Guide to the Human Genome
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Name: CYTH1 Sequence: fasta or formatted (398aa) NCBI GI: 4758964
Description:

cytohesin 1 isoform 1

Referenced in:

ADP-Ribosylation Factors
Inositol Pathways

Other entries for this name:
alt prot [397aa] cytohesin 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         21           2
 C cysteine            2.0          8           1
 D aspartate           6.8         27           2
 E glutamate          10.6         42           2
 F phenylalanine       4.8         19           2
 G glycine             5.0         20           3
 H histidine           1.5          6           1
 I isoleucine          6.5         26           2
 K lysine              8.0         32           3
 L leucine             9.0         36           2
 M methionine          2.3          9           2
 N asparagine          6.8         27           2
 P proline             4.0         16           1
 Q glutamine           3.8         15           1
 R arginine            6.8         27           3
 S serine              3.5         14           2
 T threonine           4.8         19           2
 V valine              4.3         17           2
 W tryptophan          1.3          5           1
 Y tyrosine            3.0         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytohesin 1 isoform 1 
CYTH1                 0.991   cytohesin 1 isoform 2 
CYTH2                 0.846   cytohesin 2 isoform 1 
CYTH2                 0.837   cytohesin 2 isoform 2 
CYTH3                 0.834   cytohesin 3 
CYTH4                 0.696   cytohesin 4 
ARFGEF1               0.219   brefeldin A-inhibited guanine nucleotide-exchange pr...
ARFGEF2               0.214   ADP-ribosylation factor guanine nucleotide-exchange...
IQSEC1                0.172   IQ motif and Sec7 domain 1 isoform a 
IQSEC1                0.172   IQ motif and Sec7 domain 1 isoform b 
IQSEC3                0.166   IQ motif and Sec7 domain 3 
GBF1                  0.157   golgi-specific brefeldin A resistant guanine nucleoti...
IQSEC2                0.154   IQ motif and Sec7 domain 2 isoform 2 
IQSEC2                0.154   IQ motif and Sec7 domain 2 isoform1 
PSD                   0.116   pleckstrin and Sec7 domain containing 
PSD3                  0.113   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.113   ADP-ribosylation factor guanine nucleotide factor 6...
PSD2                  0.110   pleckstrin and Sec7 domain containing 2 
PSD4                  0.109   pleckstrin and Sec7 domain containing 4 
FBXO8                 0.076   F-box only protein 8 
PLEKHA6               0.044   phosphoinositol 3-phosphate-binding protein-3 
ARHGAP24              0.042   Rho GTPase activating protein 24 isoform 1 
PLEKHA1               0.042   pleckstrin homology domain containing, family A (pho...
PLEKHA1               0.042   pleckstrin homology domain containing, family A (pho...
PLEKHA7               0.038   pleckstrin homology domain containing, family A mem...
RASA1                 0.038   RAS p21 protein activator 1 isoform 1 
RASA1                 0.038   RAS p21 protein activator 1 isoform 2 
CNKSR1                0.038   connector enhancer of kinase suppressor of Ras 1 [H...
DAPP1                 0.034   dual adaptor of phosphotyrosine and 3-phosphoinosit...
DEF6                  0.033   differentially expressed in FDCP 6 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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