QKI 30072

Name: QKI	Sequence: fasta or formatted (319aa)		NCBI GI: 45827708
Description: quaking homolog, KH domain RNA binding isoform HQK-6		Referenced in: Oligodendrocytes and Myelin Capping and Splicing
Other entries for this name: alt prot [341aa] quaking homolog, KH domain RNA binding isoform HQK-5 alt prot [325aa] quaking homolog, KH domain RNA binding isoform HQK-7 alt prot [319aa] quaking homolog, KH domain RNA binding isoform HQK-7B
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 29 2 C cysteine 0.6 2 1 D aspartate 3.8 12 1 E glutamate 8.5 27 2 F phenylalanine 1.9 6 1 G glycine 6.6 21 1 H histidine 1.3 4 1 I isoleucine 5.6 18 2 K lysine 7.5 24 3 L leucine 10.3 33 2 M methionine 4.1 13 1 N asparagine 4.1 13 1 P proline 10.3 33 2 Q glutamine 3.1 10 1 R arginine 4.7 15 1 S serine 3.4 11 2 T threonine 6.3 20 1 V valine 5.3 17 1 W tryptophan 0.3 1 1 Y tyrosine 3.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 quaking homolog, KH domain RNA binding isoform HQK-6... QKI 0.979 quaking homolog, KH domain RNA binding isoform HQK-7... QKI 0.976 quaking homolog, KH domain RNA binding isoform HQK-5... QKI 0.972 quaking homolog, KH domain RNA binding isoform HQK-7... KHDRBS2 0.189 KH domain-containing, RNA-binding, signal transduct... KHDRBS3 0.182 KH domain containing, RNA binding, signal transductio... KHDRBS1 0.177 KH domain containing, RNA binding, signal transductio... SF1 0.122 splicing factor 1 isoform 3 SF1 0.122 splicing factor 1 isoform 2 SF1 0.122 splicing factor 1 isoform 1 KIAA0907 0.031 hypothetical protein LOC22889 MAPK7 0.024 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.024 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.024 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.024 mitogen-activated protein kinase 7 isoform 2 GLTSCR1 0.023 glioma tumor suppressor candidate region gene 1 [Ho... NFIB 0.023 nuclear factor I/B SFPQ 0.021 splicing factor proline/glutamine rich (polypyrimidin... TCERG1 0.021 transcription elongation regulator 1 isoform 2 [Homo... TCERG1 0.021 transcription elongation regulator 1 isoform 1 [Homo... RIN3 0.020 Ras and Rab interactor 3 BPTF 0.020 bromodomain PHD finger transcription factor isoform ... BPTF 0.020 bromodomain PHD finger transcription factor isoform ... NUMBL 0.020 numb homolog (Drosophila)-like NACA 0.020 nascent polypeptide-associated complex alpha subuni... AMOT 0.018 angiomotin isoform 2 AMOT 0.018 angiomotin isoform 1 BCORL1 0.018 BCL6 co-repressor-like 1 FMN2 0.016 formin 2 IRX5 0.016 iroquois homeobox protein 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.