| Name: PSD | Sequence: fasta or formatted (1024aa) | NCBI GI: 56790299 | |
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Description: pleckstrin and Sec7 domain containing
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.3 105 2 C cysteine 1.1 11 1 D aspartate 4.7 48 3 E glutamate 7.5 77 4 F phenylalanine 3.2 33 2 G glycine 9.3 95 2 H histidine 2.0 20 2 I isoleucine 1.8 18 1 K lysine 4.4 45 2 L leucine 9.8 100 2 M methionine 1.2 12 1 N asparagine 1.8 18 2 P proline 11.5 118 3 Q glutamine 3.4 35 1 R arginine 7.2 74 2 S serine 10.4 107 2 T threonine 3.9 40 1 V valine 3.8 39 2 W tryptophan 1.0 10 1 Y tyrosine 1.9 19 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 pleckstrin and Sec7 domain containing PSD2 0.294 pleckstrin and Sec7 domain containing 2 PSD3 0.274 ADP-ribosylation factor guanine nucleotide factor 6... PSD3 0.273 ADP-ribosylation factor guanine nucleotide factor 6 ... PSD4 0.218 pleckstrin and Sec7 domain containing 4 CYTH1 0.045 cytohesin 1 isoform 2 CYTH1 0.045 cytohesin 1 isoform 1 CYTH3 0.044 cytohesin 3 CYTH2 0.041 cytohesin 2 isoform 2 CYTH2 0.041 cytohesin 2 isoform 1 IQSEC2 0.038 IQ motif and Sec7 domain 2 isoform 2 IQSEC2 0.038 IQ motif and Sec7 domain 2 isoform1 GBF1 0.037 golgi-specific brefeldin A resistant guanine nucleoti... IQSEC3 0.037 IQ motif and Sec7 domain 3 CYTH4 0.035 cytohesin 4 ARFGEF1 0.032 brefeldin A-inhibited guanine nucleotide-exchange pr... IQSEC1 0.031 IQ motif and Sec7 domain 1 isoform a IQSEC1 0.031 IQ motif and Sec7 domain 1 isoform b ARFGEF2 0.028 ADP-ribosylation factor guanine nucleotide-exchange... FLJ22184 0.023 PREDICTED: hypothetical protein FLJ22184 NACA 0.022 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.021 PREDICTED: hypothetical protein LOC80164 COL5A2 0.021 alpha 2 type V collagen preproprotein MBD6 0.021 methyl-CpG binding domain protein 6 COL2A1 0.019 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.019 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A1 0.018 alpha 1 type V collagen preproprotein COL11A2 0.018 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.018 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.018 collagen, type XI, alpha 2 isoform 1 preproprotein ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
