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Search of human proteins with 5729781
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5729781 complexin 1 [Homo sapiens]
(134 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5729781 complexin 1 [Homo sapiens] 265 6e-72
gi|56550065 complexin 2 [Homo sapiens] 228 1e-60
gi|5729783 complexin 2 [Homo sapiens] 228 1e-60
gi|71725345 complexin 3 [Homo sapiens] 59 9e-10
gi|31795561 complexin 4 [Homo sapiens] 49 2e-06
gi|148746183 ubiquitin specific protease 35 [Homo sapiens] 47 6e-06
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 42 2e-04
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 42 2e-04
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 41 3e-04
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 40 7e-04
gi|148746195 trichohyalin [Homo sapiens] 40 7e-04
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 39 0.001
gi|4759276 RNA, U3 small nucleolar interacting protein 2 [Homo s... 39 0.002
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 39 0.002
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 38 0.002
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 38 0.002
gi|22758136 MAP7 domain containing 2 [Homo sapiens] 38 0.002
gi|221219020 NYD-SP11 protein [Homo sapiens] 38 0.003
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 38 0.003
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 38 0.003
gi|55741655 anoctamin 8 [Homo sapiens] 37 0.004
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 37 0.004
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 37 0.004
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 37 0.004
gi|13027602 DDRGK domain containing 1 [Homo sapiens] 37 0.004
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 37 0.004
gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo sap... 37 0.004
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 37 0.005
gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens] 37 0.005
gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens] 37 0.005
>gi|5729781 complexin 1 [Homo sapiens]
Length = 134
Score = 265 bits (678), Expect = 6e-72
Identities = 134/134 (100%), Positives = 134/134 (100%)
Query: 1 MEFVMKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAERE 60
MEFVMKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAERE
Sbjct: 1 MEFVMKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAERE 60
Query: 61 AVRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTV 120
AVRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTV
Sbjct: 61 AVRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTV 120
Query: 121 IKYLPGPLQDMLKK 134
IKYLPGPLQDMLKK
Sbjct: 121 IKYLPGPLQDMLKK 134
>gi|56550065 complexin 2 [Homo sapiens]
Length = 134
Score = 228 bits (581), Expect = 1e-60
Identities = 113/134 (84%), Positives = 123/134 (91%)
Query: 1 MEFVMKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAERE 60
M+FVMKQALGGATKDMGKMLGG+EEKDPDA KKEEERQEALRQ EEERKAK+A+MEAERE
Sbjct: 1 MDFVMKQALGGATKDMGKMLGGEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAERE 60
Query: 61 AVRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTV 120
VRQ IRDKYG+KKKEE+EAE +AA+E EGSLTRPKKAIP GCGDE EEE+ESILDTV
Sbjct: 61 KVRQQIRDKYGLKKKEEKEAEEKAALEQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTV 120
Query: 121 IKYLPGPLQDMLKK 134
+KYLPGPLQDM KK
Sbjct: 121 LKYLPGPLQDMFKK 134
>gi|5729783 complexin 2 [Homo sapiens]
Length = 134
Score = 228 bits (581), Expect = 1e-60
Identities = 113/134 (84%), Positives = 123/134 (91%)
Query: 1 MEFVMKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAERE 60
M+FVMKQALGGATKDMGKMLGG+EEKDPDA KKEEERQEALRQ EEERKAK+A+MEAERE
Sbjct: 1 MDFVMKQALGGATKDMGKMLGGEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAERE 60
Query: 61 AVRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTV 120
VRQ IRDKYG+KKKEE+EAE +AA+E EGSLTRPKKAIP GCGDE EEE+ESILDTV
Sbjct: 61 KVRQQIRDKYGLKKKEEKEAEEKAALEQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTV 120
Query: 121 IKYLPGPLQDMLKK 134
+KYLPGPLQDM KK
Sbjct: 121 LKYLPGPLQDMFKK 134
>gi|71725345 complexin 3 [Homo sapiens]
Length = 158
Score = 59.3 bits (142), Expect = 9e-10
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 1 MEFVMKQALGGATKDMGKMLGGDEEK---DPDAAKKE-------EERQEALRQAEEERKA 50
M F++K +GG K++ LGG E+K D AA+ + EE Q+ L + + ER A
Sbjct: 1 MAFMVKTMVGGQLKNLTGSLGGGEDKGDGDKSAAEAQGMSREEYEEYQKQLVEEKMERDA 60
Query: 51 KYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVE 110
++ + +AER +R RDKY + K E E++ Q A G + P++ D E
Sbjct: 61 QFTQRKAERATLRSHFRDKYRLPKNETDESQIQMA-----GGDVELPRELAKMIEEDTEE 115
Query: 111 EEDESILDTVIKYLPG 126
EE+++ + + LPG
Sbjct: 116 EEEKASVLGQLASLPG 131
>gi|31795561 complexin 4 [Homo sapiens]
Length = 160
Score = 48.5 bits (114), Expect = 2e-06
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 1 MEFVMKQALGGATKDMGKMLGGDEEK------DPDAAK-----KEEERQEALRQAEEERK 49
M F+MK + K++G G +E K DP AA+ + EE Q+ + + + ER
Sbjct: 1 MAFLMKSMISNQVKNLGFGGGSEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERD 60
Query: 50 AKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEV 109
A + + +AER +R +R+KY + K E E + Q A + + P+ D+
Sbjct: 61 AAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGD-----DVDLPEDLRKMVDEDQE 115
Query: 110 EEEDESILDTVIKYLPGPLQDMLKK 134
EEED+ + I+ L D +K+
Sbjct: 116 EEEDKDSILGQIQNLQNMDLDTIKE 140
>gi|148746183 ubiquitin specific protease 35 [Homo sapiens]
Length = 1018
Score = 46.6 bits (109), Expect = 6e-06
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 18 KMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEE 77
K GG ++ ++EE ++E + E + + + E ERE + ++ ++K+ E
Sbjct: 665 KEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETE 724
Query: 78 REAEAQAAMEANSEGSLTRPKKAIPPG---CGDEVEEEDESILDTVIKYL 124
+EAE + E +S G+ T P AIP G CG E S+LD V +L
Sbjct: 725 KEAEQE--KEEDSLGAGTHPDAAIPSGERTCG---SEGSRSVLDLVNYFL 769
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 41.6 bits (96), Expect = 2e-04
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 23 DEEKDPDAAKKEEERQEALRQ---AEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEERE 79
+EE + + E+E QEA R ++++RK A + +E + ++ + +KKKEE+E
Sbjct: 335 EEESEDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKE 394
Query: 80 AEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
E + M+ E R K G+ +EEDE
Sbjct: 395 EEEEEEMKQKEEEEEIRNKNEEE---GESKDEEDE 426
Score = 30.4 bits (67), Expect = 0.44
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 13 TKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGI 72
+KD K + +++ + ++E +++E +++ EE K E E E ++Q ++ I
Sbjct: 359 SKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEE-------KEEEEEEEMKQK-EEEEEI 410
Query: 73 KKKEEREAEAQAAMEANSE-GSLTRPKKAIPPGCGDEVEEEDESILD 118
+ K E E E++ + + + G + PG + E +E LD
Sbjct: 411 RNKNEEEGESKDEEDEDEDGGQKPEGEPQQDPGTEETYGEVEEEPLD 457
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 41.6 bits (96), Expect = 2e-04
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 28/118 (23%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEERE--- 79
+E++ + A+ E+E QE L++ +EE +A+ ++ EAER+ + R+K+ ++++ER+
Sbjct: 654 EEQEAREKAQAEQEEQERLQKQKEEAEAR-SREEAERQRLE---REKHFQQQEQERQERR 709
Query: 80 ------------------AEAQAAMEANSEGSLTRPKKAI---PPGCGDEVEEEDESI 116
+ Q + EAN+ GS P KA+ PG E +++E I
Sbjct: 710 KRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARSPGLQKEAVQKEEPI 767
Score = 36.2 bits (82), Expect = 0.008
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 31 AKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANS 90
A+++ ER+E R+ + ER + + + REA + R+ +++EE+EA +A E
Sbjct: 610 AREQREREEQERRLQAERDKRMREEQLAREAEARAEREAEA-RRREEQEAREKAQAEQEE 668
Query: 91 EGSLTRPKKAIPPGCGDEVEEE 112
+ L + K+ +E E +
Sbjct: 669 QERLQKQKEEAEARSREEAERQ 690
Score = 33.9 bits (76), Expect = 0.040
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 36 ERQEALRQ-AEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANS 90
+R+EA R AE+ R+A+ + E+E Q RDK +++ REAEA+A EA +
Sbjct: 595 DREEATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLAREAEARAEREAEA 650
