Guide to the Human Genome
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Name: CYTH4 Sequence: fasta or formatted (394aa) NCBI GI: 7019505
Description:

cytohesin 4

Referenced in:

ADP-Ribosylation Factors
Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         19           1
 C cysteine            2.8         11           1
 D aspartate           7.1         28           2
 E glutamate           8.1         32           2
 F phenylalanine       5.8         23           2
 G glycine             5.1         20           2
 H histidine           1.8          7           1
 I isoleucine          6.3         25           2
 K lysine              7.4         29           3
 L leucine             9.4         37           2
 M methionine          1.8          7           2
 N asparagine          4.6         18           2
 P proline             5.1         20           2
 Q glutamine           4.6         18           1
 R arginine            6.9         27           2
 S serine              5.8         23           2
 T threonine           4.6         18           2
 V valine              4.1         16           2
 W tryptophan          1.5          6           1
 Y tyrosine            2.5         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytohesin 4 
CYTH3                 0.732   cytohesin 3 
CYTH2                 0.708   cytohesin 2 isoform 2 
CYTH1                 0.704   cytohesin 1 isoform 2 
CYTH2                 0.702   cytohesin 2 isoform 1 
CYTH1                 0.698   cytohesin 1 isoform 1 
ARFGEF1               0.197   brefeldin A-inhibited guanine nucleotide-exchange pr...
ARFGEF2               0.187   ADP-ribosylation factor guanine nucleotide-exchange...
IQSEC1                0.154   IQ motif and Sec7 domain 1 isoform a 
IQSEC1                0.154   IQ motif and Sec7 domain 1 isoform b 
GBF1                  0.146   golgi-specific brefeldin A resistant guanine nucleoti...
IQSEC2                0.145   IQ motif and Sec7 domain 2 isoform 2 
IQSEC2                0.145   IQ motif and Sec7 domain 2 isoform1 
IQSEC3                0.140   IQ motif and Sec7 domain 3 
PSD4                  0.095   pleckstrin and Sec7 domain containing 4 
PSD2                  0.094   pleckstrin and Sec7 domain containing 2 
PSD3                  0.091   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.091   ADP-ribosylation factor guanine nucleotide factor 6...
PSD                   0.091   pleckstrin and Sec7 domain containing 
FBXO8                 0.080   F-box only protein 8 
ARHGAP24              0.049   Rho GTPase activating protein 24 isoform 1 
FAM109A               0.038   hypothetical protein LOC144717 
DEF6                  0.037   differentially expressed in FDCP 6 homolog 
ARHGAP22              0.036   Rho GTPase activating protein 2 
SWAP70                0.034   SWAP-70 protein 
PLEKHA6               0.034   phosphoinositol 3-phosphate-binding protein-3 
PLEK                  0.034   pleckstrin 
DAPP1                 0.033   dual adaptor of phosphotyrosine and 3-phosphoinosit...
CNKSR1                0.032   connector enhancer of kinase suppressor of Ras 1 [H...
PLEKHH1               0.032   pleckstrin homology domain containing, family H (wit...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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