Guide to the Human Genome
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Name: CYTH1 Sequence: fasta or formatted (397aa) NCBI GI: 110349763
Description:

cytohesin 1 isoform 2

Referenced in:

ADP-Ribosylation Factors
Inositol Pathways

Other entries for this name:
alt prot [398aa] cytohesin 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         21           2
 C cysteine            2.0          8           1
 D aspartate           6.8         27           2
 E glutamate          10.6         42           2
 F phenylalanine       4.8         19           2
 G glycine             4.8         19           2
 H histidine           1.5          6           1
 I isoleucine          6.5         26           2
 K lysine              8.1         32           3
 L leucine             9.1         36           2
 M methionine          2.3          9           2
 N asparagine          6.8         27           2
 P proline             4.0         16           1
 Q glutamine           3.8         15           1
 R arginine            6.8         27           3
 S serine              3.5         14           2
 T threonine           4.8         19           2
 V valine              4.3         17           2
 W tryptophan          1.3          5           1
 Y tyrosine            3.0         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytohesin 1 isoform 2 
CYTH1                 0.994   cytohesin 1 isoform 1 
CYTH2                 0.845   cytohesin 2 isoform 2 
CYTH3                 0.843   cytohesin 3 
CYTH2                 0.839   cytohesin 2 isoform 1 
CYTH4                 0.704   cytohesin 4 
ARFGEF1               0.220   brefeldin A-inhibited guanine nucleotide-exchange pr...
ARFGEF2               0.214   ADP-ribosylation factor guanine nucleotide-exchange...
IQSEC1                0.173   IQ motif and Sec7 domain 1 isoform a 
IQSEC1                0.173   IQ motif and Sec7 domain 1 isoform b 
IQSEC3                0.166   IQ motif and Sec7 domain 3 
GBF1                  0.157   golgi-specific brefeldin A resistant guanine nucleoti...
IQSEC2                0.155   IQ motif and Sec7 domain 2 isoform 2 
IQSEC2                0.155   IQ motif and Sec7 domain 2 isoform1 
PSD                   0.117   pleckstrin and Sec7 domain containing 
PSD3                  0.112   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.112   ADP-ribosylation factor guanine nucleotide factor 6...
PSD2                  0.110   pleckstrin and Sec7 domain containing 2 
PSD4                  0.109   pleckstrin and Sec7 domain containing 4 
FBXO8                 0.076   F-box only protein 8 
ARHGAP24              0.048   Rho GTPase activating protein 24 isoform 1 
PLEKHA1               0.046   pleckstrin homology domain containing, family A (pho...
PLEKHA1               0.046   pleckstrin homology domain containing, family A (pho...
DAPP1                 0.041   dual adaptor of phosphotyrosine and 3-phosphoinosit...
PLEKHA6               0.039   phosphoinositol 3-phosphate-binding protein-3 
PLEKHH2               0.038   pleckstrin homology domain containing, family H (wi...
FAM109A               0.038   hypothetical protein LOC144717 
DEF6                  0.037   differentially expressed in FDCP 6 homolog 
RASA1                 0.036   RAS p21 protein activator 1 isoform 1 
RASA1                 0.036   RAS p21 protein activator 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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