CLSTN1 33303

Name: CLSTN1	Sequence: fasta or formatted (971aa)		NCBI GI: 57242755
Description: calsyntenin 1 isoform 2		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [981aa] calsyntenin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 57 3 C cysteine 2.3 22 1 D aspartate 6.3 61 2 E glutamate 10.3 100 11 F phenylalanine 3.6 35 2 G glycine 6.5 63 3 H histidine 3.8 37 2 I isoleucine 4.6 45 2 K lysine 4.9 48 2 L leucine 7.9 77 3 M methionine 1.6 16 1 N asparagine 3.6 35 2 P proline 5.3 51 2 Q glutamine 3.8 37 3 R arginine 4.1 40 2 S serine 7.0 68 3 T threonine 6.3 61 1 V valine 8.1 79 3 W tryptophan 1.2 12 1 Y tyrosine 2.8 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calsyntenin 1 isoform 2 CLSTN1 0.996 calsyntenin 1 isoform 1 CLSTN2 0.551 calsyntenin 2 CLSTN3 0.509 calsyntenin 3 FAT3 0.021 FAT tumor suppressor homolog 3 PCDH11X 0.020 protocadherin 11 X-linked isoform a precursor PCDH11X 0.020 protocadherin 11 X-linked isoform d PCDH11X 0.020 protocadherin 11 X-linked isoform c PCDH11X 0.020 protocadherin 11 X-linked isoform b precursor CELSR3 0.019 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... FAT1 0.019 FAT tumor suppressor 1 precursor CELSR2 0.017 cadherin EGF LAG seven-pass G-type receptor 2 FAT4 0.016 FAT tumor suppressor homolog 4 CELSR1 0.016 cadherin EGF LAG seven-pass G-type receptor 1 FAT2 0.015 FAT tumor suppressor 2 precursor PCDH19 0.015 protocadherin 19 isoform a PCDH19 0.015 protocadherin 19 isoform b MYST4 0.015 MYST histone acetyltransferase (monocytic leukemia)... PCDHB8 0.015 protocadherin beta 8 precursor PCDHB11 0.015 protocadherin beta 11 precursor MYT1 0.014 myelin transcription factor 1 CDH12 0.014 cadherin 12, type 2 preproprotein PCDH15 0.014 protocadherin 15 isoform CD1-4 precursor PCDH15 0.014 protocadherin 15 isoform CD1-10 precursor PCDH15 0.014 protocadherin 15 isoform CD3-2 precursor PCDH15 0.014 protocadherin 15 isoform CD3-1 precursor PCDH15 0.014 protocadherin 15 isoform CD2-2 precursor PCDH15 0.014 protocadherin 15 isoform CD2-1 precursor PCDH15 0.014 protocadherin 15 isoform CD1-9 precursor PCDH15 0.014 protocadherin 15 isoform CD1-8 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.