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 41.2 bits (95), Expect = 3e-04
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 22 GDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
G +E++ + K+ ER++ R+ E+ERK + +G ++K G +KKEERE +
Sbjct: 51 GKKERESERKKERREREKRKREREKERKRE------------RGKKEKKGERKKEERERK 98
Query: 82 AQAAMEANSEGSLTRPKK 99
+ + N EG +K
Sbjct: 99 KRRREKENKEGEEKEKRK 116
Score = 37.4 bits (85), Expect = 0.004
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 22 GDEEKDPDAAKKEEERQEALRQAE------EERKAKYAKMEAEREAVRQGIRDKYGIKKK 75
G +EK + K+E ER++ R+ E +E++ K K E R + R++ +K+
Sbjct: 82 GKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKR 141
Query: 76 EEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
EER+ + E E KK G++ EE E
Sbjct: 142 EERKERERKKEEREKERERKERKKRERKQVGEKEEERKE 180
Score = 36.2 bits (82), Expect = 0.008
Identities = 17/69 (24%), Positives = 38/69 (55%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQ 83
E ++ + K+E E++ + ++E+K + K E ER+ R+ +K G +K++ ++ E +
Sbjct: 62 ERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKK 121
Query: 84 AAMEANSEG 92
+ EG
Sbjct: 122 ERGRTSKEG 130
Score = 35.0 bits (79), Expect = 0.018
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
K+ G+ +E++ +K EER+E R+ EE K + K +RE R + G K
Sbjct: 121 KERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRE------RKQVGEK 174
Query: 74 KKEEREAE 81
++E +E E
Sbjct: 175 EEERKEKE 182
Score = 35.0 bits (79), Expect = 0.018
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 24 EEKDPDAAKKEEERQEALR--QAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
EE++ + +KE +++E + + EEERK K K +RE R+ + + K++ ER+ E
Sbjct: 152 EEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKE 211
Query: 82 AQAAMEANSE 91
+ E E
Sbjct: 212 RKKKEERKKE 221
Score = 34.7 bits (78), Expect = 0.024
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 32 KKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANSE 91
K+ E ++E R+ +ER+ K + E ERE + R++ + +KEE E + E
Sbjct: 131 KERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRE 190
Query: 92 GSLTRPKK 99
+ KK
Sbjct: 191 RNRKERKK 198
Score = 34.7 bits (78), Expect = 0.024
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 18 KMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEE 77
K +G EE+ + +KE +++E R +E +K + K ER+ R KKKEE
Sbjct: 169 KQVGEKEEERKEKERKERKKRE--RNRKERKKERERKERRERKKER---------KKKEE 217
Query: 78 REAEAQAAMEAN 89
R+ E Q + N
Sbjct: 218 RKKERQKDRQTN 229
Score = 30.4 bits (67), Expect = 0.44
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 11 GATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKY--------AKMEAEREAV 62
G T GK EE+ + +KE ER++ R+ E ERK + K E +E
Sbjct: 124 GRTSKEGKERERKEERKREE-RKERERKKEEREKERERKERKKRERKQVGEKEEERKEKE 182
Query: 63 RQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKK 99
R+ + + +K+ ++E E + E E +K
Sbjct: 183 RKERKKRERNRKERKKERERKERRERKKERKKKEERK 219
Score = 29.3 bits (64), Expect = 0.99
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 25 EKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEERE 79
E++ KKE ER+E + +E +K + K E +++ + G ++++ER+
Sbjct: 190 ERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERK 244
Score = 28.9 bits (63), Expect = 1.3
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 23 DEEKDPDAAKKEE--ERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
++E+ + KKE+ ER++ R+ ++ R+ K K E+E ++ + + G KE +E
Sbjct: 74 EKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKER 133
Query: 81 EAQAAMEANSEGSLTRPKK 99
E + + R K+
Sbjct: 134 ERKEERKREERKERERKKE 152
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 39.7 bits (91), Expect = 7e-04
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 13 TKDMGKMLGGDEEKDPDAAKKEEERQEA---LRQAEEERKAKYAKMEAEREAVRQGIRDK 69
++++ K ++ + + KKE+ERQE R+ E ER+ + + E ERE R+ R+K
Sbjct: 278 SREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREK 337
Query: 70 YGIKKKEEREAEAQAAMEANSEGSLTRPKK 99
+K+ ERE E + E R ++
Sbjct: 338 ---EKERERERERDRDRDRTKERDRDRDRE 364
Score = 35.0 bits (79), Expect = 0.018
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEER-KAKYAKMEAEREAVRQGIRDKYGI 72
+D + D KD ++++ +E R+ E ER + + + E ERE R+ R++
Sbjct: 367 RDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERERE 426
Query: 73 K-KKEEREAEAQAAMEANSEGSLTRPKKA 100
K KK +RE + + A E R K+A
Sbjct: 427 KDKKRDREEDEEDAYERRKLERKLREKEA 455
Score = 35.0 bits (79), Expect = 0.018
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 13 TKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGI 72
+ D K EK D ++ E +E R+ E ER+ + + E ERE R+ +DK
Sbjct: 374 SSDRNKDRSRSREKSRDRERERERERERERERERERERERER-EREREREREREKDKKRD 432
Query: 73 KKKEEREAEAQAAME 87
++++E +A + +E
Sbjct: 433 REEDEEDAYERRKLE 447
Score = 30.4 bits (67), Expect = 0.44
Identities = 18/98 (18%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAERE------AVRQGIRDKYGIKKKE 76
+ E++ + ++ E ++ R EE+ + Y + + ER+ A ++ +++ ++K+
Sbjct: 412 EREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKK 471
Query: 77 EREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
RE E +A E + + K + D ++ D+
Sbjct: 472 TREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDD 509
Score = 30.4 bits (67), Expect = 0.44
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 8 ALGGATKDMGKMLGGDE-EKDPDAAKKEEERQEALRQAEEERKAKYAKMEAERE-----A 61
AL +D K + DE ++ + + EE RQ L + + A+ +ME E E
Sbjct: 517 ALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQ 576
Query: 62 VRQGIRDKYGIKKKEEREAEAQAAMEANSE 91
++Q + ++K+E+E + + ME E
Sbjct: 577 IKQEPESEEEEEEKQEKEEKREEPMEEEEE 606
Score = 29.6 bits (65), Expect = 0.76
Identities = 16/77 (20%), Positives = 37/77 (48%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
+ E++ + ++ E +E R+ E ER+ + + + ++ + D Y +K E + E
Sbjct: 394 EREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREK 453
Query: 83 QAAMEANSEGSLTRPKK 99
+AA + + R +K
Sbjct: 454 EAAYQERLKNWEIRERK 470
Score = 27.3 bits (59), Expect = 3.8
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
D+++D + Q+ LR E+E +A + E+E + + IR + + + +AE
Sbjct: 504 DDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEE-IRQRLLAEGHPDPDAEL 562
Query: 83 QAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
Q ME +E +P+ P +E EE+ E
Sbjct: 563 Q-RMEQEAE-RRRQPQIKQEPESEEEEEEKQE 592
Score = 26.9 bits (58), Expect = 4.9
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
+++ + L + DPDA + E QEA R+ + + K + E E E +Q +K
Sbjct: 544 EEIRQRLLAEGHPDPDAELQRME-QEAERRRQPQIKQEPESEEEEEE--KQEKEEKREEP 600
Query: 74 KKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTVIKYLPGPLQ 129
+EE E E + ++ + P + G DES +I + P Q
Sbjct: 601 MEEEEEPEQKPCLKPTLRPISSAPSVSSASGNATPNTPGDESPCGIIIPHENSPDQ 656
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 39.7 bits (91), Expect = 7e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 KKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANSE 91
++EE RQ+ LR+ ++ER+ + K E E E + Q +K++ E E Q E E
Sbjct: 638 EQEERRQQQLRREQQERREQRLKREEEEERLEQ------RLKREHEEERREQELAEEEQE 691
Query: 92 GSLTRPKKAIP 102
+ R K IP
Sbjct: 692 QARERIKSRIP 702
Score = 36.6 bits (83), Expect = 0.006
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 25 EKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEER------ 78
E++ + ++E +Q+ R EEER+ ++ K+E E +Q R++ +++EER
Sbjct: 461 EEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLK 520
Query: 79 --EAEAQAAMEANSEGSLTRPKK 99
E E + SE L R ++
Sbjct: 521 RQEEEERLQQRLRSEQQLRREQE 543
Score = 36.2 bits (82), Expect = 0.008
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 25 EKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQA 84
E+ ++EE R++ LR+ +EER+ + + E E E Q +R + +++E RE + +
Sbjct: 323 EQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRRE---QEEERREQQLRR 379
Query: 85 AMEANSEGSLTRPKK 99
+ E L R ++
Sbjct: 380 EQQLRREQQLRREQQ 394
Score = 35.8 bits (81), Expect = 0.011
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 23 DEEKDPDAAKKEEER--QEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
+E ++ +++EER Q+ R+ EEER+ + + E E E Q +R + ++++++
Sbjct: 332 EERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQLRR 391
