CCDC83 27417

Name: CCDC83	Sequence: fasta or formatted (444aa)		NCBI GI: 40255180
Description: coiled-coil domain containing 83		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.6 16 2 C cysteine 1.1 5 1 D aspartate 5.4 24 1 E glutamate 14.2 63 2 F phenylalanine 1.8 8 1 G glycine 2.3 10 1 H histidine 3.4 15 1 I isoleucine 5.6 25 2 K lysine 11.5 51 2 L leucine 11.9 53 4 M methionine 2.9 13 2 N asparagine 4.3 19 1 P proline 3.8 17 2 Q glutamine 3.8 17 1 R arginine 4.3 19 2 S serine 6.8 30 3 T threonine 4.1 18 1 V valine 4.5 20 2 W tryptophan 1.6 7 1 Y tyrosine 3.2 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 83 MYH13 0.040 myosin, heavy polypeptide 13, skeletal muscle [Homo... C14orf45 0.035 hypothetical protein LOC80127 SYCP1 0.033 synaptonemal complex protein 1 GOLGA4 0.028 golgi autoantigen, golgin subfamily a, 4 CCDC46 0.028 coiled-coil domain containing 46 isoform a LOC283685 0.028 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC400352 0.028 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.028 PREDICTED: similar to Putative golgin subfamily A m... CAGE1 0.027 cancer antigen 1 LOC283767 0.025 golgi autoantigen, golgin subfamily a-like ROCK1 0.025 Rho-associated, coiled-coil containing protein kinase... LOC727832 0.025 golgi autoantigen, golgin subfamily a-like LOC440243 0.025 PREDICTED: Putative golgin subfamily A member 6-lik... LOC100133758 0.025 PREDICTED: hypothetical protein, partial LOC645202 0.024 PREDICTED: hypothetical protein LOC645202 KIF20B 0.024 M-phase phosphoprotein 1 CCDC146 0.024 coiled-coil domain containing 146 LOC283685 0.023 PREDICTED: golgi autoantigen, golgin subfamily a-li... CCDC88A 0.023 coiled-coil domain containing 88A isoform 2 CCDC88A 0.023 coiled-coil domain containing 88A isoform 1 KIF3B 0.023 kinesin family member 3B RABGAP1 0.022 RAB GTPase activating protein 1 PCNT 0.022 pericentrin RAD50 0.022 RAD50 homolog isoform 2 RAD50 0.022 RAD50 homolog isoform 1 MYH4 0.022 myosin, heavy polypeptide 4, skeletal muscle GCC2 0.021 GRIP and coiled-coil domain-containing 2 EIF5B 0.021 eukaryotic translation initiation factor 5B TRIP11 0.021 thyroid hormone receptor interactor 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.