Guide to the Human Genome
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Name: PSD4 Sequence: fasta or formatted (1056aa) NCBI GI: 56788370
Description:

pleckstrin and Sec7 domain containing 4

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         81           3
 C cysteine            1.9         20           2
 D aspartate           4.5         48           2
 E glutamate           9.4         99           3
 F phenylalanine       2.5         26           2
 G glycine             7.8         82           2
 H histidine           3.5         37           2
 I isoleucine          1.9         20           2
 K lysine              3.9         41           3
 L leucine             9.6        101           2
 M methionine          1.4         15           2
 N asparagine          2.7         29           2
 P proline            10.4        110           2
 Q glutamine           5.1         54           1
 R arginine            5.8         61           2
 S serine              9.4         99           2
 T threonine           4.8         51           2
 V valine              3.8         40           2
 W tryptophan          2.4         25           1
 Y tyrosine            1.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin and Sec7 domain containing 4 
PSD                   0.205   pleckstrin and Sec7 domain containing 
PSD3                  0.199   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.199   ADP-ribosylation factor guanine nucleotide factor 6...
PSD2                  0.187   pleckstrin and Sec7 domain containing 2 
CYTH3                 0.040   cytohesin 3 
CYTH2                 0.039   cytohesin 2 isoform 2 
CYTH2                 0.039   cytohesin 2 isoform 1 
CYTH1                 0.039   cytohesin 1 isoform 2 
CYTH1                 0.039   cytohesin 1 isoform 1 
CYTH4                 0.034   cytohesin 4 
ARFGEF1               0.033   brefeldin A-inhibited guanine nucleotide-exchange pr...
IQSEC1                0.031   IQ motif and Sec7 domain 1 isoform a 
IQSEC1                0.031   IQ motif and Sec7 domain 1 isoform b 
ARFGEF2               0.029   ADP-ribosylation factor guanine nucleotide-exchange...
IQSEC3                0.029   IQ motif and Sec7 domain 3 
GBF1                  0.028   golgi-specific brefeldin A resistant guanine nucleoti...
IQSEC2                0.027   IQ motif and Sec7 domain 2 isoform 2 
IQSEC2                0.027   IQ motif and Sec7 domain 2 isoform1 
SPTBN2                0.020   spectrin, beta, non-erythrocytic 2 
SPTBN1                0.016   spectrin, beta, non-erythrocytic 1 isoform 1 
SPTB                  0.016   spectrin beta isoform a 
SPTBN4                0.013   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
ARHGAP23              0.013   Rho GTPase activating protein 23 
KIAA1602              0.013   hypothetical protein LOC57701 
FBXO8                 0.013   F-box only protein 8 
ZNF828                0.012   zinc finger protein 828 
MLL2                  0.011   myeloid/lymphoid or mixed-lineage leukemia 2 
WIPF1                 0.011   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.011   WAS/WASL interacting protein family, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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