Query: 81 EAQAAME 87
E Q E
Sbjct: 392 EQQLRRE 398
Score = 35.8 bits (81), Expect = 0.011
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
+E +D ++EE RQ+ L++ +EER + K E E E + Q R + +K++E E
Sbjct: 572 EERRDQLLKREEERRQQRLKREQEERLEQRLKRE-EVERLEQEERREQRLKREEPEEERR 630
Query: 83 QAAMEANSE 91
Q +++ +
Sbjct: 631 QQLLKSEEQ 639
Score = 32.7 bits (73), Expect = 0.089
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 24 EEKDPDAAKKEEE-------RQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKE 76
EE+ K+EEE R++ L++ +EER+ + K E ER R + ++++
Sbjct: 543 EERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRL 602
Query: 77 EREAEAQAAMEANSEGSLTR 96
+RE + E E L R
Sbjct: 603 KREEVERLEQEERREQRLKR 622
Score = 32.3 bits (72), Expect = 0.12
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 18 KMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEE 77
+ L ++E++ K E+ER+E + E+E + + K E E E Q R K +K+ +E
Sbjct: 423 QQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQE-RRKQQLKRDQE 481
Query: 78 RE 79
E
Sbjct: 482 EE 483
Score = 32.3 bits (72), Expect = 0.12
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 32 KKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANSE 91
+++EER+E L + EEE++ + + E + ++ RD+ +++E R+ + E E
Sbjct: 540 REQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLE 599
Query: 92 GSLTR 96
L R
Sbjct: 600 QRLKR 604
Score = 32.3 bits (72), Expect = 0.12
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQ 83
E ++ +++EER++ L + EEER+ + K E E ++ R++ ++EER +
Sbjct: 561 ERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRL 620
Query: 84 AAMEANSE 91
E E
Sbjct: 621 KREEPEEE 628
Score = 31.2 bits (69), Expect = 0.26
Identities = 17/94 (18%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 14 KDMGKMLGGDEEKDPDAAKKE--------EERQEALRQAEEERKAKYAKMEAEREAVRQG 65
+D+ +LG +E+D + ++ E ++ R+ ++E K + K + E++ +R+
Sbjct: 1265 QDLQHLLGEQQERDREQERRRWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQLLREE 1324
Query: 66 IRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKK 99
+K ++ + + E + ++ E L R ++
Sbjct: 1325 REEKRRRQETDRKFREEEQLLQEREEQPLRRQER 1358
Score = 30.4 bits (67), Expect = 0.44
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 18 KMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEE 77
++LG + EK ++++ R+E Q EEE+ + ERE R+ ++ KK E
Sbjct: 972 QLLGEEPEKRRRQEREKKYREEEELQQEEEQ-----LLREEREKRRRQEWERQYRKKDEL 1026
Query: 78 REAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESIL 117
++ E Q E + L ++ +E+++E+E +L
Sbjct: 1027 QQEEEQLLREEREKRRLQERERQYRE--EEELQQEEEQLL 1064
Score = 28.9 bits (63), Expect = 1.3
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 32 KKEEER---QEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEA 88
K+EEER QE R+ +E R+ + + E + ++ R++ +++EE E Q E
Sbjct: 309 KQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQ 368
Query: 89 NSE 91
E
Sbjct: 369 EEE 371
Score = 28.9 bits (63), Expect = 1.3
Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVR-QGIRDKYGIKKKEEREAEA 82
E ++ +++EER+E + +EE + ++ +E++ R Q R + +K++EE+ E
Sbjct: 501 ERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQ 560
Query: 83 Q 83
+
Sbjct: 561 E 561
Score = 28.9 bits (63), Expect = 1.3
Identities = 12/48 (25%), Positives = 28/48 (58%)
Query: 32 KKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEERE 79
+K E ++ LR+ E ERK + + R+ + + R++ ++++ E+E
Sbjct: 1691 RKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQE 1738
Score = 28.1 bits (61), Expect = 2.2
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 24 EEKDPDAAKKEEERQEALR--QAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
E ++ + ++ R++ LR Q EE R+ + + E + +Q R + +++++E E
Sbjct: 289 ERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERRE 348
Query: 82 AQAAMEANSE 91
Q E E
Sbjct: 349 QQLRREQEEE 358
Score = 28.1 bits (61), Expect = 2.2
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 23 DEEKDPDAAKKEEE-------RQEALRQAEEERKAKYAKMEAEREAVRQGIR--DKYGIK 73
++E+ K+E+E R+E + E+ER+ + K + E E + ++ ++ +
Sbjct: 439 EQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERRE 498
Query: 74 KKEEREAEAQAAMEANSEGSLTRPKK 99
++E RE + + E E L R ++
Sbjct: 499 QQERREQQLRREQEERREQRLKRQEE 524
Score = 28.1 bits (61), Expect = 2.2
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 24 EEKDPDAAKKEEER---------QEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKK 74
EE+ K++EE ++ LR+ +EER+ + K E E+ + Q R++ ++
Sbjct: 512 EERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKR-LEQERREQRLKRE 570
Query: 75 KEEREAEAQAAMEANSEGSLTRPKK 99
+EER + E + L R ++
Sbjct: 571 QEERRDQLLKREEERRQQRLKREQE 595
Score = 28.1 bits (61), Expect = 2.2
Identities = 14/92 (15%), Positives = 41/92 (44%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
+EE+ ++ ER++ L+ EEE + + + + + G+++ ++ +E+ +
Sbjct: 813 EEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQRRDQ 872
Query: 83 QAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
+ + E R P +++ +E +
Sbjct: 873 KWRWQLEEERKRRRHTLYAKPALQEQLRKEQQ 904
Score = 27.7 bits (60), Expect = 2.9
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 6 KQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQG 65
K AL + ++L +EE+ + EER++ RQ +E + + +++ E E + +
Sbjct: 892 KPALQEQLRKEQQLLQEEEEE-----LQREEREKRRRQEQERQYREEEQLQQEEEQLLRE 946
Query: 66 IRDK---------YGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESI 116
R+K Y KK +++ E E R KK +E+++E+E +
Sbjct: 947 EREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREE---EELQQEEEQL 1003
Query: 117 L 117
L
Sbjct: 1004 L 1004
Score = 27.7 bits (60), Expect = 2.9
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAK--------YAKMEAEREAVRQGIRDKYGIKKK 75
+E++ ++EE +QE + EER+ + Y K E ++ Q +R++ +++
Sbjct: 1044 QERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRR 1103
Query: 76 EEREAEAQAAMEANSE 91
+ERE + + E E
Sbjct: 1104 QERERQCREEEELQQE 1119
Score = 27.3 bits (59), Expect = 3.8
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQ 83
EE++ + K+E ++ + +EE + +++ E E +R+ R + + ER+ E Q
Sbjct: 240 EEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQEL----RRERQEEEQ 295
Query: 84 AAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
E L R ++ +E E+ E
Sbjct: 296 QQQRLRREQQLRRKQEEERREQQEERREQQE 326
Score = 26.9 bits (58), Expect = 4.9
Identities = 12/56 (21%), Positives = 30/56 (53%)
Query: 32 KKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAME 87
++EE R++ LR+ +EE + + ++ Q +R + ++++++ E Q E
Sbjct: 355 QEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRRE 410
Score = 26.9 bits (58), Expect = 4.9
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 23 DEEKDPDAAKKEEERQE--ALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
+E + ++++ER+E R+ EEER + K E E E Q + ++ + +E ++
Sbjct: 640 EERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQARERIKS 699
Query: 81 -------EAQAAMEANSEGSLTRPKK 99
+ ++ +A +RP+K
Sbjct: 700 RIPKWQWQLESEADARQSKVYSRPRK 725
Score = 26.9 bits (58), Expect = 4.9
Identities = 20/100 (20%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 18 KMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEE 77
++L + EK ++ + R+E Q EEE+ + + + R+ + + R++ ++++EE
Sbjct: 1092 QLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEE 1151
Query: 78 REAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESIL 117
+ + E L R + +E+++E+E +L
Sbjct: 1152 QLLREEPEKRRRQE--LERQYRE-----EEELQQEEEQLL 1184
Score = 26.6 bits (57), Expect = 6.4
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 33 KEEERQEALRQAEEERKAKYAKMEAER--EAVRQGIRDKYGIKKKEEREAEAQ 83
+EEER +Q EE+R+ + +AE E RQ + + ++++ ER+ A+
Sbjct: 749 QEEERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAE 801
Score = 26.6 bits (57), Expect = 6.4
Identities = 19/95 (20%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 25 EKDPDAAKKEEER--QEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
++D + + +E+R Q+ Q EEERK + + A + A+++ +R + + ++EE E +
Sbjct: 857 QEDQERRRSQEQRRDQKWRWQLEEERKRRRHTLYA-KPALQEQLRKEQQLLQEEEEELQR 915
Query: 83 QAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESIL 117
+ + + + ++ +++++E+E +L
