CCDC40 4610

Name: CCDC40	Sequence: fasta or formatted (1142aa)		NCBI GI: 148664197
Description: coiled-coil domain containing 40		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 87 3 C cysteine 0.5 6 1 D aspartate 4.8 55 2 E glutamate 13.5 154 3 F phenylalanine 1.5 17 1 G glycine 4.5 51 2 H histidine 2.6 30 2 I isoleucine 4.3 49 1 K lysine 7.3 83 3 L leucine 10.6 121 2 M methionine 2.9 33 2 N asparagine 2.7 31 2 P proline 2.7 31 2 Q glutamine 8.6 98 2 R arginine 6.5 74 2 S serine 6.3 72 3 T threonine 5.9 67 2 V valine 5.4 62 2 W tryptophan 0.3 3 1 Y tyrosine 1.6 18 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 40 MYH11 0.043 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.043 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.043 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.043 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH9 0.042 myosin, heavy polypeptide 9, non-muscle MYH10 0.041 myosin, heavy polypeptide 10, non-muscle MYH15 0.039 myosin, heavy polypeptide 15 EEA1 0.038 early endosome antigen 1, 162kD CROCC 0.037 ciliary rootlet coiled-coil MYH6 0.037 myosin heavy chain 6 CEP250 0.036 centrosomal protein 2 MYO18A 0.035 myosin 18A isoform b MYO18A 0.035 myosin 18A isoform a CCDC18 0.035 sarcoma antigen NY-SAR-41 MYH14 0.034 myosin, heavy chain 14 isoform 1 MYH14 0.034 myosin, heavy chain 14 isoform 2 MYH14 0.034 myosin, heavy chain 14 isoform 3 MYH1 0.034 myosin, heavy chain 1, skeletal muscle, adult [Homo... GOLGB1 0.034 golgi autoantigen, golgin subfamily b, macrogolgin ... GOLGA3 0.034 Golgi autoantigen, golgin subfamily a, 3 MYH4 0.034 myosin, heavy polypeptide 4, skeletal muscle CENPE 0.034 centromere protein E CENPF 0.034 centromere protein F GOLGA4 0.034 golgi autoantigen, golgin subfamily a, 4 MYH3 0.033 myosin, heavy chain 3, skeletal muscle, embryonic [H... PLEC1 0.033 plectin 1 isoform 11 PLEC1 0.033 plectin 1 isoform 10 PLEC1 0.033 plectin 1 isoform 8 PLEC1 0.033 plectin 1 isoform 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.