Guide to the Human Genome
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Name: CYTH3 Sequence: fasta or formatted (399aa) NCBI GI: 4758968
Description:

cytohesin 3

Referenced in:

ADP-Ribosylation Factors
Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         18           1
 C cysteine            1.5          6           1
 D aspartate           6.8         27           2
 E glutamate          10.8         43           2
 F phenylalanine       4.8         19           2
 G glycine             6.3         25           3
 H histidine           1.5          6           1
 I isoleucine          6.5         26           2
 K lysine              7.5         30           2
 L leucine             9.5         38           2
 M methionine          2.5         10           2
 N asparagine          5.8         23           1
 P proline             4.5         18           1
 Q glutamine           2.8         11           1
 R arginine            7.3         29           3
 S serine              4.5         18           2
 T threonine           4.3         17           2
 V valine              4.5         18           2
 W tryptophan          1.3          5           1
 Y tyrosine            3.0         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytohesin 3 
CYTH1                 0.842   cytohesin 1 isoform 2 
CYTH1                 0.835   cytohesin 1 isoform 1 
CYTH2                 0.819   cytohesin 2 isoform 2 
CYTH2                 0.812   cytohesin 2 isoform 1 
CYTH4                 0.731   cytohesin 4 
ARFGEF1               0.213   brefeldin A-inhibited guanine nucleotide-exchange pr...
ARFGEF2               0.205   ADP-ribosylation factor guanine nucleotide-exchange...
IQSEC1                0.172   IQ motif and Sec7 domain 1 isoform a 
IQSEC1                0.172   IQ motif and Sec7 domain 1 isoform b 
IQSEC3                0.167   IQ motif and Sec7 domain 3 
GBF1                  0.161   golgi-specific brefeldin A resistant guanine nucleoti...
IQSEC2                0.155   IQ motif and Sec7 domain 2 isoform 2 
IQSEC2                0.155   IQ motif and Sec7 domain 2 isoform1 
PSD3                  0.118   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.118   ADP-ribosylation factor guanine nucleotide factor 6...
PSD                   0.114   pleckstrin and Sec7 domain containing 
PSD2                  0.110   pleckstrin and Sec7 domain containing 2 
PSD4                  0.110   pleckstrin and Sec7 domain containing 4 
FBXO8                 0.081   F-box only protein 8 
ARHGAP24              0.047   Rho GTPase activating protein 24 isoform 1 
PLEKHA6               0.038   phosphoinositol 3-phosphate-binding protein-3 
FAM109A               0.038   hypothetical protein LOC144717 
PLEKHA1               0.037   pleckstrin homology domain containing, family A (pho...
PLEKHA1               0.037   pleckstrin homology domain containing, family A (pho...
ARHGAP22              0.037   Rho GTPase activating protein 2 
DAPP1                 0.034   dual adaptor of phosphotyrosine and 3-phosphoinosit...
PLEKHA7               0.034   pleckstrin homology domain containing, family A mem...
CNKSR1                0.034   connector enhancer of kinase suppressor of Ras 1 [H...
RASA1                 0.034   RAS p21 protein activator 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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