Sbjct: 916 EEREKRRRQEQERQYREE------EQLQQEEEQLL 944
Score = 26.6 bits (57), Expect = 6.4
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 32 KKEEERQEALRQAEEERKAKYAKMEAEREA-VRQGIRDKYGIKKKEEREAEAQAAMEANS 90
++ +ER+ R+ EE ++ + + ERE RQ + +Y +K+EE + E + +
Sbjct: 1041 RRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQY--RKEEELQQEEEQLLREEP 1098
Query: 91 EGSLTRPKKAIPPGCGDEVEEEDESIL 117
E R ++ +E+++E+E +L
Sbjct: 1099 E-KRRRQERERQCREEEELQQEEEQLL 1124
Score = 26.2 bits (56), Expect = 8.4
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEERE 79
E+++ +E +++E EEE K + + ERE Q + ++ ++++E +
Sbjct: 792 EQRERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQ 847
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 38.9 bits (89), Expect = 0.001
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
D E+D D E +E R E+ER+ + + E ERE R+ ++ ERE E
Sbjct: 724 DRERDRDRDHDRERERERERDREKEREREREERERERERERE---------RERERERER 774
Query: 83 QAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
+ A E + E R + G D E+ +E
Sbjct: 775 ERARERDKERERQRDWEDKDKGRDDRREKREE 806
Score = 35.8 bits (81), Expect = 0.011
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKM-------EAEREAVRQGIRDKYGIKKK 75
+ E+D + K+ E +E R+ E ER+ + + + ERE R+ R+K +++
Sbjct: 694 ERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERER 753
Query: 76 EEREAEAQAAMEANSEGSLTRPK 98
EERE E + E E R +
Sbjct: 754 EERERERERERERERERERERER 776
Score = 33.1 bits (74), Expect = 0.069
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKE---ERE 79
D+ +D A +++ ER+ + E + + + E ERE R+ R++ ++KE ER+
Sbjct: 669 DDRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERD 728
Query: 80 AEAQAAMEANSEGSLTRPKK 99
+ E E R K+
Sbjct: 729 RDRDHDRERERERERDREKE 748
Score = 32.3 bits (72), Expect = 0.12
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAK-MEAEREAVRQGIRDKYGIKKKEEREAE 81
+ E + + A++ E +E R E +R + + E ERE R+ R++ +++ ERE E
Sbjct: 704 ERELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERERE 763
Query: 82 AQAAMEANSEGSLTRPK 98
+ E E R +
Sbjct: 764 RERERERERERERARER 780
Score = 30.4 bits (67), Expect = 0.44
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 21 GGDEEKDPDAAKKE-------EERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
G ++E + D ++E + R E R+ + ER+ + ERE R+ RD+ +
Sbjct: 649 GRNDELERDERREERRVDRVDDRRDERARERDRERER-----DRERERERERERDR---E 700
Query: 74 KKEEREAEAQAAMEANSEGSLTRPKK 99
+++ERE E + A E E R ++
Sbjct: 701 REKERELERERAREREREREKERDRE 726
Score = 29.6 bits (65), Expect = 0.76
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 32 KKEEERQEALRQAEEERKAKYAKMEAER------EAVRQGIRDKYGIKKKEEREAEAQAA 85
+K E ++ + R E+E K K + ++ +R E+ R +D G + E+RE +A
Sbjct: 894 RKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQSEDRETSDRAH 953
Query: 86 MEANSEGSLTRPKKAIPPGCGDEVEEEDESILDT 119
E + + KK I D+V E +I T
Sbjct: 954 DENKKKAKI--QKKPIKKKKEDDVGIERGNIETT 985
>gi|4759276 RNA, U3 small nucleolar interacting protein 2 [Homo
sapiens]
Length = 475
Score = 38.5 bits (88), Expect = 0.002
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 11 GATKDMGKM---LGGDEEKDPDAAKK-EEERQEALRQAEEERKAKYAKMEAEREAVRQGI 66
G +K GKM + D E + A +K EEE +E L + +E+K + AK+ E+
Sbjct: 37 GKSKGGGKMNEEISSDSESESLAPRKPEEEEEEELEETAQEKKLRLAKLYLEQ------- 89
Query: 67 RDKYGIKKKEEREAEAQAAMEANSEGSL 94
++++EE +AEA+A E G L
Sbjct: 90 -----LRQQEEEKAEARAFEEDQVAGRL 112
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 38.5 bits (88), Expect = 0.002
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 23 DEEKDPDAAKKEEERQ---EALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKE-ER 78
D ++D D +KE ERQ + R+ E +R+ + K E +RE R+ R++ +++E ER
Sbjct: 267 DRDRDRDRRQKERERQTDRKRQRRTERDRETE-RKRERQRERERERERNRKRERERERER 325
Query: 79 EAEAQAAMEANSEGSLTRPKK 99
E E Q E + E R +K
Sbjct: 326 ERERQRETERDREKERERKRK 346
Score = 37.7 bits (86), Expect = 0.003
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKA------------KYAKMEAEREAVRQGIRDKY 70
+ +K+ + K +ER+E RQ E+E K + + E E E RQ R++
Sbjct: 174 NRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRER- 232
Query: 71 GIKKKEEREAEAQAAMEANSEGSLTRPKK 99
++K ERE E QA E SE R K+
Sbjct: 233 DRQRKTEREREKQAERERASERETERDKE 261
Score = 34.3 bits (77), Expect = 0.031
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERK-----AKYAKMEAEREAVRQGIRDKYGIKKKEE 77
+ +++ + +++E ++ RQ E +R+ + + +AERE R+ RD+ +++EE
Sbjct: 328 ERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREE 387
Query: 78 REAE 81
RE +
Sbjct: 388 RERD 391
Score = 32.3 bits (72), Expect = 0.12
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 25 EKDPDAAKKEEERQEALRQAEEERKAKYAK-MEAEREAVRQGIRDKYGI---KKKEEREA 80
E+D + +K E ++E R+ E RK + + E ERE R+ RD+ K+K + E
Sbjct: 292 ERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEM 351
Query: 81 EAQAAMEANSEG 92
+ + + EG
Sbjct: 352 DRERNRQTGREG 363
Score = 31.6 bits (70), Expect = 0.20
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
D E+D + E ++A R+ ER+ + K E ERE R RD+ +++ + + +
Sbjct: 229 DRERDRQRKTEREREKQAERERASERETERDK-ERERERDRDRDRDRRQKERERQTDRKR 287
Query: 83 QAAMEANSEGSLTRPKK 99
Q E + E R ++
Sbjct: 288 QRRTERDRETERKRERQ 304
Score = 31.2 bits (69), Expect = 0.26
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKE-----E 77
D E++ ++ + E R+ E ER + A+ ERE R R K ++ E +
Sbjct: 352 DRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQ 411
Query: 78 REAEAQAAMEANSEGSLTRPK 98
RE E Q E + E R +
Sbjct: 412 RETEKQREREKDRESERGRER 432
Score = 30.4 bits (67), Expect = 0.44
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 6 KQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQG 65
++ LG A KD G D E++ K+ E R+E RQ E E K E RE R
Sbjct: 39 RRGLGQAHKDAD---GDDRERNRQ--KERERRREK-RQTERETD---RKRERRREKDRHR 89
Query: 66 IRDKYGIKKKE-EREAEAQAAMEANSEGSLTRPKK 99
RD++ ++++ E+E E Q E + + R ++
Sbjct: 90 KRDRHRERQRDREKERERQTDRERDRQREKERNRQ 124
Score = 30.4 bits (67), Expect = 0.44
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
KD + E+ D +KE ERQ + + K + + E ERE R+G R + +
Sbjct: 85 KDRHRKRDRHRERQRDR-EKERERQTDRERDRQREKERNRQKERERETEREGERGR-DRQ 142
Query: 74 KKEEREAEAQAAMEANSEGSLTRPKK 99
+RE E Q E E R ++
Sbjct: 143 TDGQRERERQRDAEKERERQTDRERQ 168
Score = 30.4 bits (67), Expect = 0.44
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 15/88 (17%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKE------ 76
+ E+ DA K+ E + + RQ + ER + E ERE RQ R++ ++KE
Sbjct: 148 ERERQRDAEKERERQTDRERQRQTERNRQ---KEREREKNRQERRERERQREKENKTEDR 204
Query: 77 ------EREAEAQAAMEANSEGSLTRPK 98
ERE E + E + R +
Sbjct: 205 HSERGRERERERETETETERKRQTDRER 232
Score = 29.3 bits (64), Expect = 0.99
Identities = 17/86 (19%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
++ K + + + + +E +E R + +R+ K + + +R+ R+ RD+ +
Sbjct: 240 REREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETER 299
Query: 74 KKEEREAEAQAAMEANSEGSLTRPKK 99
K+ ER+ E + E N + R ++
Sbjct: 300 KR-ERQRERERERERNRKRERERERE 324
Score = 29.3 bits (64), Expect = 0.99
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 25 EKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQA 84
+ + D + + +E RQAE ER E ERE RQ R++ +++ +R+ + Q
Sbjct: 348 QTEMDRERNRQTGREGRRQAERER-------ERERERDRQSARERE--ERERDRDRDRQK 398
Query: 85 AMEANSE 91
E +E
Sbjct: 399 ERERQTE 405
Score = 28.9 bits (63), Expect = 1.3
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 21 GGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
G D + D ++E ERQ + E + + + + ER ++ R+K ++E RE
Sbjct: 138 GRDRQTD---GQRERERQRDAEKERERQTDRERQRQTERNRQKEREREK---NRQERRER 191
Query: 81 EAQAAMEANSE 91
E Q E +E
Sbjct: 192 ERQREKENKTE 202
Score = 27.7 bits (60), Expect = 2.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 23 DEEKDPDAAK-KEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKK-EEREA 80
+ E+D D + KE ERQ + + K + E +RE+ R R + K+K ER+
Sbjct: 387 ERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDR 446
Query: 81 EAQAAMEANSE 91
E Q +A +
Sbjct: 447 ERQTDRQAGRQ 457
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 38.1 bits (87), Expect = 0.002
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
K+ K + K+ + +KE E+Q R+ +E RK K K + ER+ ++G R++ K
