PCDHB11 37326

Name: PCDHB11	Sequence: fasta or formatted (797aa)		NCBI GI: 9256604
Description: protocadherin beta 11 precursor		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 52 2 C cysteine 1.0 8 1 D aspartate 5.8 46 1 E glutamate 6.6 53 2 F phenylalanine 4.3 34 1 G glycine 6.1 49 3 H histidine 1.6 13 1 I isoleucine 5.3 42 3 K lysine 3.1 25 2 L leucine 11.8 94 3 M methionine 0.9 7 1 N asparagine 5.3 42 2 P proline 5.5 44 2 Q glutamine 4.0 32 2 R arginine 4.5 36 2 S serine 9.8 78 2 T threonine 6.0 48 2 V valine 8.9 71 4 W tryptophan 0.5 4 1 Y tyrosine 2.4 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin beta 11 precursor PCDHB12 0.886 protocadherin beta 12 precursor PCDHB14 0.774 protocadherin beta 14 precursor PCDHB3 0.752 protocadherin beta 3 precursor PCDHB2 0.747 protocadherin beta 2 precursor PCDHB16 0.741 protocadherin beta 16 precursor PCDHB5 0.739 protocadherin beta 5 precursor PCDHB8 0.738 protocadherin beta 8 precursor PCDHB4 0.737 protocadherin beta 4 precursor PCDHB15 0.733 protocadherin beta 15 precursor PCDHB13 0.728 protocadherin beta 13 precursor PCDHB9 0.724 protocadherin beta 9 precursor PCDHB7 0.724 protocadherin beta 7 precursor PCDHB10 0.722 protocadherin beta 10 precursor PCDHB6 0.711 protocadherin beta 6 precursor PCDHB1 0.483 protocadherin beta 1 precursor PCDHGA5 0.399 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA5 0.399 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA1 0.397 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA1 0.397 protocadherin gamma subfamily A, 1 isoform 2 precurs... PCDHGA11 0.397 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA11 0.397 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA10 0.397 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.397 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA7 0.395 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.395 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGA4 0.395 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA4 0.395 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA9 0.389 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA9 0.389 protocadherin gamma subfamily A, 9 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.