Guide to the Human Genome
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Name: SRRT Sequence: fasta or formatted (872aa) NCBI GI: 192807334
Description:

arsenate resistance protein 2 isoform d

Referenced in:

Iron, Copper, and Arsenic Metabolism

Other entries for this name:
alt prot [875aa] arsenate resistance protein 2 isoform c
alt prot [871aa] arsenate resistance protein 2 isoform e
alt prot [876aa] arsenate resistance protein 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         45           2
 C cysteine            0.9          8           1
 D aspartate           7.7         67           2
 E glutamate          11.6        101           5
 F phenylalanine       3.1         27           2
 G glycine             7.6         66           5
 H histidine           2.3         20           2
 I isoleucine          3.9         34           2
 K lysine              7.9         69           2
 L leucine             7.1         62           3
 M methionine          1.8         16           1
 N asparagine          3.8         33           2
 P proline             8.1         71           3
 Q glutamine           3.3         29           2
 R arginine            9.1         79           4
 S serine              5.6         49           2
 T threonine           2.9         25           1
 V valine              3.9         34           1
 W tryptophan          1.4         12           1
 Y tyrosine            2.9         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arsenate resistance protein 2 isoform d 
SRRT                  0.996   arsenate resistance protein 2 isoform e 
SRRT                  0.996   arsenate resistance protein 2 isoform a 
SRRT                  0.992   arsenate resistance protein 2 isoform c 
NSBP1                 0.030   nucleosomal binding protein 1 
RPGR                  0.025   retinitis pigmentosa GTPase regulator isoform C [Hom...
SETD1B                0.024   SET domain containing 1B 
SLC24A1               0.023   solute carrier family 24 (sodium/potassium/calcium ex...
C1orf173              0.022   hypothetical protein LOC127254 
LOC100294088          0.022   PREDICTED: hypothetical protein, partial 
SETD1A                0.022   SET domain containing 1A 
CCAR1                 0.021   cell-cycle and apoptosis regulatory protein 1 
AP3B1                 0.021   adaptor-related protein complex 3, beta 1 subunit [H...
WDR87                 0.021   NYD-SP11 protein 
ABCF1                 0.021   ATP-binding cassette, sub-family F, member 1 isoform...
CYLC1                 0.020   cylicin, basic protein of sperm head cytoskeleton 1...
LOC100133599          0.020   PREDICTED: hypothetical protein 
RBM25                 0.019   RNA binding motif protein 25 
NEFH                  0.019   neurofilament, heavy polypeptide 200kDa 
LOC100133599          0.018   PREDICTED: hypothetical protein 
FAM133B               0.018   hypothetical protein LOC257415 isoform 2 
FAM133B               0.018   hypothetical protein LOC257415 isoform 1 
FAM133A               0.018   hypothetical protein LOC286499 
CYLC2                 0.018   cylicin 2 
MAP1B                 0.018   microtubule-associated protein 1B 
RP1L1                 0.018   retinitis pigmentosa 1-like 1 
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
NCL                   0.018   nucleolin 
GTF2F1                0.018   general transcription factor IIF, polypeptide 1, 74...
LOC100133758          0.017   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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