Sbjct: 61 KEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERK--QRGRRERKKKK 118
Query: 74 KKEEREAEAQAAME 87
+++ERE E + E
Sbjct: 119 ERKERERENKQRRE 132
Score = 36.2 bits (82), Expect = 0.008
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
K+ K EK+ KKE++++E ++ ERK K + E ERE ++ R + +
Sbjct: 80 KEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRR 139
Query: 74 KKEEREAEAQAAMEANSEGSLTRPKK 99
KK+ R+ + E + KK
Sbjct: 140 KKKRRKERKREKERGKRERKRKKRKK 165
Score = 35.0 bits (79), Expect = 0.018
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 25 EKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQA 84
+++ + K+ ER++ R+ E+ERK + K E ++ R+ R K +K++ERE + +
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRE--RGKERERKRKEREKQRKE 88
Query: 85 AMEANSEGSLTRPKK 99
E KK
Sbjct: 89 RREKERRKRKKEKKK 103
Score = 32.7 bits (73), Expect = 0.089
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 22 GDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
G E+ +KE ER+ +Q E ++ K K + +E R+ R K K+K+ ++ E
Sbjct: 110 GRRERKKKKERKEREREN--KQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEE 167
Query: 82 AQAAMEAN 89
+ E N
Sbjct: 168 REKKRERN 175
Score = 31.6 bits (70), Expect = 0.20
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 22 GDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
G E+ KKEE ++ R +E +K + K ER+ R+ R +KK+ER+ +
Sbjct: 154 GKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKER-----RKKKERKKD 208
Query: 82 AQAAMEANSE 91
+ + +S+
Sbjct: 209 RKTDRQTDSQ 218
Score = 30.8 bits (68), Expect = 0.34
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEER--EA 80
+ E +K ++R++ R+ E +R+ + K E +R+ ++ R+K + ++ER E
Sbjct: 124 ERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKER 183
Query: 81 EAQAAMEANSEGSLTRPKK 99
E + E E R KK
Sbjct: 184 ERKERRERKKERKKERRKK 202
Score = 29.6 bits (65), Expect = 0.76
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 25 EKDPDAAKKEEERQEALRQAE---EERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
E+ +K++ R+E R+ E ERK K K E ERE R+ R++ KK+ ER+
Sbjct: 132 ERKRKKRRKKKRRKERKREKERGKRERKRKKRKKE-EREKKRE--RNRKERKKERERKER 188
Query: 82 AQAAMEANSEGSLTRPKK 99
+ E E + +K
Sbjct: 189 RERKKERKKERRKKKERK 206
Score = 28.9 bits (63), Expect = 1.3
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
E ++ + K+E E++ R+ E +K K + + ER R+ R + ++KE RE E
Sbjct: 39 ERREREKRKREREKE---RKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKE 93
Score = 27.7 bits (60), Expect = 2.9
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGI-KKKEEREAE 81
++E+ + KKE+++++ R+ +ER+ K + E +R+ R+ R K KKK ER+
Sbjct: 51 EKERKRERGKKEKKKRKK-RERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQR 109
Query: 82 AQAAMEANSE 91
+ + E
Sbjct: 110 GRRERKKKKE 119
Score = 26.9 bits (58), Expect = 4.9
Identities = 14/76 (18%), Positives = 35/76 (46%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQ 83
+E++ + ++ E +++ R+ + ++ K K +RE R+ + + KK+E E +
Sbjct: 121 KERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERK 180
Query: 84 AAMEANSEGSLTRPKK 99
E + +K
Sbjct: 181 KERERKERRERKKERK 196
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 38.1 bits (87), Expect = 0.002
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 6 KQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQG 65
+Q LG +D + GDE P + ++ E ++ K+K A + ER V+
Sbjct: 146 EQGLGKREEDEPEERSGDET--PGSEVPGDKAAEEQGDDQDSEKSKPAGSDGERRGVK-- 201
Query: 66 IRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILD 118
++++E++ +A E E +R K +PP + EEED+++++
Sbjct: 202 -------RQRDEKDEHGRAYYEFREEAYHSRSKSPLPPEEEAKDEEEDQTLVN 247
Score = 28.1 bits (61), Expect = 2.2
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 21 GGDEEKDPDAAKKEEERQEALRQAEEE 47
GGDEE+D + +EEE +EAL + E+E
Sbjct: 72 GGDEEEDEE---EEEEDEEALLEDEDE 95
>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
Length = 732
Score = 38.1 bits (87), Expect = 0.002
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 27 DPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAM 86
+ +A K+EEER+ RQ EE++K + + E ++ ++ +K+K+E+E + +A +
Sbjct: 448 EEEARKQEEERK---RQEEEKKKQEGEEKRKAGEEAKRKAEEELLLKEKQEQEKQEKAMI 504
Query: 87 EANSEGSLTRPKK 99
E E + T+ ++
Sbjct: 505 EKQKEAAETKARE 517
Score = 33.1 bits (74), Expect = 0.069
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDK--YGIKKKEEREAE 81
+++ + + E+E Q+ L + E +RKA+ ++ E EA +Q K KKK+E E +
Sbjct: 414 QKEQEEQERVEKEEQDRLEREELKRKAEEERLRLEEEARKQEEERKRQEEEKKKQEGEEK 473
Query: 82 AQAAMEA 88
+A EA
Sbjct: 474 RKAGEEA 480
Score = 32.3 bits (72), Expect = 0.12
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 18 KMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEE 77
K G ++ K + AK++ E + L++ +E+ K + A +E ++EA R+ + E
Sbjct: 467 KQEGEEKRKAGEEAKRKAEEELLLKEKQEQEKQEKAMIEKQKEAAETKAREVAEQMRLER 526
Query: 78 REAEAQAAME-----ANSEGSLTRPKKA-IPPGCGDEVEEEDESI 116
+ Q E + + R +K+ +PP +V++ED +
Sbjct: 527 EQIMLQIEQERLERKKRIDEIMKRTRKSDVPP----QVKKEDPKV 567
Score = 29.6 bits (65), Expect = 0.76
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 8 ALGGATKD---MGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAER----E 60
A GG ++ +GK G + A E+R++A Q E+E + + K E +R E
Sbjct: 376 AAGGKAENSAALGKPTAGTTDAGEAAKILAEKRRQARLQKEQEEQERVEKEEQDRLEREE 435
Query: 61 AVRQGIRDKYGIK---KKEEREAEAQAAMEANSEGSLTR 96
R+ ++ ++ +K+E E + Q + EG R
Sbjct: 436 LKRKAEEERLRLEEEARKQEEERKRQEEEKKKQEGEEKR 474
Score = 29.3 bits (64), Expect = 0.99
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 20/126 (15%)
Query: 24 EEKDPDAAKKE----EERQEALRQAEEERKAKYAKMEAEREAV---RQGIRDKYGIKKKE 76
EE++ A +E E+++ A Q E++ + ++ K+E +R+ R + +K K +E
Sbjct: 63 EEREKCLAAREQQILEKQKRARLQYEKQMEERWRKLEEQRQREDQKRAAVEEKRKQKLRE 122
Query: 77 ERE-AEAQAAMEANSEGSLTRPKK-------AIPPGCGDEVEEEDESILDTVIKYLPGPL 128
E E EA L KK AI PG D ++ L T LP P
Sbjct: 123 EEERLEAMMRRSLERTQQLELKKKYSWGAPLAIGPGGHDACDK-----LSTSTMSLPKPT 177
Query: 129 QDMLKK 134
+ + K
Sbjct: 178 EPPMNK 183
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 37.7 bits (86), Expect = 0.003
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Query: 23 DEEKDPDAAKKEEE--RQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
+EE++ + ++EEE +E R+ EEE + K + E E + ++ + K +++KEE
Sbjct: 2248 EEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFE 2307
Query: 81 EAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILD 118
E + M SL+ DE EEE+ L+
Sbjct: 2308 EKEEIMSEEETESLS-----------DEEEEEESCSLE 2334
Score = 37.0 bits (84), Expect = 0.005
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 13 TKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGI---RDK 69
+++M +L E+++ ++++EEER+E + EEE + + + + E E + + ++
Sbjct: 2227 SEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEE 2286
Query: 70 YGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTV 120
KKKE+++ E Q E E ++ +E EEE S+ + V
Sbjct: 2287 KKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEV 2337
Score = 31.2 bits (69), Expect = 0.26
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 22 GDEEKDPDAAKKEE--------ERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
GD+ K+ +++ +E E E+L E++++ ++ E ERE + R++ ++
Sbjct: 2206 GDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEE--REEEEVR 2263
Query: 74 KKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
++EE E + E E KK +EV+E++E
Sbjct: 2264 EEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEE 2304
Score = 26.2 bits (56), Expect = 8.4
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERK-AKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
+EE + +KE++ E R +EE K A+ + A E R K ++++ + E
Sbjct: 1547 EEEVSREGEEKEQQVTEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEE 1606
Query: 82 AQAAME 87
Q A E
Sbjct: 1607 RQLAQE 1612
Score = 26.2 bits (56), Expect = 8.4
Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 24 EEKDPDAAKKEE---ERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
E+K + +KEE E++E + + E E + + E + R+K +KK+++ +
Sbjct: 2293 EKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQFKL 2352
Query: 81 EAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTVIKYLPGPLQDMLKK 134
+ Q + + +P G G + +L + +K L +M +K
