1.5
 Identities = 23/87 (26%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 34  PSRQPPLPHRSRGGGGGSRGGARASPATQPPPLLPPSATGP----DATVGGPAPTPLLPP 89
           P+  PP P         +R    A+ A   PP   P+  GP     A +  P P P  PP
Sbjct: 129 PTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPP 188

Query: 90  SATASVKMEPENKYLPELMAEKDSLDP 116
           +        P     P + A +  L P
Sbjct: 189 AVAPPA--GPRRAPPPAVAAREPPLPP 213



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 32  QTPSR--QPPLPHRSRGGGGGSRGGARASPA-TQPPPLLPPSATGPDATVGGPAPTPLLP 88
           Q P R   PP P R+  G   +   A   P    PPP  P +A  P       A     P
Sbjct: 100 QPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAP 159

Query: 89  PS 90
           PS
Sbjct: 160 PS 161



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 26/94 (27%), Positives = 31/94 (32%), Gaps = 9/94 (9%)

Query: 9   ARMSRSSGRSGSMDPSG--AHPSVRQ-------TPSRQPPLPHRSRGGGGGSRGGARASP 59
           AR  R++  + +  PS   A P  R         P   P  P       G  R    A  
Sbjct: 146 ARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVA 205

Query: 60  ATQPPPLLPPSATGPDATVGGPAPTPLLPPSATA 93
           A +PP   PP    P      P P P  PP   A
Sbjct: 206 AREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGA 239


>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
          Length = 1096

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 50/168 (29%), Positives = 67/168 (39%), Gaps = 30/168 (17%)

Query: 205 DKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDIC 264
           +KAK EE     + K A  +     F E F    EA A +    E++K+ L  ++     
Sbjct: 486 NKAKVEE----SEQKAAEFSKK---FDEEFTARQEAQAELQKRDEKIKE-LEAEIQQLRT 537

Query: 265 QEQFLELSYLNGVPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGAL--VRGTPVRGA 322
           Q Q L  S  +G+P P     +P  G    PP PP+P G  + PP   L  + G P    
Sbjct: 538 QAQVLSSS--SGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIP---- 591

Query: 323 ITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYG 370
                      PPPP + G P P     G+     PPPP       YG
Sbjct: 592 ---------PPPPPPLLFGGPPPPPPLGGV-----PPPPGISLNLPYG 625



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 30/104 (28%), Positives = 37/104 (35%), Gaps = 13/104 (12%)

Query: 15  SGRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGG----GGSRGGARASPATQPPPLL--- 67
           S  SG   P  A P     P   PP P    G           G    P   PPPLL   
Sbjct: 543 SSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGG 602

Query: 68  PPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEK 111
           PP    P   +GG  P P +  S      M+ +  Y PE+  ++
Sbjct: 603 PP----PPPPLGGVPPPPGI--SLNLPYGMKQKKMYKPEVSMKR 640


>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
          Length = 1101

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 50/168 (29%), Positives = 67/168 (39%), Gaps = 30/168 (17%)

Query: 205 DKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDIC 264
           +KAK EE     + K A  +     F E F    EA A +    E++K+ L  ++     
Sbjct: 486 NKAKVEE----SEQKAAEFSKK---FDEEFTARQEAQAELQKRDEKIKE-LEAEIQQLRT 537

Query: 265 QEQFLELSYLNGVPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGAL--VRGTPVRGA 322
           Q Q L  S  +G+P P     +P  G    PP PP+P G  + PP   L  + G P    
Sbjct: 538 QAQVLSSS--SGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIP---- 591

Query: 323 ITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYG 370
                      PPPP + G P P     G+     PPPP       YG
Sbjct: 592 ---------PPPPPPLLFGGPPPPPPLGGV-----PPPPGISLNLPYG 625



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 30/104 (28%), Positives = 37/104 (35%), Gaps = 13/104 (12%)

Query: 15  SGRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGG----GGSRGGARASPATQPPPLL--- 67
           S  SG   P  A P     P   PP P    G           G    P   PPPLL   
Sbjct: 543 SSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGG 602

Query: 68  PPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEK 111
           PP    P   +GG  P P +  S      M+ +  Y PE+  ++
Sbjct: 603 PP----PPPPLGGVPPPPGI--SLNLPYGMKQKKMYKPEVSMKR 640


>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
           sapiens]
          Length = 505

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 29/81 (35%), Positives = 31/81 (38%), Gaps = 18/81 (22%)

Query: 287 PVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRG-APAP 345
           P   RG  PPPPP P   G  PP        P RG         RG PPPP  R    AP
Sbjct: 280 PPPSRGGPPPPPPPPHNSGPPPP--------PARG---------RGAPPPPPSRAPTAAP 322

