Guide to the Human Genome
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Name: SLC30A9 Sequence: fasta or formatted (568aa) NCBI GI: 57164948
Description:

solute carrier family 30 (zinc transporter), member 9

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         39           5
 C cysteine            1.9         11           1
 D aspartate           3.5         20           1
 E glutamate           7.7         44           2
 F phenylalanine       3.9         22           2
 G glycine             7.0         40           1
 H histidine           1.8         10           1
 I isoleucine          4.9         28           2
 K lysine              5.6         32           2
 L leucine            11.6         66           2
 M methionine          2.5         14           2
 N asparagine          3.7         21           2
 P proline             3.9         22           1
 Q glutamine           3.7         21           1
 R arginine            6.7         38           3
 S serine              8.3         47           2
 T threonine           5.3         30           1
 V valine              7.0         40           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 30 (zinc transporter), member ... 
XPA                   0.024   xeroderma pigmentosum, complementation group A 
CCDC40                0.009   coiled-coil domain containing 40 
CEP110                0.008   centrosomal protein 110kDa 
NEXN                  0.007   nexilin (F actin binding protein) 
FAM129C               0.007   B-cell novel protein 1 isoform b 
FAM129C               0.007   B-cell novel protein 1 isoform a 
SLC30A4               0.006   solute carrier family 30 (zinc transporter), member ...
SLC30A5               0.006   solute carrier family 30 (zinc transporter), member ...
PDZRN4                0.006   PDZ domain containing RING finger 4 
LMO7                  0.005   LIM domain only 7 isoform 1 
SFRS17A               0.005   DNA segment on chromosome X and Y (unique) 155 expre...
LMO7                  0.005   LIM domain only 7 isoform 2 
ADRBK1                0.005   beta-adrenergic receptor kinase 1 
EVPL                  0.005   envoplakin 
TCHH                  0.005   trichohyalin 
CUGBP2                0.005   CUG triplet repeat, RNA binding protein 2 isoform 4...
CUGBP2                0.005   CUG triplet repeat, RNA binding protein 2 isoform 3 ...
GOLGA4                0.005   golgi autoantigen, golgin subfamily a, 4 
LRP2BP                0.005   LRP2 binding protein 
CCDC138               0.005   coiled-coil domain containing 138 
CCDC83                0.005   coiled-coil domain containing 83 
MAP2                  0.005   microtubule-associated protein 2 isoform 1 
NIN                   0.005   ninein isoform 4 
NIN                   0.005   ninein isoform 5 
NIN                   0.005   ninein isoform 1 
NIN                   0.005   ninein isoform 2 
CCDC88B               0.005   coiled-coil domain containing 88 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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