Sbjct: 2353 QEQRRKSLRGRERVLSILRGVPHGKGRAIR---LGVLKSPLKKLMSTALEMKEK 2403
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 37.7 bits (86), Expect = 0.003
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEER----- 78
EE++ K++E+R+E ++ E+++K K + E+E + + K KK+EE
Sbjct: 20 EEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEE 79
Query: 79 -EAEAQAAMEANSEGSLTRPKK 99
E E + E EG + KK
Sbjct: 80 EEEEEEKEEEEKEEGRRRKKKK 101
Score = 33.9 bits (76), Expect = 0.040
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 13 TKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGI 72
TK+ K +EE+ K++++++E R+ EEE + + K E E+E R+ + K
Sbjct: 46 TKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEE-EKEEEEKEEGRRRKKKKKRR 104
Query: 73 KKKEERE 79
+K+EE E
Sbjct: 105 RKEEEEE 111
Score = 33.1 bits (74), Expect = 0.069
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 32 KKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANSE 91
KKE E E + EEE + + + E +E + K KKK+ +E E + E +
Sbjct: 7 KKETEETEETEETEEEEEKEGKRKEKRKE------KRKEKEKKKKTKETEKRKEKEEEEK 60
Query: 92 GSLTRPKKAIPPGCGDEVEEEDE 114
+ KK +E EEE+E
Sbjct: 61 KRKRKRKKKKEEEEREEEEEEEE 83
Score = 29.3 bits (64), Expect = 0.99
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQ 83
++K ++ EE +E + E+E K K + E +E ++ + K K+KE+ E E +
Sbjct: 3 KKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKK-KTKETEKRKEKEEEEKK 61
Query: 84 AAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
+ R KK +E EEE+E
Sbjct: 62 RKRK--------RKKKKEEEEREEEEEEEEE 84
Score = 29.3 bits (64), Expect = 0.99
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 14/90 (15%)
Query: 24 EEKDPDAAKKEEERQEALRQAE--EERKAKYAKM------------EAEREAVRQGIRDK 69
EE + +EEE +E R+ + E+RK K K E E++ R+ + K
Sbjct: 11 EETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKK 70
Query: 70 YGIKKKEEREAEAQAAMEANSEGSLTRPKK 99
+++EE E E + E E R KK
Sbjct: 71 EEEEREEEEEEEEEEKEEEEKEEGRRRKKK 100
Score = 29.3 bits (64), Expect = 0.99
Identities = 11/47 (23%), Positives = 31/47 (65%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDK 69
+EE++ + K+EEE++E R+ +++++ + + E +++ R+ + K
Sbjct: 77 EEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 28.9 bits (63), Expect = 1.3
Identities = 12/42 (28%), Positives = 28/42 (66%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQ 64
+EE++ + +KEEE +E R+ ++++K + + E E++ R+
Sbjct: 76 EEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRR 117
Score = 28.5 bits (62), Expect = 1.7
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKK 74
+EE++ + ++EEE++E ++ RK K + E E ++ R + KK
Sbjct: 72 EEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 37.7 bits (86), Expect = 0.003
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKY-AKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
EE++ A++E R +A QAEE R+ + A++E R + R +K++EE EAE
Sbjct: 309 EERERLEAEEERRRLQAQAQAEERRRLEEDARLEERRRQEEEEGRCAEELKRQEEEEAEG 368
Query: 83 QAAMEANSEGSLTRPKKAI-PPGCGDEVEEEDE 114
+E E + P +A+ G G EE++
Sbjct: 369 WEELE-QQEAEVQGPPEALEETGEGRRGAEEED 400
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 37.4 bits (85), Expect = 0.004
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 17/103 (16%)
Query: 21 GGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
GG+E P K+E+E E EEE E E E G+ D G++ K+ A
Sbjct: 570 GGEEGDGPPGGKEEDEDDEEEEDEEEE--------EDEEEGEEGGLLD-CGLRLKKVSFA 620
Query: 81 EAQAAMEAN--------SEGSLTRPKKAIPPGCGDEVEEEDES 115
E A EGS T +K + PG EE+DE+
Sbjct: 621 ERGAGRRRPGPSPEALLEEGSPTMVEKGLEPGVFTLAEEDDEA 663
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 37.4 bits (85), Expect = 0.004
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 11 GATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKY 70
GA D + G EK+ + K+E E++E +AE E + AK E
Sbjct: 542 GAKSDQAEE--GGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEE-------------- 585
Query: 71 GIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDES 115
KK EE+ E E ++ + +P+KA P VEE+ +S
Sbjct: 586 --KKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKS 628
Score = 35.8 bits (81), Expect = 0.011
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 5 MKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQ 64
M++AL T+++ + +E+ +AA+++EE EA EEE AK + ++A V++
Sbjct: 469 MEEALTAITEELAVSM---KEEKKEAAEEKEEEPEA---EEEEVAAKKSPVKATAPEVKE 522
Query: 65 GIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDES 115
+K + +EE E E + A +E + + + G++ E E E+
Sbjct: 523 EEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEA 573
Score = 32.7 bits (73), Expect = 0.089
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 24/107 (22%)
Query: 23 DEEKDPDAAKK-------------EEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDK 69
+ E++ AAKK E E++E Q EEE + + AK + E G +K
Sbjct: 500 EAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEE----GGSEK 555
Query: 70 YGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESI 116
G +KEE E E + EA +EG K+ +VEE+ E +
Sbjct: 556 EGSSEKEEGEQE-EGETEAEAEGEEAEAKEE------KKVEEKSEEV 595
Score = 27.7 bits (60), Expect = 2.9
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
+EEK+ A KEE+ ++ + ++ + K A+ + EAV + + +K E+E +
Sbjct: 704 EEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETK- 762
Query: 83 QAAMEANSEGSLTRPKKAIPPGCGDEVEEEDES 115
EG + +K G+ EE+ S
Sbjct: 763 -------EEGKPLQQEKEKEKAGGEGGSEEEGS 788
Score = 27.7 bits (60), Expect = 2.9
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 25/113 (22%)
Query: 5 MKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQ--------------------EALRQA 44
+K L TK+ GK L ++EK+ + E + E +
Sbjct: 753 VKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEV 812
Query: 45 EEERKAKYAKMEAEREAVRQGI-----RDKYGIKKKEEREAEAQAAMEANSEG 92
E+E K K + E E+ V G+ +K G K EE+ + + SEG
Sbjct: 813 EQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKTVEKITSEG 865
Score = 26.2 bits (56), Expect = 8.4
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 34 EEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANS 90
E + + QAEE K +YAK+ E ++K I+ +E AE + +++ S
Sbjct: 278 ESHSDQNMHQAEEWFKCRYAKLTEAAE------QNKEAIRSAKEEIAEYRRQLQSKS 328
Score = 26.2 bits (56), Expect = 8.4
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 24 EEKDPDAAKK---EEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
EEK K EE+ + + ++ E KAK ++ E + G +K+EE +
Sbjct: 649 EEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKE 708
Query: 81 EAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTV 120
+A E E +PK +P E ++E++ + V
Sbjct: 709 VKEAPKEEKVEKKEEKPKD-VPEKKKAESPVKEEAVAEVV 747
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 37.4 bits (85), Expect = 0.004
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 11 GATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKY 70
GA D + G EK+ + K+E E++E +AE E + AK E
Sbjct: 166 GAKSDQAEE--GGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEE-------------- 209
Query: 71 GIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDES 115
KK EE+ E E ++ + +P+KA P VEE+ +S
Sbjct: 210 --KKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKS 252
Score = 35.8 bits (81), Expect = 0.011
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 5 MKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQ 64
M++AL T+++ + +E+ +AA+++EE EA EEE AK + ++A V++
Sbjct: 93 MEEALTAITEELAVSM---KEEKKEAAEEKEEEPEA---EEEEVAAKKSPVKATAPEVKE 146
Query: 65 GIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDES 115
+K + +EE E E + A +E + + + G++ E E E+
Sbjct: 147 EEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEA 197
Score = 32.7 bits (73), Expect = 0.089
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 24/107 (22%)
Query: 23 DEEKDPDAAKK-------------EEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDK 69
+ E++ AAKK E E++E Q EEE + + AK + E G +K
Sbjct: 124 EAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEE----GGSEK 179
Query: 70 YGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESI 116
G +KEE E E + EA +EG K+ +VEE+ E +
Sbjct: 180 EGSSEKEEGEQE-EGETEAEAEGEEAEAKEE------KKVEEKSEEV 219
Score = 27.7 bits (60), Expect = 2.9