Query: 346 RARTAGIQRIPLPPPPAPETY 366
                    + +PPPP    Y
Sbjct: 323 PPPPPSRPSVAVPPPPPNRMY 343



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 32/96 (33%), Positives = 35/96 (36%), Gaps = 27/96 (28%)

Query: 278 PEPSRGRGVPV----RGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGV 333
           P P+RGRG P     R   AAPPPPP  R     PP                     R  
Sbjct: 301 PPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPP-----------------PPPNRMY 343

Query: 334 PPPPTV------RGAPAPRARTAGIQRIPLPPPPAP 363
           PPPP         G P P     G+  +  PPPP P
Sbjct: 344 PPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPP 379



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 31/88 (35%), Positives = 37/88 (42%), Gaps = 6/88 (6%)

Query: 278 PEPSRGRGVPVRG--RGAAPPPPPVPRGRGVGPPRGALV-RGTPVRGAITRGATVTRGVP 334
           P PSRG   P       + PPPPP  RGRG  PP  +      P     +R +      P
Sbjct: 280 PPPSRGGPPPPPPPPHNSGPPPPPA-RGRGAPPPPPSRAPTAAPPPPPPSRPSVAVP--P 336

Query: 335 PPPTVRGAPAPRARTAGIQRIPLPPPPA 362
           PPP     P P A  +     P PPPP+
Sbjct: 337 PPPNRMYPPPPPALPSSAPSGPPPPPPS 364



 Score = 37.0 bits (84), Expect = 0.036
 Identities = 28/79 (35%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 28  PSVRQTPSRQPPLPHRS-------RGGGGGSRGGARASPATQPPPLLPPSATGPDATVGG 80
           P  R  P   PP PH S       RG G      +RA  A  PPP  PPS   P   V  
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPP--PPSR--PSVAVPP 336

Query: 81  PAPTPLLPPSATASVKMEP 99
           P P  + PP   A     P
Sbjct: 337 PPPNRMYPPPPPALPSSAP 355



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 24  SGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPATQPPP----LLPPSATGPDATVG 79
           SG  P   +     PP P R+          +R S A  PPP      PP    P +   
Sbjct: 297 SGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPS 356

Query: 80  GPAPTP 85
           GP P P
Sbjct: 357 GPPPPP 362


>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
          Length = 378

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 31/84 (36%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 283 GRGVPVRGRGAAPPPPPVPRGRGVGPPRG-ALVRGTPVRGAITRGATVTRGVPPPPTVRG 341
           G G P  GRGA PPPPP        PP G    +G P         +   G PPPP  + 
Sbjct: 245 GYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQF 304

Query: 342 AP---APRARTAGIQRIPLPPPPA 362
           AP    P   T G   +  PPPP+
Sbjct: 305 APPGVPPPPATPGAAPLAFPPPPS 328



 Score = 32.7 bits (73), Expect = 0.68
 Identities = 58/280 (20%), Positives = 92/280 (32%), Gaps = 63/280 (22%)

Query: 174 GKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEV 233
           G+ + P+  T + +Q E         KG   D +K  ++  GG P       +L  + + 
Sbjct: 77  GRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCG-ETELREYFKK 135

Query: 234 FGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLN------------------ 275
           FG   E   +     +  + F      D+   +Q + + + +                  
Sbjct: 136 FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKS 195

Query: 276 ---GVPEPSR--GRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVT 330
              G P  S+   R VP    G A  PPP  + +G GP           +G         
Sbjct: 196 QAPGQPGASQWGSRVVPNAANGWAGQPPPTWQ-QGYGP-----------QGMWVPAGQAI 243

Query: 331 RGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYAEQSYEGYEGYYSQS 390
            G  PPP  RGA               PPPP P T     Y  +     +   +G + Q 
Sbjct: 244 GGYGPPPAGRGA---------------PPPPPPFT----SYIVSTPPGGFPPPQG-FPQG 283

Query: 391 QGDSEYYDYGHGEVQDSYEAYGQDDWNGTRPSLKAPPARP 430
            G    + +G+G      + +         P +  PPA P
Sbjct: 284 YGAPPQFSFGYGPPPPPPDQFAP-------PGVPPPPATP 316


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 32/86 (37%), Positives = 35/86 (40%), Gaps = 19/86 (22%)

Query: 278 PEPSRGRGVPVRGRGAAPPPPPVPRGR-GVGPPRGALVRGTPVRGAITRGATVTRGVPPP 336
           P P   RG P  GRG  PPPPP   GR G  PP      G P              +PPP
Sbjct: 351 PPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPP--------------MPPP 396

Query: 337 PTVRGAPAPRARTAGIQRIPLPPPPA 362
           P     P P   ++G    P P PPA
Sbjct: 397 P----PPPPPPPSSGNGPAPPPLPPA 418



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 38/97 (39%), Positives = 42/97 (43%), Gaps = 23/97 (23%)

