Guide to the Human Genome
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Name: EVPL Sequence: fasta or formatted (2033aa) NCBI GI: 156104874
Description:

envoplakin

Referenced in:

Skin and Related Tissues
Spectrin and Plectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7        177           3
 C cysteine            1.1         23           1
 D aspartate           4.8         97           2
 E glutamate          11.6        236           3
 F phenylalanine       1.1         22           2
 G glycine             4.3         87           2
 H histidine           1.7         35           1
 I isoleucine          3.1         63           2
 K lysine              6.8        139           2
 L leucine            12.1        245           4
 M methionine          1.0         21           1
 N asparagine          1.5         30           2
 P proline             4.3         88           2
 Q glutamine           9.7        197           3
 R arginine            9.1        185           3
 S serine              6.6        134           3
 T threonine           3.9         80           3
 V valine              6.1        125           3
 W tryptophan          0.7         14           1
 Y tyrosine            1.7         35           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   envoplakin 
PPL                   0.207   periplakin 
EVPLL                 0.090   envoplakin-like 
PLEC1                 0.085   plectin 1 isoform 11 
PLEC1                 0.085   plectin 1 isoform 10 
PLEC1                 0.085   plectin 1 isoform 8 
PLEC1                 0.085   plectin 1 isoform 7 
PLEC1                 0.085   plectin 1 isoform 6 
PLEC1                 0.085   plectin 1 isoform 3 
PLEC1                 0.085   plectin 1 isoform 2 
PLEC1                 0.085   plectin 1 isoform 1 
DST                   0.072   dystonin isoform 1e precursor 
DSP                   0.056   desmoplakin isoform II 
DSP                   0.056   desmoplakin isoform I 
DST                   0.048   dystonin isoform 4 
DST                   0.048   dystonin isoform 3 
DST                   0.048   dystonin isoform 2 
DST                   0.048   dystonin isoform 1 
DST                   0.048   dystonin isoform 1eA precursor 
LOC652460             0.038   PREDICTED: similar to plectin 1, partial 
TCHH                  0.034   trichohyalin 
NUMA1                 0.034   nuclear mitotic apparatus protein 1 
MYH9                  0.034   myosin, heavy polypeptide 9, non-muscle 
MACF1                 0.033   microfilament and actin filament cross-linker protei...
MYH11                 0.031   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.031   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.031   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.031   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CEP250                0.030   centrosomal protein 2 
MYH10                 0.030   myosin, heavy polypeptide 10, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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