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
+EEK+ A KEE+ ++ + ++ + K A+ + EAV + + +K E+E +
Sbjct: 328 EEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETK- 386
Query: 83 QAAMEANSEGSLTRPKKAIPPGCGDEVEEEDES 115
EG + +K G+ EE+ S
Sbjct: 387 -------EEGKPLQQEKEKEKAGGEGGSEEEGS 412
Score = 27.7 bits (60), Expect = 2.9
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 25/113 (22%)
Query: 5 MKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQ--------------------EALRQA 44
+K L TK+ GK L ++EK+ + E + E +
Sbjct: 377 VKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEV 436
Query: 45 EEERKAKYAKMEAEREAVRQGI-----RDKYGIKKKEEREAEAQAAMEANSEG 92
E+E K K + E E+ V G+ +K G K EE+ + + SEG
Sbjct: 437 EQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKTVEKITSEG 489
Score = 26.2 bits (56), Expect = 8.4
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 24 EEKDPDAAKK---EEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
EEK K EE+ + + ++ E KAK ++ E + G +K+EE +
Sbjct: 273 EEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKE 332
Query: 81 EAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTV 120
+A E E +PK +P E ++E++ + V
Sbjct: 333 VKEAPKEEKVEKKEEKPKD-VPEKKKAESPVKEEAVAEVV 371
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 37.4 bits (85), Expect = 0.004
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 21 GGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREA 80
GG+EE E E +E R+ EEE++ + K E E E V + G +KKEER
Sbjct: 730 GGEEEHG------EGEEEEGDREEEEEKEGE-GKEEGEGEEVEGEREKEEGERKKEERAG 782
Query: 81 EAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
+ + E EG ++ G G+E EE E
Sbjct: 783 KEEKGEE---EGDQGEGEEEETEGRGEEKEEGGE 813
Score = 32.7 bits (73), Expect = 0.089
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 22 GDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
G+ E++ K EEE +E + EEE E E E ++ G + EE E E
Sbjct: 910 GEGEEEEGEGKGEEEGEEGEGEGEEEEG------EGEGEDGEGEGEEEEGEWEGEEEEGE 963
Query: 82 AQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
+ E EG + G G+ EEE E
Sbjct: 964 GEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGE 996
Score = 31.6 bits (70), Expect = 0.20
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 11 GATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKY 70
G + GK G EE++ + +EEE + + E E + K E E E +
Sbjct: 816 GGEVEEGK--GEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEE 873
Query: 71 GIKKKEEREAEAQAAMEANSEGSLTRPK-KAIPPGCGDEVEEEDE 114
G + EE E E + E EG + + G G+ EEE E
Sbjct: 874 GEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGE 918
Score = 31.6 bits (70), Expect = 0.20
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 22 GDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
G+EE+ ++EE +E + E E + + E E V + + G + EE E E
Sbjct: 981 GEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGE 1040
Query: 82 AQA-AMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
+ E EG R + E EEE+E
Sbjct: 1041 EEGEEREKEGEGEENRRNR--------EEEEEEE 1066
Score = 30.8 bits (68), Expect = 0.34
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 11 GATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKY 70
G ++ G+ G+EE + + EEE E + E E + + + E E E +G ++
Sbjct: 856 GKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEE 915
Query: 71 GIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
+ K E E E E EG + G G+ EEE E
Sbjct: 916 EGEGKGEEEGE-----EGEGEGEEEEGEGEGEDGEGEGEEEEGE 954
Score = 30.4 bits (67), Expect = 0.44
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 11 GATKDMGKMLGGDEEKDPDAAKKE---------EERQEALRQAEEERKAKYAKMEAEREA 61
G + G+ + G+ EK+ KKE EE + EEE + + + E E
Sbjct: 755 GKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEV 814
Query: 62 VRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
+ + G +++EE E E + E E ++ G G+E EE E
Sbjct: 815 EGGEVEEGKGEREEEEEEGEGEEE-EGEGEEEEGEGEEEEGEGKGEEEGEEGE 866
Score = 30.0 bits (66), Expect = 0.58
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 12 ATKDMGKMLGGDEE--KDPDAAKKEEERQEALRQAEEER---KAKYAKMEAEREAVRQGI 66
A K+ K G+E+ K+ + ++E QE EEE + + E E E +G
Sbjct: 697 AEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGK 756
Query: 67 RDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEE 112
+ G + + ERE E + G + ++ G G+E E E
Sbjct: 757 EEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETE 802
Score = 29.6 bits (65), Expect = 0.76
Identities = 16/71 (22%), Positives = 36/71 (50%)
Query: 11 GATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKY 70
G ++ G++ G E ++ + +EEE +E + E+E + + + E E +G +
Sbjct: 1013 GEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQET 1072
Query: 71 GIKKKEEREAE 81
G ++ E ++ E
Sbjct: 1073 GEEENERQDGE 1083
Score = 29.3 bits (64), Expect = 0.99
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 10 GGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDK 69
G ++ G+ G +EE + + ++ E +E + EEE + + + E E E ++
Sbjct: 979 GEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGE-VEGEVEGEEGEGEGEEE 1037
Query: 70 YGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILD 118
G ++ EERE E + E R ++ G E EE+ D
Sbjct: 1038 EGEEEGEEREKEGE-----GEENRRNREEEEEEEGKYQETGEEENERQD 1081
>gi|13027602 DDRGK domain containing 1 [Homo sapiens]
Length = 314
Score = 37.4 bits (85), Expect = 0.004
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 33 KEEERQEALRQAEEERKAKYAKMEAEREAV----RQGIRDKYGIKKKEEREA-EAQAAME 87
+E++ ++A R+AEE + + ++E++REA + +R + K++EER+A E QA E
Sbjct: 126 EEKQARKAQREAEEAEREERKRLESQREAEWKKEEERLRLEEEQKEEEERKAREEQAQRE 185
Query: 88 ANSEGSLTRPKKAIPPGCGDEV-EEEDESILDTVIKYL 124
L G G+ + EE+ +S L I Y+
Sbjct: 186 HEEYLKLKEAFVVEEEGVGETMTEEQSQSFLTEFINYI 223
Score = 28.1 bits (61), Expect = 2.2
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 32 KKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKE----EREAEAQAAME 87
KKEEER + +EE + K + +A+RE ++Y +K KE E E + E
Sbjct: 157 KKEEERLRLEEEQKEEEERKAREEQAQRE------HEEY-LKLKEAFVVEEEGVGETMTE 209
Query: 88 ANSEGSLT 95
S+ LT
Sbjct: 210 EQSQSFLT 217
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 37.4 bits (85), Expect = 0.004
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 24 EEKDPDAAK--KEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAE 81
+++D + AK K +E++E +++ K K ++ + E E V+ + G+ E +AE
Sbjct: 241 KKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAE 300
Query: 82 AQAAMEANSEGSLTRPKKAIPPGCGDEVEEE 112
A E ++EG + K G +E E+E
Sbjct: 301 TPTAAEDDNEGDKKKKDKKKKKGEKEEKEKE 331
Score = 33.5 bits (75), Expect = 0.052
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 14 KDMGKMLGGDEEKDPDAAK---------------KEEERQEALRQAEEERKAKYAKMEAE 58
KD K G EEK+ + K K +E +E ++ EEER + ++EA+
Sbjct: 316 KDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAK 375
Query: 59 REAVRQGIRDKYGIKKKEEREAEAQAAME 87
R+ + ++K KK++E+E + + E
Sbjct: 376 RKEEERLEQEKRERKKQKEKERKERLKKE 404
Score = 30.8 bits (68), Expect = 0.34
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 5 MKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQ 64
M++AL ++ + +EE+ + E +R+E R +E+R+ K K + +E +++
Sbjct: 344 MQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKK 403
Query: 65 GIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKK 99
K K + E A A+A ++ + P K
Sbjct: 404 --EGKLLTKSQREARARAEATLKLLQAQGVEVPSK 436
Score = 29.6 bits (65), Expect = 0.76
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 24/105 (22%)
Query: 23 DEEKDPDAAKKEEERQ---------EALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
++E+ P + EEE EA+ EE K + K+ E V++ ++ +
Sbjct: 482 EKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIE---VKENPEEEEEEE 538
Query: 74 KKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILD 118
++EE + E++ E E G E +EEDE + D
Sbjct: 539 EEEEEDEESEEEEEEEGESE------------GSEGDEEDEKVSD 571
Score = 28.9 bits (63), Expect = 1.3
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 25 EKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQA 84
E++ + ++EEE +E+ + EEE +++ ++ + E E V + KK +E + +
Sbjct: 532 EEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDS 591
Query: 85 AMEANSEGSLTRPKKA 100
E +S+ T+ ++A
Sbjct: 592 --EYDSDDDRTKEERA 605