Query: 278 PEPSRGRGV----PVRG--RGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTR 331
           P PSRG       P+ G  +G + P PPVP G    PP     RG P  G         R
Sbjct: 317 PPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTP---RGPPPPG---------R 364

Query: 332 GVPPPP----TVRGAPAPRART-AGIQRIPLPPPPAP 363
           G PPPP    T R  P P     AG   +P PPPP P
Sbjct: 365 GGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPP 401



 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 288 VRGRGAAPPPPPVPRGRGVGPPRGALVRGT--------PVRGAITRGATVTRGVPPPPTV 339
           +R +   PPPPP  RG G   PR  +V G         PV   I       RG  PPP  
Sbjct: 307 MRRQEPLPPPPPPSRG-GNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRG--PPPPG 363

Query: 340 RGAPAPRARTAGIQRIPLPPPP 361
           RG P P    A  +  PLPPPP
Sbjct: 364 RGGPPPPPPPATGRSGPLPPPP 385



 Score = 37.0 bits (84), Expect = 0.036
 Identities = 36/144 (25%), Positives = 46/144 (31%), Gaps = 27/144 (18%)

Query: 23  PSGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPATQPPPLLPPSATGPDATVGGPA 82
           P G  P  R  P   PP      G       GA   P   PPP  PP    P ++  GPA
Sbjct: 356 PRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPP----PPSSGNGPA 411

Query: 83  PTPLLPPSATA-----------------------SVKMEPENKYLPELMAEKDSLDPSFT 119
           P PL P    A                            PE+  L       + L  +  
Sbjct: 412 PPPLPPALVPAGGLAPGGGRGALLDQIRQGIQLNKTPGAPESSALQPPPQSSEGLVGALM 471

Query: 120 HAMQLLTAEIEKIQKGDSKKDDEE 143
           H MQ  +  I    +G+ +  DE+
Sbjct: 472 HVMQKRSRAIHSSDEGEDQAGDED 495



 Score = 32.7 bits (73), Expect = 0.68
 Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 21/81 (25%)

Query: 277 VPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGP--------PRGALVRGTPVRGAI----- 323
           +P P  G G P       PPPPP   G G  P        P G L  G   RGA+     
Sbjct: 381 LPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGG-RGALLDQIR 439

Query: 324 -------TRGATVTRGVPPPP 337
                  T GA  +  + PPP
Sbjct: 440 QGIQLNKTPGAPESSALQPPP 460



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 24/95 (25%)

Query: 21  MDPSGAHPSVRQTPSRQ---PPLPHRSRGGG--------GGSRGGARASPATQ-----PP 64
           ++  G   +VRQ   RQ   PP P  SRGG         GG++G +   P        PP
Sbjct: 294 IEDQGGLEAVRQEMRRQEPLPPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPP 353

Query: 65  PLL---PPSATG-----PDATVGGPAPTPLLPPSA 91
           P     PP   G     P    G   P P  PP A
Sbjct: 354 PTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGA 388


>gi|147902746 MEX3A protein [Homo sapiens]
          Length = 520

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 48/207 (23%), Positives = 77/207 (37%), Gaps = 49/207 (23%)

Query: 37  QPPLPHRSRGGGGGSRGGARASPATQPPPLLPPS-ATGPDATVGGPA---PTPLLPPSAT 92
           +PP P     GGGG  GGA A PA  P P  PP  A  P A    PA   P P   P   
Sbjct: 52  EPPAPTAGEDGGGGG-GGAPAQPAAPPQPAPPPPPAAPPAAPTAAPAAQTPQPPTAPKGA 110

Query: 93  ASVKM-----EPENKYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSK--------- 138
           +  K+     E E +        +    P+  H  +++  +  KI+   +K         
Sbjct: 111 SDAKLCALYKEAELRLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPV 170

Query: 139 KDDEENYLDLFSHKNMKLKERVLIPVKQY------------------------------P 168
           + +E  ++     +++    R +I   ++                               
Sbjct: 171 RGEEPVFMVTGRREDVATARREIISAAEHFSMIRASRNKSGAAFGVAPALPGQVTIRVRV 230

Query: 169 KFNFVGKILGPQGNTIKRLQEETGAKI 195
            +  VG ++GP+G TIKR+Q++T   I
Sbjct: 231 PYRVVGLVVGPKGATIKRIQQQTNTYI 257


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.135    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,473,281
Number of Sequences: 37866
Number of extensions: 1733295
Number of successful extensions: 20747
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 1190
Number of HSP's that attempted gapping in prelim test: 12335
Number of HSP's gapped (non-prelim): 7889
length of query: 443
length of database: 18,247,518
effective HSP length: 105
effective length of query: 338
effective length of database: 14,271,588
effective search space: 4823796744
effective search space used: 4823796744
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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