CCDC138 13200

Name: CCDC138	Sequence: fasta or formatted (665aa)		NCBI GI: 21450665
Description: coiled-coil domain containing 138		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 27 2 C cysteine 2.0 13 2 D aspartate 5.0 33 2 E glutamate 8.1 54 3 F phenylalanine 4.5 30 2 G glycine 3.2 21 2 H histidine 2.9 19 2 I isoleucine 4.5 30 2 K lysine 10.1 67 2 L leucine 13.4 89 2 M methionine 1.5 10 1 N asparagine 3.8 25 1 P proline 3.9 26 2 Q glutamine 5.9 39 2 R arginine 4.5 30 2 S serine 9.6 64 2 T threonine 5.4 36 2 V valine 5.3 35 2 W tryptophan 0.5 3 1 Y tyrosine 2.1 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 138 CGNL1 0.025 cingulin-like 1 CEP120 0.020 coiled-coil domain containing 100 DST 0.020 dystonin isoform 1e precursor GOLGA4 0.020 golgi autoantigen, golgin subfamily a, 4 RPGRIP1L 0.020 RPGRIP1-like isoform b RPGRIP1L 0.020 RPGRIP1-like isoform a NIN 0.020 ninein isoform 4 NIN 0.020 ninein isoform 5 NIN 0.020 ninein isoform 1 NIN 0.020 ninein isoform 2 HOOK3 0.019 golgi-associated microtubule-binding protein HOOK3 [... SMC1A 0.019 structural maintenance of chromosomes 1A TPM2 0.018 tropomyosin 2 (beta) isoform 3 CEP110 0.018 centrosomal protein 110kDa SYCP1 0.018 synaptonemal complex protein 1 TPM2 0.017 tropomyosin 2 (beta) isoform 2 CCDC88A 0.017 coiled-coil domain containing 88A isoform 2 CCDC88A 0.017 coiled-coil domain containing 88A isoform 1 KIF3A 0.016 kinesin family member 3A GBP4 0.016 guanylate binding protein 4 EEA1 0.016 early endosome antigen 1, 162kD KIF21A 0.016 kinesin family member 21A ERC1 0.016 RAB6-interacting protein 2 isoform epsilon ERC1 0.016 RAB6-interacting protein 2 isoform delta KTN1 0.016 kinectin 1 isoform c LOC400352 0.016 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.016 PREDICTED: similar to Putative golgin subfamily A m... GOLGB1 0.016 golgi autoantigen, golgin subfamily b, macrogolgin ... LOC645202 0.015 PREDICTED: hypothetical protein LOC645202 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.