XPA 29677

Name: XPA	Sequence: fasta or formatted (273aa)		NCBI GI: 4507937
Description: xeroderma pigmentosum, complementation group A		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 27 4 C cysteine 2.6 7 1 D aspartate 5.5 15 2 E glutamate 12.5 34 7 F phenylalanine 2.2 6 1 G glycine 4.8 13 3 H histidine 2.9 8 2 I isoleucine 3.7 10 2 K lysine 10.6 29 2 L leucine 8.1 22 2 M methionine 4.0 11 1 N asparagine 2.2 6 1 P proline 4.4 12 2 Q glutamine 4.4 12 1 R arginine 6.2 17 2 S serine 3.3 9 2 T threonine 3.7 10 1 V valine 5.1 14 2 W tryptophan 1.1 3 1 Y tyrosine 2.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 xeroderma pigmentosum, complementation group A SLC30A9 0.049 solute carrier family 30 (zinc transporter), member ... LOC727832 0.021 golgi autoantigen, golgin subfamily a-like LOC283767 0.021 golgi autoantigen, golgin subfamily a-like CALD1 0.019 caldesmon 1 isoform 5 CALD1 0.019 caldesmon 1 isoform 4 CALD1 0.019 caldesmon 1 isoform 3 CALD1 0.019 caldesmon 1 isoform 2 CALD1 0.019 caldesmon 1 isoform 1 LOC283685 0.017 PREDICTED: golgi autoantigen, golgin subfamily a-li... CALR 0.017 calreticulin precursor LOC400352 0.015 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.015 PREDICTED: similar to Putative golgin subfamily A m... SCAPER 0.015 S-phase cyclin A-associated protein in the ER isofo... SCAPER 0.015 S-phase cyclin A-associated protein in the ER isofo... CC2D2A 0.015 coiled-coil and C2 domain containing 2A isoform a [... CC2D2A 0.015 coiled-coil and C2 domain containing 2A isoform b [... ZNF107 0.015 zinc finger protein 107 ZNF107 0.015 zinc finger protein 107 GNAT2 0.013 guanine nucleotide binding protein, alpha transducin... MYH3 0.013 myosin, heavy chain 3, skeletal muscle, embryonic [H... LOC100134067 0.013 PREDICTED: hypothetical protein LOC440243 0.013 PREDICTED: Putative golgin subfamily A member 6-lik... ZNF275 0.011 zinc finger protein 275 BAZ1B 0.011 bromodomain adjacent to zinc finger domain, 1B [Homo... LOC100287429 0.011 PREDICTED: hypothetical protein XP_002343926 isofor... LOC100287429 0.011 PREDICTED: hypothetical protein XP_002343925 isofor... LOC100287429 0.011 PREDICTED: hypothetical protein XP_002343927 isofor... PMFBP1 0.011 polyamine modulated factor 1 binding protein 1 isof... PMFBP1 0.011 polyamine modulated factor 1 binding protein 1 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.