Score = 27.3 bits (59), Expect = 3.8
Identities = 15/69 (21%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAK---YAKMEAEREAVRQGIRDKYGIKKKEERE 79
+++ + D KK++++++ ++ +E+ K K A ++A +EA+ + ++ K++EE
Sbjct: 306 EDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEER 365
Query: 80 AEAQAAMEA 88
+ +EA
Sbjct: 366 IKRLEELEA 374
Score = 26.2 bits (56), Expect = 8.4
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 21 GGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEA----EREAVRQGIRDKYGIKKKE 76
G ++KD K E+E +E ++ + A EA + E RQ ++ IK+ E
Sbjct: 311 GDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLE 370
Query: 77 EREAE 81
E EA+
Sbjct: 371 ELEAK 375
>gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo
sapiens]
Length = 1101
Score = 37.4 bits (85), Expect = 0.004
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 21 GGDE---EKDPDAAKKEEERQEA--------LRQAEEERKAKYAKMEAEREAVRQGIRDK 69
GGDE EK+ + ++E+E++E L Q +E + K E ++ +G+R+
Sbjct: 738 GGDEYTDEKEKEIEREEDEQREEAQVEAGRDLEQGAQEDQVAEEKWEVVQKQEAEGVRED 797
Query: 70 YGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDES 115
+ K +RE A + +G +R +A G EV +E ES
Sbjct: 798 ---EDKGQREKGYHEARKDQGDGEDSRSPEAATEGGAGEVSKERES 840
Score = 34.3 bits (77), Expect = 0.031
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 6 KQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEA---------LRQ-AEEERKAKYAKM 55
KQA G D+ + G E +A K E+R EA LR+ + EE +AK K
Sbjct: 661 KQAEPGGRLDIREEAEGSPETKVEAGKASEDRGEAGGSQETKVRLREGSREETEAKEEKS 720
Query: 56 EAEREA---VRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGC-GDEVEE 111
+ +++A +G+ + G + +E+E E + + E + + + G D+V E
Sbjct: 721 KGQKKADSMEAKGVEEPGGDEYTDEKEKEIEREEDEQREEAQVEAGRDLEQGAQEDQVAE 780
Query: 112 E 112
E
Sbjct: 781 E 781
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 37.0 bits (84), Expect = 0.005
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
++ +M+ EEK + +K E++E +R+ EE+ + + KM+ + E +R+ G +
Sbjct: 628 QEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMREQEEKMQGQE 687
Query: 74 KKEEREAEAQAAMEANSEGSLTRPKKAIPPGCG-DEVEEEDESILD 118
+K + E E G + G +E+ E++E I D
Sbjct: 688 EKMREQEEKMRGQEEKMWGQEEKMWGQEEKMWGQEEMREKEERIRD 733
Score = 32.0 bits (71), Expect = 0.15
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
D+E+ ++ ER++ +R+ EE + + KM+ + E +R+ +EE+ E
Sbjct: 551 DQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMRE----------QEEKMWEQ 600
Query: 83 QAAMEANSEGSLTRPKKAIPPGCGDEVEEEDE 114
+ M+ E + +K D+++E++E
Sbjct: 601 EEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEE 632
Score = 31.6 bits (70), Expect = 0.20
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYG-- 71
++ + + G EEK + +K + ++E +R+ EE+ + + KM + E + +G
Sbjct: 663 REQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQEEKMWGQEEKMWGQEEKMWGQE 722
Query: 72 -IKKKEEREAEAQAAME 87
+++KEER + + M+
Sbjct: 723 EMREKEERIRDQKEKMQ 739
Score = 29.3 bits (64), Expect = 0.99
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEA 82
++EK+ +KE Q+ LR+ EE+ + + KM + E +R+ + + ++EER E
Sbjct: 287 EQEKELREQEKELREQKKLREQEEQMQEQEEKMWEQEEKMRE---QEEKMWRQEERLWEQ 343
Query: 83 QAAMEANSE 91
+ M +
Sbjct: 344 EKQMREQEQ 352
Score = 28.9 bits (63), Expect = 1.3
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 18 KMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEE 77
K + E+K D ++ E+ E LR+ +EER + KM + E +++ R I+++E+
Sbjct: 345 KQMREQEQKMRDQEERMWEQDERLRE-KEERMREQEKMWEQEEKMQEEER----IREREK 399
Query: 78 REAEAQAAMEANSE 91
+ E + M E
Sbjct: 400 KMREEEETMREQEE 413
Score = 28.5 bits (62), Expect = 1.7
Identities = 17/78 (21%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
++ K + +EE + +K +E++E +R+ EE+ + KM+ + E + + +K +
Sbjct: 563 REREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQ-EEKMWEQ 621
Query: 74 KKEEREAEAQAAMEANSE 91
++E++ E + M E
Sbjct: 622 EEEDKMQEQEEMMWEQEE 639
Score = 28.5 bits (62), Expect = 1.7
Identities = 22/104 (21%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 18 KMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKY-----GI 72
KM +E+ K E+ ++ Q EE++ + +M E+E Q +K +
Sbjct: 596 KMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKM 655
Query: 73 KKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESI 116
+++EE+ E + M+ E + +K G +++ E++E +
Sbjct: 656 REQEEKMREQEEKMQGQEEKMREQEEKM--QGQEEKMREQEEKM 697
Score = 27.7 bits (60), Expect = 2.9
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 25 EKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREA----VRQGIRDKYGIKKKEEREA 80
E+D +KEE +E + ++E K + K E+E + +R++ ++++E++
Sbjct: 511 EQDERLREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKMR 570
Query: 81 EAQAAMEANSE 91
E + M E
Sbjct: 571 EEEEMMREQEE 581
Score = 27.3 bits (59), Expect = 3.8
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 24 EEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQ 83
E+K D ++ E+ E LR+ +EER + KM + E +R+ + + KK ++E + +
Sbjct: 499 EQKMWDQEERMWEQDERLRE-KEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMR 557
Query: 84 AAMEANSEGSLTRPKKAIPPGCGDEVEEEDESI 116
R ++ + ++++E++E +
Sbjct: 558 EEERMREREKKMREEEEMMREQEEKMQEQEEKM 590
Score = 26.9 bits (58), Expect = 4.9
Identities = 15/74 (20%), Positives = 37/74 (50%)
Query: 14 KDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIK 73
++ K + EEK ++ E++ +R+ EE+ + + ++ + + +R+ ++ K
Sbjct: 244 REQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQK 303
Query: 74 KKEEREAEAQAAME 87
K E+E + Q E
Sbjct: 304 KLREQEEQMQEQEE 317
>gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens]
Length = 871
Score = 37.0 bits (84), Expect = 0.005
Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 17 GKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKE 76
G LG E K D +K+E+ ++A + + K K ++ + ++E ++ + KK
Sbjct: 292 GAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKE--AKKSS 349
Query: 77 EREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESI 116
++ + ++ EGS++ + G +E +EE E++
Sbjct: 350 KKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEAL 389
Score = 30.4 bits (67), Expect = 0.44
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 25 EKDPDAAKKEEERQEALRQAEEERKAKYAKMEA--EREAVRQGIRDKYGIKKKEEREAEA 82
E D D +K+E+ ++ +++ ++R K++ ++ E + G ++E+ EAEA
Sbjct: 329 EGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEA 388
Query: 83 QAAMEANSEGSLTRPKKAIPPGC 105
E E +PK A C
Sbjct: 389 LKEKEKPKEEEWEKPKDAAGLEC 411
Score = 27.7 bits (60), Expect = 2.9
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 10 GGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAK 54
G + D G + + E + A++E+E EAL++ E+ ++ ++ K
Sbjct: 358 GDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEK 402
>gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens]
Length = 872
Score = 37.0 bits (84), Expect = 0.005
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 17 GKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYGIKKKE 76
G LG E K D +K+E+ ++A + + K K ++ + ++E ++ + KK
Sbjct: 292 GAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKE--AKKSS 349
Query: 77 EREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESIL 117
++ + ++ EGS++ + G +E +EE E L
Sbjct: 350 KKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEEAL 390
Score = 26.9 bits (58), Expect = 4.9
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 23 DEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREA 61
+ E + ++ + EEE++EA +E+ K K + E ++A
Sbjct: 369 ESESESESGQAEEEKEEAEEALKEKEKPKEEEWEKPKDA 407
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.127 0.335
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,537,101
Number of Sequences: 37866
Number of extensions: 261422
Number of successful extensions: 5816
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 397
Number of HSP's that attempted gapping in prelim test: 2209
Number of HSP's gapped (non-prelim): 2833
length of query: 134
length of database: 18,247,518
effective HSP length: 91
effective length of query: 43
effective length of database: 14,801,712
effective search space: 636473616
effective search space used: 636473616
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.